Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05190

Experiment: R2A_PIPES pH 4.25

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.25
1,124,763	-				-0.7
1,124,763	-				-0.4
1,124,763	-				+0.5
1,124,844	+				+1.8
1,124,844	+				-1.2
1,124,845	-				+0.1
1,124,845	-				-0.9
1,124,863	+				+0.4
1,124,863	+				-1.2
1,124,863	+				-1.0
1,124,863	+				-0.1
1,124,863	+				+1.4
1,124,863	+				+0.1
1,124,864	-				-0.0
1,124,864	-				-0.9
1,124,864	-				+0.4
1,124,876	-				-0.4
1,124,876	-				-1.5
1,124,922	-				-0.9
1,124,922	-				-0.1
1,124,935	-				-0.2
1,124,935	-				-1.6
1,124,935	-				+1.3
1,124,935	-				+0.7
1,124,935	-				+0.1
1,124,949	+				+0.3
1,124,974	-				+0.1
1,124,974	-				-1.5
1,124,974	-				-0.1
1,125,079	+				-0.3
1,125,079	+				+1.0
1,125,079	+				+0.2
1,125,079	+				-1.8
1,125,079	+				-0.6
1,125,079	+				-0.9
1,125,109	+				-0.7
1,125,109	+				+1.1
1,125,205	+				-0.6
1,125,205	+				-0.5
1,125,205	+				+0.4
1,125,206	-				-1.2
1,125,206	-				-0.3
1,125,206	-				-0.3
1,125,206	-				-0.9
1,125,206	-				+0.1
1,125,206	-				-1.5
1,125,206	-				+1.1
1,125,206	-				-0.5
1,125,206	-				-2.0
1,125,206	-				-1.5
1,125,208	+				+0.5
1,125,208	+				+0.1
1,125,208	+				+0.7
1,125,209	-				-0.5
1,125,209	-				-0.9
1,125,272	+				+1.4
1,125,272	+				-0.8
1,125,272	+				-0.2
1,125,272	+				-0.6
1,125,272	+				-1.1
1,125,272	+				-0.1
1,125,272	+				-0.7
1,125,273	-				+0.5
1,125,273	-				-1.5
1,125,273	-				+1.1
1,125,273	-				-0.4
1,125,273	-				+0.6
1,125,273	-				-2.4
1,125,273	-				-1.2
1,125,273	-				+0.6
1,125,273	-				-0.6
1,125,273	-				+0.4
1,125,273	-				+0.1
1,125,273	-				+0.4
1,125,312	+				-3.1
1,125,312	+				-0.9
1,125,312	+				-0.1
1,125,313	-				-0.1
1,125,313	-				+0.8
1,125,313	-				-0.9
1,125,313	-				-1.8
1,125,431	+				+2.1
1,125,432	-				-1.1
1,125,459	+				-0.6
1,125,459	+				-0.7
1,125,459	+				+0.9
1,125,460	-				-1.3
1,125,460	-				-0.1
1,125,460	-				+1.1
1,125,479	-				-0.5
1,125,487	-				-0.0
1,125,487	-				+0.1
1,125,635	+				+1.1
1,125,635	+				+0.1
1,125,747	+				-0.3
1,125,747	+				-2.1
1,125,748	-				-1.7
1,125,768	-				+0.2
1,125,892	+		OKGIIK_05190	0.11	+0.4
1,125,892	+		OKGIIK_05190	0.11	-1.5
1,125,892	+		OKGIIK_05190	0.11	-1.2
1,125,892	+		OKGIIK_05190	0.11	+0.1
1,125,893	-		OKGIIK_05190	0.11	+0.5
1,125,893	-		OKGIIK_05190	0.11	+1.1
1,125,893	-		OKGIIK_05190	0.11	+1.0
1,125,893	-		OKGIIK_05190	0.11	+2.1
1,126,069	+		OKGIIK_05190	0.20	-0.1
1,126,069	+		OKGIIK_05190	0.20	-1.2
1,126,070	-		OKGIIK_05190	0.20	-0.7
1,126,070	-		OKGIIK_05190	0.20	+0.6
1,126,070	-		OKGIIK_05190	0.20	+0.0
1,126,070	-		OKGIIK_05190	0.20	-2.9
1,126,070	-		OKGIIK_05190	0.20	+0.0
1,126,070	-		OKGIIK_05190	0.20	-0.5
1,126,146	+		OKGIIK_05190	0.24	-0.9
1,126,146	+		OKGIIK_05190	0.24	-1.7
1,126,147	-		OKGIIK_05190	0.24	+0.6
1,126,147	-		OKGIIK_05190	0.24	-2.1
1,126,147	-		OKGIIK_05190	0.24	+0.3
1,126,157	+		OKGIIK_05190	0.25	-1.8
1,126,157	+		OKGIIK_05190	0.25	+0.7
1,126,157	+		OKGIIK_05190	0.25	-0.9
1,126,157	+		OKGIIK_05190	0.25	-0.3
1,126,157	+		OKGIIK_05190	0.25	-0.8
1,126,158	-		OKGIIK_05190	0.25	-2.6
1,126,158	-		OKGIIK_05190	0.25	-0.4
1,126,158	-		OKGIIK_05190	0.25	-0.3
1,126,158	-		OKGIIK_05190	0.25	-0.4
1,126,158	-		OKGIIK_05190	0.25	-0.3
1,126,253	-		OKGIIK_05190	0.30	+0.2
1,126,253	-		OKGIIK_05190	0.30	-0.3
1,126,294	+		OKGIIK_05190	0.32	-0.2
1,126,294	+		OKGIIK_05190	0.32	+0.2
1,126,294	+		OKGIIK_05190	0.32	-1.2
1,126,294	+		OKGIIK_05190	0.32	-2.1
1,126,295	-		OKGIIK_05190	0.32	-0.7
1,126,312	+		OKGIIK_05190	0.33	+0.7
1,126,312	+		OKGIIK_05190	0.33	-1.0
1,126,313	-		OKGIIK_05190	0.33	+0.8
1,126,325	+		OKGIIK_05190	0.34	+1.6
1,126,325	+		OKGIIK_05190	0.34	+0.5
1,126,326	-		OKGIIK_05190	0.34	-0.9
1,126,358	+		OKGIIK_05190	0.36	+0.3
1,126,358	+		OKGIIK_05190	0.36	-0.3
1,126,359	-		OKGIIK_05190	0.36	-0.7
1,126,359	-		OKGIIK_05190	0.36	-0.7
1,126,359	-		OKGIIK_05190	0.36	-2.5
1,126,359	-		OKGIIK_05190	0.36	+0.3
1,126,359	-		OKGIIK_05190	0.36	+0.9
1,126,359	-		OKGIIK_05190	0.36	+0.9
1,126,507	+		OKGIIK_05190	0.44	+0.5
1,126,507	+		OKGIIK_05190	0.44	-1.1
1,126,507	+		OKGIIK_05190	0.44	-2.8
1,126,507	+		OKGIIK_05190	0.44	-0.2
1,126,507	+		OKGIIK_05190	0.44	+0.5
1,126,507	+		OKGIIK_05190	0.44	+0.1
1,126,508	-		OKGIIK_05190	0.44	+0.8
1,126,508	-		OKGIIK_05190	0.44	-2.9
1,126,508	-		OKGIIK_05190	0.44	-0.0
1,126,508	-		OKGIIK_05190	0.44	+0.6
1,126,508	-		OKGIIK_05190	0.44	+0.0
1,126,508	-		OKGIIK_05190	0.44	+1.1
1,126,560	+		OKGIIK_05190	0.47	-0.1
1,126,560	+		OKGIIK_05190	0.47	-0.7
1,126,560	+		OKGIIK_05190	0.47	-1.2
1,126,560	+		OKGIIK_05190	0.47	+0.5
1,126,560	+		OKGIIK_05190	0.47	-1.9
1,126,561	-		OKGIIK_05190	0.47	-0.5
1,126,561	-		OKGIIK_05190	0.47	-1.9
1,126,561	-		OKGIIK_05190	0.47	+0.0
1,126,616	+		OKGIIK_05190	0.50	+1.0
1,126,616	+		OKGIIK_05190	0.50	-1.1
1,126,634	-		OKGIIK_05190	0.51	+0.5
1,126,634	-		OKGIIK_05190	0.51	-2.1
1,126,634	-		OKGIIK_05190	0.51	+0.9
1,126,637	+		OKGIIK_05190	0.51	+0.7
1,126,637	+		OKGIIK_05190	0.51	-2.1
1,126,637	+		OKGIIK_05190	0.51	-0.8
1,126,637	+		OKGIIK_05190	0.51	-2.0
1,126,638	-		OKGIIK_05190	0.51	+0.5
1,126,638	-		OKGIIK_05190	0.51	-0.6
1,126,638	-		OKGIIK_05190	0.51	+0.2
1,126,638	-		OKGIIK_05190	0.51	-1.1
1,126,662	+		OKGIIK_05190	0.52	-0.5
1,126,712	+		OKGIIK_05190	0.55	-0.0
1,126,713	-		OKGIIK_05190	0.55	+0.1
1,126,713	-		OKGIIK_05190	0.55	+2.1
1,126,713	-		OKGIIK_05190	0.55	-0.3
1,126,713	-		OKGIIK_05190	0.55	+1.1
1,126,736	+		OKGIIK_05190	0.56	-2.1
1,126,737	-		OKGIIK_05190	0.56	-0.1
1,126,907	+		OKGIIK_05190	0.65	+0.8
1,127,058	+		OKGIIK_05190	0.74	-0.1
1,127,058	+		OKGIIK_05190	0.74	-1.0
1,127,059	-		OKGIIK_05190	0.74	+0.9
1,127,073	+		OKGIIK_05190	0.74	-0.0
1,127,073	+		OKGIIK_05190	0.74	-1.4
1,127,074	-		OKGIIK_05190	0.75	+0.7
1,127,081	-		OKGIIK_05190	0.75	+0.4
1,127,093	+		OKGIIK_05190	0.76	-0.5
1,127,177	+		OKGIIK_05190	0.80	+0.3
1,127,177	+		OKGIIK_05190	0.80	+0.7
1,127,177	+		OKGIIK_05190	0.80	+0.3
1,127,178	-		OKGIIK_05190	0.80	+0.6
1,127,178	-		OKGIIK_05190	0.80	+0.4
1,127,468	-				+0.8
1,127,468	-				+1.0
1,127,509	+				-0.3
1,127,510	-				-0.1
1,127,510	-				+1.0
1,127,543	+				-0.3
1,127,544	-				-1.1
1,127,544	-				+0.2
1,127,544	-				-1.5
1,127,544	-				-1.9
1,127,544	-				-0.4
1,127,579	-				+0.7
1,127,678	+		OKGIIK_05195	0.14	+0.1
1,127,679	-		OKGIIK_05195	0.14	+0.3
1,127,762	+		OKGIIK_05195	0.22	+0.2
1,127,762	+		OKGIIK_05195	0.22	-1.5
1,127,831	+		OKGIIK_05195	0.30	+0.6
1,127,831	+		OKGIIK_05195	0.30	-0.1
1,127,831	+		OKGIIK_05195	0.30	-1.5
1,127,831	+		OKGIIK_05195	0.30	-0.3
1,127,831	+		OKGIIK_05195	0.30	-0.0
1,127,832	-		OKGIIK_05195	0.30	+0.2
1,127,832	-		OKGIIK_05195	0.30	-1.2
1,127,841	+		OKGIIK_05195	0.31	-1.2
1,127,841	+		OKGIIK_05195	0.31	-0.4
1,127,841	+		OKGIIK_05195	0.31	-1.1
1,127,842	-		OKGIIK_05195	0.31	+0.3
1,127,842	-		OKGIIK_05195	0.31	+0.5
1,127,885	+		OKGIIK_05195	0.35	-1.5
1,127,885	+		OKGIIK_05195	0.35	-0.1
1,127,885	+		OKGIIK_05195	0.35	-0.5
1,127,885	+		OKGIIK_05195	0.35	+0.4
1,127,886	-		OKGIIK_05195	0.36	-0.7
1,127,886	-		OKGIIK_05195	0.36	+1.3
1,127,886	-		OKGIIK_05195	0.36	+1.3
1,127,919	+		OKGIIK_05195	0.39	-0.3
1,127,919	+		OKGIIK_05195	0.39	+1.3
1,127,920	-		OKGIIK_05195	0.39	-0.4
1,127,920	-		OKGIIK_05195	0.39	-0.6
1,128,043	+		OKGIIK_05195	0.52	-0.3
1,128,044	-		OKGIIK_05195	0.52	+0.7
1,128,044	-		OKGIIK_05195	0.52	+0.2
1,128,044	-		OKGIIK_05195	0.52	-1.7
1,128,044	-		OKGIIK_05195	0.52	+0.2
1,128,044	-		OKGIIK_05195	0.52	-0.8
1,128,044	-		OKGIIK_05195	0.52	-0.6
1,128,052	+		OKGIIK_05195	0.53	+0.4
1,128,052	+		OKGIIK_05195	0.53	-2.1
1,128,052	+		OKGIIK_05195	0.53	+0.8
1,128,053	-		OKGIIK_05195	0.53	+0.6
1,128,053	-		OKGIIK_05195	0.53	-2.1
1,128,053	-		OKGIIK_05195	0.53	+0.7
1,128,102	+		OKGIIK_05195	0.58	-2.4
1,128,102	+		OKGIIK_05195	0.58	-1.2
1,128,103	-		OKGIIK_05195	0.59	-0.9
1,128,103	-		OKGIIK_05195	0.59	+0.6
1,128,211	+		OKGIIK_05195	0.70	-0.3
1,128,212	-		OKGIIK_05195	0.70	-0.4
1,128,212	-		OKGIIK_05195	0.70	+0.1
1,128,212	-		OKGIIK_05195	0.70	+1.0
1,128,215	+		OKGIIK_05195	0.70	-0.3
1,128,215	+		OKGIIK_05195	0.70	-0.8
1,128,215	+		OKGIIK_05195	0.70	-1.2
1,128,215	+		OKGIIK_05195	0.70	+0.8
1,128,216	-		OKGIIK_05195	0.70	-0.4
1,128,216	-		OKGIIK_05195	0.70	-2.2
1,128,216	-		OKGIIK_05195	0.70	+0.1
1,128,216	-		OKGIIK_05195	0.70	-2.1
1,128,216	-		OKGIIK_05195	0.70	-0.3
1,128,216	-		OKGIIK_05195	0.70	-1.4
1,128,216	-		OKGIIK_05195	0.70	-1.0
1,128,250	+		OKGIIK_05195	0.74	+0.4
1,128,327	-		OKGIIK_05195	0.82	-0.3
1,128,410	+				+0.5
1,128,410	+				+1.3
1,128,410	+				+0.5
1,128,410	+				+0.6
1,128,410	+				-0.1
1,128,411	-				-3.3
1,128,411	-				-0.3
1,128,411	-				+0.8
1,128,411	-				-0.5
1,128,411	-				+0.1
1,128,411	-				-0.9
1,128,413	+				+0.3
1,128,413	+				-0.3
1,128,413	+				+0.1
1,128,413	+				+1.1
1,128,413	+				+1.1
1,128,413	+				+0.7
1,128,413	+				-0.0
1,128,413	+				-0.4
1,128,413	+				+0.3
1,128,413	+				-1.2
1,128,413	+				+0.8
1,128,414	-				-2.0
1,128,414	-				+0.5
1,128,414	-				-1.0
1,128,414	-				+0.1
1,128,418	+				+0.8
1,128,418	+				-0.7
1,128,418	+				+0.1
1,128,418	+				-0.0
1,128,419	-				-0.6
1,128,419	-				+0.1