Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2476 and GFF2477 overlap by 1 nucleotides GFF2477 and GFF2478 are separated by 12 nucleotides GFF2478 and GFF2479 are separated by 43 nucleotides GFF2479 and GFF2480 are separated by 91 nucleotides
GFF2476 - Protein-glutamate methylesterase/protein-glutamine glutaminase 1, at 264,314 to 265,459
GFF2476
GFF2477 - Chemotaxis protein PomA, at 265,459 to 266,199
GFF2477
GFF2478 - Motility protein B, at 266,212 to 267,102
GFF2478
GFF2479 - Sporulation initiation inhibitor protein Soj, at 267,146 to 267,934
GFF2479
GFF2480 - hypothetical protein, at 268,026 to 268,979
GFF2480
Position (kb) 266
267
268 Strain fitness (log2 ratio) -1
0
1 at 265.364 kb on + strand at 265.364 kb on + strand at 265.412 kb on + strand at 265.412 kb on + strand at 265.412 kb on + strand at 265.412 kb on + strand at 265.413 kb on - strand at 265.413 kb on - strand at 265.413 kb on - strand at 265.413 kb on - strand at 265.413 kb on - strand at 265.453 kb on + strand at 265.453 kb on + strand at 265.454 kb on - strand at 265.454 kb on - strand at 265.454 kb on - strand at 265.476 kb on + strand at 265.519 kb on + strand at 265.519 kb on + strand at 265.777 kb on + strand, within GFF2477 at 265.777 kb on + strand, within GFF2477 at 265.856 kb on - strand, within GFF2477 at 265.995 kb on + strand, within GFF2477 at 266.029 kb on + strand, within GFF2477 at 266.029 kb on + strand, within GFF2477 at 266.029 kb on + strand, within GFF2477 at 266.029 kb on + strand, within GFF2477 at 266.030 kb on - strand, within GFF2477 at 266.030 kb on - strand, within GFF2477 at 266.030 kb on - strand, within GFF2477 at 266.030 kb on - strand, within GFF2477 at 266.030 kb on - strand, within GFF2477 at 266.198 kb on - strand at 266.206 kb on - strand at 266.315 kb on - strand, within GFF2478 at 266.315 kb on - strand, within GFF2478 at 266.344 kb on + strand, within GFF2478 at 266.344 kb on + strand, within GFF2478 at 266.345 kb on - strand, within GFF2478 at 266.345 kb on - strand, within GFF2478 at 266.345 kb on - strand, within GFF2478 at 266.380 kb on - strand, within GFF2478 at 267.092 kb on + strand at 267.093 kb on - strand at 267.093 kb on - strand at 267.210 kb on + strand at 267.211 kb on - strand at 267.284 kb on + strand, within GFF2479 at 267.285 kb on - strand, within GFF2479 at 267.285 kb on - strand, within GFF2479 at 267.285 kb on - strand, within GFF2479 at 267.323 kb on + strand, within GFF2479 at 267.323 kb on + strand, within GFF2479 at 267.323 kb on + strand, within GFF2479 at 267.323 kb on + strand, within GFF2479 at 267.324 kb on - strand, within GFF2479 at 267.324 kb on - strand, within GFF2479 at 267.788 kb on + strand, within GFF2479 at 267.789 kb on - strand, within GFF2479 at 267.789 kb on - strand, within GFF2479 at 267.789 kb on - strand, within GFF2479 at 268.077 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 265,364 + +0.5 265,364 + -0.2 265,412 + -0.2 265,412 + +0.1 265,412 + +0.9 265,412 + +0.4 265,413 - -1.2 265,413 - -0.4 265,413 - +0.3 265,413 - +0.2 265,413 - +0.7 265,453 + -0.1 265,453 + +0.0 265,454 - +0.7 265,454 - -1.2 265,454 - +0.8 265,476 + +0.6 265,519 + +0.9 265,519 + -0.3 265,777 + GFF2477 0.43 +1.6 265,777 + GFF2477 0.43 +0.2 265,856 - GFF2477 0.54 -0.3 265,995 + GFF2477 0.72 +1.0 266,029 + GFF2477 0.77 +0.9 266,029 + GFF2477 0.77 -0.2 266,029 + GFF2477 0.77 +0.6 266,029 + GFF2477 0.77 -0.0 266,030 - GFF2477 0.77 +0.4 266,030 - GFF2477 0.77 +0.7 266,030 - GFF2477 0.77 -0.9 266,030 - GFF2477 0.77 +0.2 266,030 - GFF2477 0.77 +0.2 266,198 - -0.1 266,206 - +0.5 266,315 - GFF2478 0.12 +0.3 266,315 - GFF2478 0.12 +0.6 266,344 + GFF2478 0.15 -0.1 266,344 + GFF2478 0.15 +0.4 266,345 - GFF2478 0.15 +0.1 266,345 - GFF2478 0.15 -0.4 266,345 - GFF2478 0.15 +0.0 266,380 - GFF2478 0.19 +0.4 267,092 + +0.0 267,093 - -0.3 267,093 - +0.2 267,210 + -0.9 267,211 - +0.4 267,284 + GFF2479 0.17 +0.0 267,285 - GFF2479 0.18 +0.8 267,285 - GFF2479 0.18 +1.3 267,285 - GFF2479 0.18 +1.5 267,323 + GFF2479 0.22 +0.9 267,323 + GFF2479 0.22 -1.7 267,323 + GFF2479 0.22 +0.5 267,323 + GFF2479 0.22 -1.4 267,324 - GFF2479 0.23 -0.6 267,324 - GFF2479 0.23 +0.1 267,788 + GFF2479 0.81 +0.1 267,789 - GFF2479 0.81 +0.3 267,789 - GFF2479 0.81 +0.7 267,789 - GFF2479 0.81 -0.4 268,077 + -0.6
Or see this region's nucleotide sequence