Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02005

Experiment: Ammonium Nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02004 and MPMX26_02005 are separated by 116 nucleotidesMPMX26_02005 and MPMX26_02006 are separated by 249 nucleotides MPMX26_02004: MPMX26_02004 - Gamma-glutamylputrescine oxidoreductase, at 2,065,313 to 2,066,728 _02004 MPMX26_02005: MPMX26_02005 - hypothetical protein, at 2,066,845 to 2,068,092 _02005 MPMX26_02006: MPMX26_02006 - HTH-type transcriptional regulatory protein GabR, at 2,068,342 to 2,069,829 _02006 Position (kb) 2066 2067 2068 2069Strain fitness (log2 ratio) -1 0 1at 2066.470 kb on - strand, within MPMX26_02004at 2068.045 kb on - strandat 2068.226 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium Nitrate (N)
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2,066,470 - MPMX26_02004 0.82 +0.5
2,068,045 - +0.4
2,068,226 - -0.1

Or see this region's nucleotide sequence