Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01242

Experiment: Ammonium Nitrate (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_01240 and MPMX26_01241 are separated by 90 nucleotidesMPMX26_01241 and MPMX26_01242 are separated by 113 nucleotidesMPMX26_01242 and MPMX26_01243 are separated by 126 nucleotides MPMX26_01240: MPMX26_01240 - hypothetical protein, at 1,309,820 to 1,310,476 _01240 MPMX26_01241: MPMX26_01241 - HTH-type transcriptional regulator SutR, at 1,310,567 to 1,311,115 _01241 MPMX26_01242: MPMX26_01242 - Orotidine 5'-phosphate decarboxylase, at 1,311,229 to 1,311,909 _01242 MPMX26_01243: MPMX26_01243 - hypothetical protein, at 1,312,036 to 1,312,944 _01243 Position (kb) 1311 1312Strain fitness (log2 ratio) -3 -2 -1 0 1at 1310.597 kb on + strandat 1310.629 kb on + strand, within MPMX26_01241at 1310.629 kb on + strand, within MPMX26_01241at 1310.639 kb on + strand, within MPMX26_01241at 1310.639 kb on + strand, within MPMX26_01241at 1310.642 kb on + strand, within MPMX26_01241at 1310.657 kb on + strand, within MPMX26_01241at 1310.683 kb on + strand, within MPMX26_01241at 1310.683 kb on + strand, within MPMX26_01241at 1310.738 kb on + strand, within MPMX26_01241at 1310.738 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.770 kb on + strand, within MPMX26_01241at 1310.818 kb on + strand, within MPMX26_01241at 1310.888 kb on + strand, within MPMX26_01241at 1310.888 kb on + strand, within MPMX26_01241at 1310.888 kb on + strand, within MPMX26_01241at 1310.980 kb on + strand, within MPMX26_01241at 1310.980 kb on + strand, within MPMX26_01241at 1310.980 kb on + strand, within MPMX26_01241at 1310.980 kb on + strand, within MPMX26_01241at 1311.025 kb on + strand, within MPMX26_01241at 1311.092 kb on + strandat 1311.092 kb on + strandat 1311.092 kb on + strandat 1311.092 kb on + strandat 1311.092 kb on + strandat 1311.092 kb on + strandat 1311.340 kb on + strand, within MPMX26_01242at 1311.420 kb on + strand, within MPMX26_01242at 1311.439 kb on + strand, within MPMX26_01242at 1311.439 kb on + strand, within MPMX26_01242at 1311.535 kb on + strand, within MPMX26_01242at 1311.535 kb on + strand, within MPMX26_01242at 1311.535 kb on + strand, within MPMX26_01242at 1311.540 kb on + strand, within MPMX26_01242at 1311.540 kb on + strand, within MPMX26_01242at 1311.568 kb on + strand, within MPMX26_01242at 1311.568 kb on + strand, within MPMX26_01242at 1311.568 kb on + strand, within MPMX26_01242at 1311.568 kb on + strand, within MPMX26_01242at 1311.568 kb on + strand, within MPMX26_01242at 1311.568 kb on + strand, within MPMX26_01242at 1311.568 kb on + strand, within MPMX26_01242at 1311.568 kb on + strand, within MPMX26_01242at 1311.568 kb on + strand, within MPMX26_01242at 1311.633 kb on + strand, within MPMX26_01242at 1311.633 kb on + strand, within MPMX26_01242at 1311.633 kb on + strand, within MPMX26_01242at 1311.633 kb on + strand, within MPMX26_01242at 1311.633 kb on + strand, within MPMX26_01242at 1311.672 kb on + strand, within MPMX26_01242at 1311.672 kb on + strand, within MPMX26_01242at 1311.676 kb on + strand, within MPMX26_01242at 1311.681 kb on + strand, within MPMX26_01242at 1311.681 kb on + strand, within MPMX26_01242at 1311.681 kb on + strand, within MPMX26_01242at 1311.681 kb on + strand, within MPMX26_01242at 1311.681 kb on + strand, within MPMX26_01242at 1311.681 kb on + strand, within MPMX26_01242at 1311.681 kb on + strand, within MPMX26_01242at 1311.681 kb on + strand, within MPMX26_01242at 1311.765 kb on + strand, within MPMX26_01242at 1311.832 kb on + strand, within MPMX26_01242

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium Nitrate (N)
remove
1,310,597 + -2.0
1,310,629 + MPMX26_01241 0.11 +0.8
1,310,629 + MPMX26_01241 0.11 +0.3
1,310,639 + MPMX26_01241 0.13 +0.5
1,310,639 + MPMX26_01241 0.13 +0.1
1,310,642 + MPMX26_01241 0.14 +0.2
1,310,657 + MPMX26_01241 0.16 -0.1
1,310,683 + MPMX26_01241 0.21 +0.2
1,310,683 + MPMX26_01241 0.21 +0.6
1,310,738 + MPMX26_01241 0.31 +1.2
1,310,738 + MPMX26_01241 0.31 -0.7
1,310,770 + MPMX26_01241 0.37 +0.3
1,310,770 + MPMX26_01241 0.37 +0.5
1,310,770 + MPMX26_01241 0.37 +0.5
1,310,770 + MPMX26_01241 0.37 +0.9
1,310,770 + MPMX26_01241 0.37 +0.5
1,310,770 + MPMX26_01241 0.37 +0.3
1,310,770 + MPMX26_01241 0.37 -0.0
1,310,770 + MPMX26_01241 0.37 +0.2
1,310,770 + MPMX26_01241 0.37 +0.3
1,310,770 + MPMX26_01241 0.37 +0.2
1,310,770 + MPMX26_01241 0.37 +0.5
1,310,770 + MPMX26_01241 0.37 +0.5
1,310,770 + MPMX26_01241 0.37 +0.9
1,310,770 + MPMX26_01241 0.37 +0.5
1,310,770 + MPMX26_01241 0.37 +0.8
1,310,770 + MPMX26_01241 0.37 +1.1
1,310,770 + MPMX26_01241 0.37 +0.1
1,310,770 + MPMX26_01241 0.37 +1.1
1,310,770 + MPMX26_01241 0.37 +0.0
1,310,818 + MPMX26_01241 0.46 +0.4
1,310,888 + MPMX26_01241 0.58 +0.5
1,310,888 + MPMX26_01241 0.58 +0.7
1,310,888 + MPMX26_01241 0.58 -0.1
1,310,980 + MPMX26_01241 0.75 +0.5
1,310,980 + MPMX26_01241 0.75 +1.4
1,310,980 + MPMX26_01241 0.75 +0.2
1,310,980 + MPMX26_01241 0.75 +0.4
1,311,025 + MPMX26_01241 0.83 -0.0
1,311,092 + -0.5
1,311,092 + +0.4
1,311,092 + +0.5
1,311,092 + +0.0
1,311,092 + -0.3
1,311,092 + +0.3
1,311,340 + MPMX26_01242 0.16 -2.1
1,311,420 + MPMX26_01242 0.28 -1.7
1,311,439 + MPMX26_01242 0.31 -2.0
1,311,439 + MPMX26_01242 0.31 -2.6
1,311,535 + MPMX26_01242 0.45 +0.1
1,311,535 + MPMX26_01242 0.45 -1.3
1,311,535 + MPMX26_01242 0.45 -2.0
1,311,540 + MPMX26_01242 0.46 -1.7
1,311,540 + MPMX26_01242 0.46 -0.9
1,311,568 + MPMX26_01242 0.50 -1.1
1,311,568 + MPMX26_01242 0.50 -2.2
1,311,568 + MPMX26_01242 0.50 -1.1
1,311,568 + MPMX26_01242 0.50 -0.6
1,311,568 + MPMX26_01242 0.50 -1.4
1,311,568 + MPMX26_01242 0.50 -1.3
1,311,568 + MPMX26_01242 0.50 -1.3
1,311,568 + MPMX26_01242 0.50 -1.1
1,311,568 + MPMX26_01242 0.50 -1.1
1,311,633 + MPMX26_01242 0.59 -2.3
1,311,633 + MPMX26_01242 0.59 -1.4
1,311,633 + MPMX26_01242 0.59 -2.0
1,311,633 + MPMX26_01242 0.59 -2.7
1,311,633 + MPMX26_01242 0.59 -2.5
1,311,672 + MPMX26_01242 0.65 -2.6
1,311,672 + MPMX26_01242 0.65 +0.1
1,311,676 + MPMX26_01242 0.66 -1.7
1,311,681 + MPMX26_01242 0.66 -2.1
1,311,681 + MPMX26_01242 0.66 -1.9
1,311,681 + MPMX26_01242 0.66 -0.9
1,311,681 + MPMX26_01242 0.66 -2.0
1,311,681 + MPMX26_01242 0.66 -1.6
1,311,681 + MPMX26_01242 0.66 -1.4
1,311,681 + MPMX26_01242 0.66 -1.7
1,311,681 + MPMX26_01242 0.66 -0.6
1,311,765 + MPMX26_01242 0.79 -2.9
1,311,832 + MPMX26_01242 0.89 -2.8

Or see this region's nucleotide sequence