Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00466

Experiment: Ammonium Nitrate (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00465 and MPMX26_00466 are separated by 10 nucleotidesMPMX26_00466 and MPMX26_00467 are separated by 2 nucleotides MPMX26_00465: MPMX26_00465 - Toxin and drug export protein A, at 499,357 to 500,760 _00465 MPMX26_00466: MPMX26_00466 - Macrolide export ATP-binding/permease protein MacB, at 500,771 to 502,759 _00466 MPMX26_00467: MPMX26_00467 - Macrolide export protein MacA, at 502,762 to 504,102 _00467 Position (kb) 500 501 502 503Strain fitness (log2 ratio) -3 -2 -1 0 1at 499.779 kb on - strand, within MPMX26_00465at 499.827 kb on - strand, within MPMX26_00465at 499.932 kb on - strand, within MPMX26_00465at 499.932 kb on - strand, within MPMX26_00465at 499.969 kb on - strand, within MPMX26_00465at 499.974 kb on - strand, within MPMX26_00465at 499.974 kb on - strand, within MPMX26_00465at 499.974 kb on - strand, within MPMX26_00465at 500.089 kb on - strand, within MPMX26_00465at 500.104 kb on - strand, within MPMX26_00465at 500.104 kb on - strand, within MPMX26_00465at 500.142 kb on - strand, within MPMX26_00465at 500.142 kb on - strand, within MPMX26_00465at 500.142 kb on - strand, within MPMX26_00465at 500.142 kb on - strand, within MPMX26_00465at 500.142 kb on - strand, within MPMX26_00465at 500.142 kb on - strand, within MPMX26_00465at 500.142 kb on - strand, within MPMX26_00465at 500.142 kb on - strand, within MPMX26_00465at 500.149 kb on - strand, within MPMX26_00465at 500.149 kb on - strand, within MPMX26_00465at 500.193 kb on - strand, within MPMX26_00465at 500.223 kb on - strand, within MPMX26_00465at 500.267 kb on - strand, within MPMX26_00465at 500.317 kb on - strand, within MPMX26_00465at 500.317 kb on - strand, within MPMX26_00465at 500.338 kb on - strand, within MPMX26_00465at 500.361 kb on - strand, within MPMX26_00465at 500.373 kb on - strand, within MPMX26_00465at 500.378 kb on - strand, within MPMX26_00465at 500.409 kb on - strand, within MPMX26_00465at 500.418 kb on - strand, within MPMX26_00465at 500.428 kb on - strand, within MPMX26_00465at 500.443 kb on - strand, within MPMX26_00465at 500.454 kb on - strand, within MPMX26_00465at 500.499 kb on - strand, within MPMX26_00465at 500.520 kb on - strand, within MPMX26_00465at 500.520 kb on - strand, within MPMX26_00465at 500.520 kb on - strand, within MPMX26_00465at 500.520 kb on - strand, within MPMX26_00465at 500.520 kb on - strand, within MPMX26_00465at 500.538 kb on - strand, within MPMX26_00465at 500.560 kb on - strand, within MPMX26_00465at 500.592 kb on - strand, within MPMX26_00465at 500.592 kb on - strand, within MPMX26_00465at 500.592 kb on - strand, within MPMX26_00465at 500.592 kb on - strand, within MPMX26_00465at 500.592 kb on - strand, within MPMX26_00465at 500.757 kb on - strandat 500.804 kb on - strandat 500.804 kb on - strandat 500.869 kb on - strandat 500.987 kb on - strand, within MPMX26_00466at 500.996 kb on - strand, within MPMX26_00466at 501.026 kb on - strand, within MPMX26_00466at 501.044 kb on - strand, within MPMX26_00466at 501.144 kb on + strand, within MPMX26_00466at 501.154 kb on - strand, within MPMX26_00466at 501.162 kb on - strand, within MPMX26_00466at 501.236 kb on - strand, within MPMX26_00466at 501.246 kb on - strand, within MPMX26_00466at 501.346 kb on - strand, within MPMX26_00466at 501.349 kb on - strand, within MPMX26_00466at 501.349 kb on - strand, within MPMX26_00466at 501.354 kb on - strand, within MPMX26_00466at 501.359 kb on - strand, within MPMX26_00466at 501.361 kb on - strand, within MPMX26_00466at 501.410 kb on - strand, within MPMX26_00466at 501.433 kb on - strand, within MPMX26_00466at 501.443 kb on - strand, within MPMX26_00466at 501.457 kb on - strand, within MPMX26_00466at 501.598 kb on - strand, within MPMX26_00466at 501.664 kb on - strand, within MPMX26_00466at 501.685 kb on - strand, within MPMX26_00466at 501.890 kb on - strand, within MPMX26_00466at 501.940 kb on - strand, within MPMX26_00466at 501.946 kb on - strand, within MPMX26_00466at 501.963 kb on - strand, within MPMX26_00466at 501.973 kb on - strand, within MPMX26_00466at 501.973 kb on - strand, within MPMX26_00466at 501.973 kb on - strand, within MPMX26_00466at 501.973 kb on - strand, within MPMX26_00466at 502.024 kb on - strand, within MPMX26_00466at 502.085 kb on - strand, within MPMX26_00466at 502.214 kb on - strand, within MPMX26_00466at 502.392 kb on - strand, within MPMX26_00466at 502.402 kb on - strand, within MPMX26_00466at 502.696 kb on - strandat 502.905 kb on - strand, within MPMX26_00467at 502.905 kb on - strand, within MPMX26_00467at 502.905 kb on - strand, within MPMX26_00467at 502.957 kb on - strand, within MPMX26_00467at 503.104 kb on - strand, within MPMX26_00467at 503.121 kb on - strand, within MPMX26_00467at 503.142 kb on - strand, within MPMX26_00467at 503.152 kb on - strand, within MPMX26_00467at 503.152 kb on - strand, within MPMX26_00467at 503.182 kb on - strand, within MPMX26_00467at 503.182 kb on - strand, within MPMX26_00467at 503.182 kb on - strand, within MPMX26_00467at 503.182 kb on - strand, within MPMX26_00467at 503.182 kb on - strand, within MPMX26_00467at 503.182 kb on - strand, within MPMX26_00467at 503.182 kb on - strand, within MPMX26_00467at 503.182 kb on - strand, within MPMX26_00467at 503.196 kb on - strand, within MPMX26_00467at 503.250 kb on - strand, within MPMX26_00467at 503.250 kb on - strand, within MPMX26_00467at 503.250 kb on - strand, within MPMX26_00467at 503.320 kb on - strand, within MPMX26_00467at 503.320 kb on - strand, within MPMX26_00467at 503.320 kb on - strand, within MPMX26_00467at 503.340 kb on - strand, within MPMX26_00467at 503.401 kb on - strand, within MPMX26_00467at 503.523 kb on - strand, within MPMX26_00467at 503.533 kb on - strand, within MPMX26_00467at 503.565 kb on - strand, within MPMX26_00467at 503.701 kb on - strand, within MPMX26_00467

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium Nitrate (N)
remove
499,779 - MPMX26_00465 0.30 +0.7
499,827 - MPMX26_00465 0.33 +0.7
499,932 - MPMX26_00465 0.41 -0.4
499,932 - MPMX26_00465 0.41 +0.0
499,969 - MPMX26_00465 0.44 +0.4
499,974 - MPMX26_00465 0.44 +0.2
499,974 - MPMX26_00465 0.44 -0.5
499,974 - MPMX26_00465 0.44 +0.1
500,089 - MPMX26_00465 0.52 -1.0
500,104 - MPMX26_00465 0.53 +0.1
500,104 - MPMX26_00465 0.53 +0.2
500,142 - MPMX26_00465 0.56 +0.2
500,142 - MPMX26_00465 0.56 +0.8
500,142 - MPMX26_00465 0.56 +0.0
500,142 - MPMX26_00465 0.56 -0.0
500,142 - MPMX26_00465 0.56 +0.9
500,142 - MPMX26_00465 0.56 -0.4
500,142 - MPMX26_00465 0.56 +0.3
500,142 - MPMX26_00465 0.56 -2.7
500,149 - MPMX26_00465 0.56 +0.3
500,149 - MPMX26_00465 0.56 +1.4
500,193 - MPMX26_00465 0.60 +0.1
500,223 - MPMX26_00465 0.62 -0.0
500,267 - MPMX26_00465 0.65 +0.5
500,317 - MPMX26_00465 0.68 +0.5
500,317 - MPMX26_00465 0.68 -0.1
500,338 - MPMX26_00465 0.70 +0.2
500,361 - MPMX26_00465 0.72 +1.2
500,373 - MPMX26_00465 0.72 +0.8
500,378 - MPMX26_00465 0.73 +0.1
500,409 - MPMX26_00465 0.75 +0.1
500,418 - MPMX26_00465 0.76 -0.5
500,428 - MPMX26_00465 0.76 -0.6
500,443 - MPMX26_00465 0.77 +0.3
500,454 - MPMX26_00465 0.78 +0.9
500,499 - MPMX26_00465 0.81 -0.2
500,520 - MPMX26_00465 0.83 -0.3
500,520 - MPMX26_00465 0.83 -0.1
500,520 - MPMX26_00465 0.83 -1.2
500,520 - MPMX26_00465 0.83 +0.3
500,520 - MPMX26_00465 0.83 +0.6
500,538 - MPMX26_00465 0.84 +0.2
500,560 - MPMX26_00465 0.86 -0.1
500,592 - MPMX26_00465 0.88 +0.3
500,592 - MPMX26_00465 0.88 +0.4
500,592 - MPMX26_00465 0.88 +0.1
500,592 - MPMX26_00465 0.88 +0.5
500,592 - MPMX26_00465 0.88 -0.2
500,757 - +0.2
500,804 - -1.9
500,804 - +0.6
500,869 - -0.3
500,987 - MPMX26_00466 0.11 +1.4
500,996 - MPMX26_00466 0.11 -0.8
501,026 - MPMX26_00466 0.13 +0.9
501,044 - MPMX26_00466 0.14 +0.6
501,144 + MPMX26_00466 0.19 +0.1
501,154 - MPMX26_00466 0.19 +0.1
501,162 - MPMX26_00466 0.20 +0.3
501,236 - MPMX26_00466 0.23 +0.1
501,246 - MPMX26_00466 0.24 -1.3
501,346 - MPMX26_00466 0.29 +0.0
501,349 - MPMX26_00466 0.29 +0.4
501,349 - MPMX26_00466 0.29 +0.7
501,354 - MPMX26_00466 0.29 -0.9
501,359 - MPMX26_00466 0.30 -0.0
501,361 - MPMX26_00466 0.30 -0.3
501,410 - MPMX26_00466 0.32 +0.8
501,433 - MPMX26_00466 0.33 +1.1
501,443 - MPMX26_00466 0.34 +0.2
501,457 - MPMX26_00466 0.34 -1.3
501,598 - MPMX26_00466 0.42 +0.0
501,664 - MPMX26_00466 0.45 -0.9
501,685 - MPMX26_00466 0.46 +0.0
501,890 - MPMX26_00466 0.56 -1.2
501,940 - MPMX26_00466 0.59 -0.5
501,946 - MPMX26_00466 0.59 -1.1
501,963 - MPMX26_00466 0.60 +0.7
501,973 - MPMX26_00466 0.60 -0.2
501,973 - MPMX26_00466 0.60 +1.4
501,973 - MPMX26_00466 0.60 -0.2
501,973 - MPMX26_00466 0.60 -1.3
502,024 - MPMX26_00466 0.63 +0.1
502,085 - MPMX26_00466 0.66 -0.0
502,214 - MPMX26_00466 0.73 -0.5
502,392 - MPMX26_00466 0.81 -0.3
502,402 - MPMX26_00466 0.82 +0.1
502,696 - -0.1
502,905 - MPMX26_00467 0.11 +1.0
502,905 - MPMX26_00467 0.11 +0.5
502,905 - MPMX26_00467 0.11 -0.2
502,957 - MPMX26_00467 0.15 -0.1
503,104 - MPMX26_00467 0.26 +0.0
503,121 - MPMX26_00467 0.27 -1.5
503,142 - MPMX26_00467 0.28 +1.4
503,152 - MPMX26_00467 0.29 +0.8
503,152 - MPMX26_00467 0.29 -0.2
503,182 - MPMX26_00467 0.31 +0.6
503,182 - MPMX26_00467 0.31 +0.1
503,182 - MPMX26_00467 0.31 +0.9
503,182 - MPMX26_00467 0.31 +0.1
503,182 - MPMX26_00467 0.31 +0.4
503,182 - MPMX26_00467 0.31 -3.3
503,182 - MPMX26_00467 0.31 +0.1
503,182 - MPMX26_00467 0.31 -0.4
503,196 - MPMX26_00467 0.32 -1.1
503,250 - MPMX26_00467 0.36 +0.0
503,250 - MPMX26_00467 0.36 -0.2
503,250 - MPMX26_00467 0.36 -0.5
503,320 - MPMX26_00467 0.42 +0.7
503,320 - MPMX26_00467 0.42 -0.7
503,320 - MPMX26_00467 0.42 -0.0
503,340 - MPMX26_00467 0.43 -0.4
503,401 - MPMX26_00467 0.48 +0.6
503,523 - MPMX26_00467 0.57 +1.1
503,533 - MPMX26_00467 0.57 -0.3
503,565 - MPMX26_00467 0.60 -0.9
503,701 - MPMX26_00467 0.70 -1.5

Or see this region's nucleotide sequence