Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02837 and MPMX26_02838 are separated by 336 nucleotides MPMX26_02838 and MPMX26_02839 are separated by 210 nucleotides
MPMX26_02837: MPMX26_02837 - Protein YhgF, at 2,928,647 to 2,931,004
_02837
MPMX26_02838: MPMX26_02838 - Transcriptional regulatory protein OmpR, at 2,931,341 to 2,932,105
_02838
MPMX26_02839: MPMX26_02839 - Osmolarity sensor protein EnvZ, at 2,932,316 to 2,933,773
_02839
Position (kb)
2931
2932
2933 Strain fitness (log2 ratio)
-2
-1
0
1 at 2930.424 kb on - strand, within MPMX26_02837 at 2930.445 kb on - strand, within MPMX26_02837 at 2930.445 kb on - strand, within MPMX26_02837 at 2930.445 kb on - strand, within MPMX26_02837 at 2930.490 kb on - strand, within MPMX26_02837 at 2930.490 kb on - strand, within MPMX26_02837 at 2930.502 kb on - strand, within MPMX26_02837 at 2930.502 kb on - strand, within MPMX26_02837 at 2930.509 kb on - strand, within MPMX26_02837 at 2930.509 kb on - strand, within MPMX26_02837 at 2930.560 kb on - strand, within MPMX26_02837 at 2930.565 kb on - strand, within MPMX26_02837 at 2930.570 kb on - strand, within MPMX26_02837 at 2930.575 kb on - strand, within MPMX26_02837 at 2930.577 kb on - strand, within MPMX26_02837 at 2930.582 kb on - strand, within MPMX26_02837 at 2930.590 kb on - strand, within MPMX26_02837 at 2930.590 kb on - strand, within MPMX26_02837 at 2930.602 kb on + strand, within MPMX26_02837 at 2930.610 kb on - strand, within MPMX26_02837 at 2930.661 kb on - strand, within MPMX26_02837 at 2930.688 kb on - strand, within MPMX26_02837 at 2930.688 kb on - strand, within MPMX26_02837 at 2930.733 kb on + strand, within MPMX26_02837 at 2930.741 kb on - strand, within MPMX26_02837 at 2930.741 kb on - strand, within MPMX26_02837 at 2930.741 kb on - strand, within MPMX26_02837 at 2930.741 kb on - strand, within MPMX26_02837 at 2930.741 kb on - strand, within MPMX26_02837 at 2930.747 kb on - strand, within MPMX26_02837 at 2930.801 kb on - strand at 2930.872 kb on - strand at 2930.872 kb on - strand at 2930.872 kb on - strand at 2930.872 kb on - strand at 2930.951 kb on - strand at 2930.956 kb on - strand at 2930.961 kb on - strand at 2930.961 kb on - strand at 2930.961 kb on - strand at 2930.973 kb on - strand at 2930.992 kb on - strand at 2930.992 kb on - strand at 2930.994 kb on - strand at 2930.997 kb on - strand at 2931.008 kb on - strand at 2931.031 kb on - strand at 2931.059 kb on - strand at 2931.247 kb on + strand at 2931.257 kb on + strand at 2931.265 kb on - strand at 2931.284 kb on + strand at 2931.284 kb on + strand at 2931.289 kb on + strand at 2931.294 kb on + strand at 2931.294 kb on + strand at 2931.294 kb on + strand at 2931.294 kb on + strand at 2931.294 kb on + strand at 2931.294 kb on + strand at 2931.301 kb on + strand at 2931.301 kb on + strand at 2931.324 kb on + strand at 2931.324 kb on + strand at 2931.324 kb on + strand at 2931.367 kb on + strand at 2931.377 kb on + strand at 2931.382 kb on + strand at 2931.401 kb on + strand at 2931.420 kb on + strand, within MPMX26_02838 at 2931.464 kb on + strand, within MPMX26_02838 at 2931.594 kb on + strand, within MPMX26_02838 at 2931.604 kb on + strand, within MPMX26_02838 at 2931.681 kb on + strand, within MPMX26_02838 at 2931.738 kb on + strand, within MPMX26_02838 at 2931.743 kb on + strand, within MPMX26_02838 at 2931.743 kb on + strand, within MPMX26_02838 at 2931.743 kb on + strand, within MPMX26_02838 at 2931.743 kb on + strand, within MPMX26_02838 at 2931.743 kb on + strand, within MPMX26_02838 at 2931.777 kb on + strand, within MPMX26_02838 at 2931.790 kb on + strand, within MPMX26_02838 at 2931.796 kb on + strand, within MPMX26_02838 at 2931.930 kb on + strand, within MPMX26_02838 at 2931.960 kb on + strand, within MPMX26_02838 at 2932.095 kb on + strand at 2932.095 kb on + strand at 2932.152 kb on + strand at 2932.202 kb on + strand at 2932.237 kb on + strand at 2932.238 kb on + strand at 2932.354 kb on + strand at 2932.360 kb on + strand at 2932.407 kb on + strand at 2932.407 kb on + strand at 2932.422 kb on + strand at 2932.422 kb on + strand at 2932.432 kb on + strand at 2932.437 kb on + strand at 2932.437 kb on + strand at 2932.437 kb on + strand at 2932.437 kb on + strand at 2932.437 kb on + strand at 2932.437 kb on + strand at 2932.437 kb on + strand at 2932.452 kb on + strand at 2932.460 kb on + strand at 2932.462 kb on + strand, within MPMX26_02839 at 2932.465 kb on + strand, within MPMX26_02839 at 2932.474 kb on + strand, within MPMX26_02839 at 2932.474 kb on + strand, within MPMX26_02839 at 2932.474 kb on + strand, within MPMX26_02839 at 2932.474 kb on + strand, within MPMX26_02839 at 2932.474 kb on + strand, within MPMX26_02839 at 2932.533 kb on + strand, within MPMX26_02839 at 2932.638 kb on + strand, within MPMX26_02839 at 2932.656 kb on + strand, within MPMX26_02839 at 2932.687 kb on + strand, within MPMX26_02839 at 2932.754 kb on + strand, within MPMX26_02839 at 2932.771 kb on + strand, within MPMX26_02839 at 2932.771 kb on + strand, within MPMX26_02839 at 2932.796 kb on + strand, within MPMX26_02839 at 2932.855 kb on + strand, within MPMX26_02839 at 2932.855 kb on + strand, within MPMX26_02839 at 2932.855 kb on + strand, within MPMX26_02839 at 2932.892 kb on + strand, within MPMX26_02839 at 2932.973 kb on + strand, within MPMX26_02839 at 2933.075 kb on + strand, within MPMX26_02839
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 2,930,424 - MPMX26_02837 0.75 -0.1 2,930,445 - MPMX26_02837 0.76 -0.1 2,930,445 - MPMX26_02837 0.76 +0.1 2,930,445 - MPMX26_02837 0.76 +0.5 2,930,490 - MPMX26_02837 0.78 +0.0 2,930,490 - MPMX26_02837 0.78 +0.1 2,930,502 - MPMX26_02837 0.79 +0.3 2,930,502 - MPMX26_02837 0.79 +0.2 2,930,509 - MPMX26_02837 0.79 +0.0 2,930,509 - MPMX26_02837 0.79 -0.1 2,930,560 - MPMX26_02837 0.81 -0.4 2,930,565 - MPMX26_02837 0.81 +0.4 2,930,570 - MPMX26_02837 0.82 +0.1 2,930,575 - MPMX26_02837 0.82 +0.4 2,930,577 - MPMX26_02837 0.82 +0.1 2,930,582 - MPMX26_02837 0.82 +0.2 2,930,590 - MPMX26_02837 0.82 -0.0 2,930,590 - MPMX26_02837 0.82 +0.2 2,930,602 + MPMX26_02837 0.83 +1.0 2,930,610 - MPMX26_02837 0.83 +0.0 2,930,661 - MPMX26_02837 0.85 -0.1 2,930,688 - MPMX26_02837 0.87 -0.2 2,930,688 - MPMX26_02837 0.87 -1.0 2,930,733 + MPMX26_02837 0.88 -0.8 2,930,741 - MPMX26_02837 0.89 +0.2 2,930,741 - MPMX26_02837 0.89 +0.2 2,930,741 - MPMX26_02837 0.89 -0.2 2,930,741 - MPMX26_02837 0.89 +0.1 2,930,741 - MPMX26_02837 0.89 -0.4 2,930,747 - MPMX26_02837 0.89 +0.5 2,930,801 - -0.1 2,930,872 - -0.1 2,930,872 - +0.1 2,930,872 - +0.2 2,930,872 - -0.0 2,930,951 - +0.0 2,930,956 - +0.4 2,930,961 - +0.4 2,930,961 - -0.4 2,930,961 - +0.3 2,930,973 - -1.2 2,930,992 - +0.1 2,930,992 - +0.0 2,930,994 - +0.1 2,930,997 - +0.1 2,931,008 - +0.1 2,931,031 - +0.2 2,931,059 - +0.1 2,931,247 + +0.1 2,931,257 + +0.1 2,931,265 - +1.0 2,931,284 + -1.3 2,931,284 + -0.9 2,931,289 + -1.3 2,931,294 + -0.3 2,931,294 + -0.4 2,931,294 + -1.0 2,931,294 + -2.4 2,931,294 + -0.4 2,931,294 + -1.4 2,931,301 + +0.5 2,931,301 + -1.2 2,931,324 + -0.7 2,931,324 + -1.3 2,931,324 + -2.1 2,931,367 + -1.3 2,931,377 + -2.0 2,931,382 + -2.3 2,931,401 + -0.9 2,931,420 + MPMX26_02838 0.10 -1.4 2,931,464 + MPMX26_02838 0.16 -0.6 2,931,594 + MPMX26_02838 0.33 -1.1 2,931,604 + MPMX26_02838 0.34 -0.6 2,931,681 + MPMX26_02838 0.44 -1.4 2,931,738 + MPMX26_02838 0.52 -0.6 2,931,743 + MPMX26_02838 0.53 -0.9 2,931,743 + MPMX26_02838 0.53 -1.1 2,931,743 + MPMX26_02838 0.53 -0.6 2,931,743 + MPMX26_02838 0.53 -2.0 2,931,743 + MPMX26_02838 0.53 -1.3 2,931,777 + MPMX26_02838 0.57 -0.6 2,931,790 + MPMX26_02838 0.59 -1.3 2,931,796 + MPMX26_02838 0.59 -0.6 2,931,930 + MPMX26_02838 0.77 -1.3 2,931,960 + MPMX26_02838 0.81 -0.3 2,932,095 + -0.3 2,932,095 + +0.1 2,932,152 + -0.2 2,932,202 + -0.5 2,932,237 + -0.2 2,932,238 + -0.6 2,932,354 + -0.3 2,932,360 + -0.2 2,932,407 + +1.3 2,932,407 + -0.0 2,932,422 + +0.1 2,932,422 + +0.3 2,932,432 + -1.6 2,932,437 + -1.5 2,932,437 + +0.6 2,932,437 + +1.1 2,932,437 + +0.6 2,932,437 + -0.2 2,932,437 + -0.7 2,932,437 + -1.4 2,932,452 + -0.9 2,932,460 + +1.2 2,932,462 + MPMX26_02839 0.10 -0.4 2,932,465 + MPMX26_02839 0.10 -0.1 2,932,474 + MPMX26_02839 0.11 -0.5 2,932,474 + MPMX26_02839 0.11 -1.6 2,932,474 + MPMX26_02839 0.11 -0.4 2,932,474 + MPMX26_02839 0.11 -0.2 2,932,474 + MPMX26_02839 0.11 +0.1 2,932,533 + MPMX26_02839 0.15 -0.1 2,932,638 + MPMX26_02839 0.22 -0.2 2,932,656 + MPMX26_02839 0.23 -1.1 2,932,687 + MPMX26_02839 0.25 +0.1 2,932,754 + MPMX26_02839 0.30 -0.7 2,932,771 + MPMX26_02839 0.31 -1.1 2,932,771 + MPMX26_02839 0.31 -0.6 2,932,796 + MPMX26_02839 0.33 +0.9 2,932,855 + MPMX26_02839 0.37 +0.3 2,932,855 + MPMX26_02839 0.37 +0.5 2,932,855 + MPMX26_02839 0.37 -1.2 2,932,892 + MPMX26_02839 0.40 -0.3 2,932,973 + MPMX26_02839 0.45 -0.1 2,933,075 + MPMX26_02839 0.52 -2.4
Or see this region's nucleotide sequence