Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02494 and MPMX26_02495 are separated by 110 nucleotides MPMX26_02495 and MPMX26_02496 are separated by 58 nucleotides MPMX26_02496 and MPMX26_02497 are separated by 76 nucleotides MPMX26_02497 and MPMX26_02498 are separated by 102 nucleotides MPMX26_02498 and MPMX26_02499 are separated by 43 nucleotides MPMX26_02499 and MPMX26_02500 are separated by 19 nucleotides
MPMX26_02494: MPMX26_02494 - hypothetical protein, at 2,582,072 to 2,582,596
_02494
MPMX26_02495: MPMX26_02495 - Acetyl-CoA acetyltransferase, at 2,582,707 to 2,583,882
_02495
MPMX26_02496: MPMX26_02496 - hypothetical protein, at 2,583,941 to 2,584,402
_02496
MPMX26_02497: MPMX26_02497 - tRNA-Val, at 2,584,479 to 2,584,554
_02497
MPMX26_02498: MPMX26_02498 - tRNA-Asp, at 2,584,657 to 2,584,733
_02498
MPMX26_02499: MPMX26_02499 - tRNA-Val, at 2,584,777 to 2,584,852
_02499
MPMX26_02500: MPMX26_02500 - tRNA-Asp, at 2,584,872 to 2,584,948
_02500
Position (kb)
2582
2583
2584 Strain fitness (log2 ratio)
-1
0
1
2 at 2581.717 kb on - strand at 2581.736 kb on - strand at 2581.736 kb on - strand at 2581.755 kb on - strand at 2581.758 kb on - strand at 2581.767 kb on - strand at 2581.767 kb on - strand at 2582.274 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.707 kb on + strand at 2582.724 kb on + strand at 2582.860 kb on + strand, within MPMX26_02495 at 2582.860 kb on + strand, within MPMX26_02495 at 2582.860 kb on + strand, within MPMX26_02495 at 2582.967 kb on + strand, within MPMX26_02495 at 2583.009 kb on + strand, within MPMX26_02495 at 2583.030 kb on + strand, within MPMX26_02495 at 2583.109 kb on + strand, within MPMX26_02495 at 2583.177 kb on + strand, within MPMX26_02495 at 2583.187 kb on + strand, within MPMX26_02495 at 2583.192 kb on + strand, within MPMX26_02495 at 2583.192 kb on + strand, within MPMX26_02495 at 2583.283 kb on + strand, within MPMX26_02495 at 2583.316 kb on + strand, within MPMX26_02495 at 2583.316 kb on + strand, within MPMX26_02495 at 2583.414 kb on + strand, within MPMX26_02495 at 2583.433 kb on + strand, within MPMX26_02495 at 2583.433 kb on + strand, within MPMX26_02495 at 2583.433 kb on + strand, within MPMX26_02495 at 2583.438 kb on + strand, within MPMX26_02495 at 2583.506 kb on + strand, within MPMX26_02495 at 2583.507 kb on + strand, within MPMX26_02495 at 2583.562 kb on + strand, within MPMX26_02495 at 2583.598 kb on + strand, within MPMX26_02495 at 2583.598 kb on + strand, within MPMX26_02495 at 2583.628 kb on + strand, within MPMX26_02495 at 2583.667 kb on + strand, within MPMX26_02495 at 2583.667 kb on + strand, within MPMX26_02495 at 2583.690 kb on + strand, within MPMX26_02495 at 2583.798 kb on + strand at 2583.808 kb on + strand at 2583.808 kb on + strand at 2583.819 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2584.095 kb on - strand, within MPMX26_02496 at 2584.253 kb on - strand, within MPMX26_02496 at 2584.253 kb on - strand, within MPMX26_02496 at 2584.253 kb on - strand, within MPMX26_02496 at 2584.253 kb on - strand, within MPMX26_02496 at 2584.265 kb on - strand, within MPMX26_02496 at 2584.385 kb on - strand at 2584.385 kb on - strand at 2584.395 kb on - strand at 2584.480 kb on - strand at 2584.481 kb on - strand at 2584.481 kb on - strand at 2584.493 kb on - strand, within MPMX26_02497 at 2584.602 kb on - strand at 2584.635 kb on - strand at 2584.681 kb on - strand, within MPMX26_02498 at 2584.681 kb on - strand, within MPMX26_02498 at 2584.681 kb on - strand, within MPMX26_02498 at 2584.779 kb on - strand at 2584.779 kb on - strand at 2584.781 kb on - strand at 2584.781 kb on - strand at 2584.781 kb on - strand at 2584.781 kb on - strand at 2584.781 kb on - strand at 2584.781 kb on - strand at 2584.800 kb on - strand, within MPMX26_02499
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 2,581,717 - -0.9 2,581,736 - -1.0 2,581,736 - -0.3 2,581,755 - -1.4 2,581,758 - -1.1 2,581,767 - -1.4 2,581,767 - -0.2 2,582,274 + MPMX26_02494 0.38 +0.1 2,582,286 + MPMX26_02494 0.41 +0.0 2,582,286 + MPMX26_02494 0.41 -0.8 2,582,286 + MPMX26_02494 0.41 -0.4 2,582,286 + MPMX26_02494 0.41 +0.3 2,582,286 + MPMX26_02494 0.41 -0.1 2,582,286 + MPMX26_02494 0.41 -1.2 2,582,286 + MPMX26_02494 0.41 +0.1 2,582,286 + MPMX26_02494 0.41 +0.4 2,582,286 + MPMX26_02494 0.41 +0.1 2,582,286 + MPMX26_02494 0.41 -0.4 2,582,286 + MPMX26_02494 0.41 +1.3 2,582,286 + MPMX26_02494 0.41 +0.2 2,582,286 + MPMX26_02494 0.41 +0.1 2,582,286 + MPMX26_02494 0.41 +0.2 2,582,286 + MPMX26_02494 0.41 -1.0 2,582,286 + MPMX26_02494 0.41 -0.3 2,582,286 + MPMX26_02494 0.41 -0.2 2,582,286 + MPMX26_02494 0.41 +0.6 2,582,296 + MPMX26_02494 0.43 -0.8 2,582,296 + MPMX26_02494 0.43 -0.0 2,582,296 + MPMX26_02494 0.43 +0.2 2,582,296 + MPMX26_02494 0.43 +0.1 2,582,296 + MPMX26_02494 0.43 +0.1 2,582,296 + MPMX26_02494 0.43 -0.6 2,582,296 + MPMX26_02494 0.43 +0.1 2,582,296 + MPMX26_02494 0.43 +0.2 2,582,296 + MPMX26_02494 0.43 -0.4 2,582,296 + MPMX26_02494 0.43 -0.0 2,582,296 + MPMX26_02494 0.43 +0.1 2,582,296 + MPMX26_02494 0.43 +0.3 2,582,296 + MPMX26_02494 0.43 +0.5 2,582,707 + +0.2 2,582,724 + -0.9 2,582,860 + MPMX26_02495 0.13 -1.7 2,582,860 + MPMX26_02495 0.13 +0.4 2,582,860 + MPMX26_02495 0.13 +0.3 2,582,967 + MPMX26_02495 0.22 +1.0 2,583,009 + MPMX26_02495 0.26 +0.0 2,583,030 + MPMX26_02495 0.27 -0.7 2,583,109 + MPMX26_02495 0.34 +1.9 2,583,177 + MPMX26_02495 0.40 -0.6 2,583,187 + MPMX26_02495 0.41 +0.0 2,583,192 + MPMX26_02495 0.41 +0.3 2,583,192 + MPMX26_02495 0.41 +1.5 2,583,283 + MPMX26_02495 0.49 +0.1 2,583,316 + MPMX26_02495 0.52 +0.2 2,583,316 + MPMX26_02495 0.52 +0.7 2,583,414 + MPMX26_02495 0.60 -0.3 2,583,433 + MPMX26_02495 0.62 +0.5 2,583,433 + MPMX26_02495 0.62 -0.3 2,583,433 + MPMX26_02495 0.62 +0.4 2,583,438 + MPMX26_02495 0.62 +0.6 2,583,506 + MPMX26_02495 0.68 -0.3 2,583,507 + MPMX26_02495 0.68 +0.4 2,583,562 + MPMX26_02495 0.73 -1.0 2,583,598 + MPMX26_02495 0.76 +0.0 2,583,598 + MPMX26_02495 0.76 +0.2 2,583,628 + MPMX26_02495 0.78 +1.3 2,583,667 + MPMX26_02495 0.82 +0.2 2,583,667 + MPMX26_02495 0.82 -0.4 2,583,690 + MPMX26_02495 0.84 +1.1 2,583,798 + -0.4 2,583,808 + -0.4 2,583,808 + -0.2 2,583,819 + -0.9 2,583,852 + -0.5 2,583,852 + -0.6 2,583,852 + -0.2 2,583,852 + -0.0 2,583,852 + -0.8 2,583,852 + +0.8 2,583,852 + +0.0 2,583,852 + +0.2 2,583,852 + +1.3 2,583,852 + +0.3 2,583,852 + -0.5 2,583,852 + -0.3 2,583,852 + -1.2 2,583,852 + -0.3 2,583,852 + +0.3 2,583,852 + -0.6 2,584,095 - MPMX26_02496 0.33 +0.4 2,584,253 - MPMX26_02496 0.68 +0.0 2,584,253 - MPMX26_02496 0.68 -0.3 2,584,253 - MPMX26_02496 0.68 -0.5 2,584,253 - MPMX26_02496 0.68 -0.3 2,584,265 - MPMX26_02496 0.70 -0.3 2,584,385 - +0.1 2,584,385 - +0.4 2,584,395 - +0.3 2,584,480 - -0.1 2,584,481 - +0.6 2,584,481 - -0.2 2,584,493 - MPMX26_02497 0.18 +0.0 2,584,602 - +0.8 2,584,635 - -0.2 2,584,681 - MPMX26_02498 0.31 +0.1 2,584,681 - MPMX26_02498 0.31 -0.7 2,584,681 - MPMX26_02498 0.31 -0.1 2,584,779 - -0.2 2,584,779 - +0.1 2,584,781 - +0.4 2,584,781 - +0.0 2,584,781 - -1.1 2,584,781 - -0.6 2,584,781 - -0.2 2,584,781 - -0.5 2,584,800 - MPMX26_02499 0.30 -0.3
Or see this region's nucleotide sequence