Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02479

Experiment: Ammonium chloride (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02478 and MPMX26_02479 are separated by 39 nucleotidesMPMX26_02479 and MPMX26_02480 are separated by 792 nucleotides MPMX26_02478: MPMX26_02478 - hypothetical protein, at 2,562,831 to 2,563,538 _02478 MPMX26_02479: MPMX26_02479 - hypothetical protein, at 2,563,578 to 2,564,261 _02479 MPMX26_02480: MPMX26_02480 - hypothetical protein, at 2,565,054 to 2,565,596 _02480 Position (kb) 2563 2564 2565Strain fitness (log2 ratio) -1 0 1at 2563.280 kb on - strand, within MPMX26_02478at 2563.355 kb on - strand, within MPMX26_02478at 2563.355 kb on - strand, within MPMX26_02478at 2564.115 kb on - strand, within MPMX26_02479at 2564.417 kb on - strandat 2564.428 kb on - strandat 2564.471 kb on - strandat 2564.471 kb on - strandat 2564.500 kb on - strandat 2564.592 kb on - strandat 2565.214 kb on - strand, within MPMX26_02480

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium chloride (N)
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2,563,280 - MPMX26_02478 0.63 -0.3
2,563,355 - MPMX26_02478 0.74 +0.3
2,563,355 - MPMX26_02478 0.74 -1.0
2,564,115 - MPMX26_02479 0.79 -1.5
2,564,417 - -0.9
2,564,428 - +0.4
2,564,471 - -0.7
2,564,471 - -1.1
2,564,500 - +0.0
2,564,592 - +1.7
2,565,214 - MPMX26_02480 0.29 -0.2

Or see this region's nucleotide sequence