Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01800

Experiment: Ammonium chloride (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01798 and MPMX26_01799 are separated by 56 nucleotidesMPMX26_01799 and MPMX26_01800 are separated by 216 nucleotidesMPMX26_01800 and MPMX26_01801 overlap by 1 nucleotidesMPMX26_01801 and MPMX26_01802 are separated by 70 nucleotides MPMX26_01798: MPMX26_01798 - hypothetical protein, at 1,857,455 to 1,860,022 _01798 MPMX26_01799: MPMX26_01799 - hypothetical protein, at 1,860,079 to 1,860,726 _01799 MPMX26_01800: MPMX26_01800 - hypothetical protein, at 1,860,943 to 1,861,485 _01800 MPMX26_01801: MPMX26_01801 - hypothetical protein, at 1,861,485 to 1,861,970 _01801 MPMX26_01802: MPMX26_01802 - hypothetical protein, at 1,862,041 to 1,862,550 _01802 Position (kb) 1860 1861 1862Strain fitness (log2 ratio) -2 -1 0 1at 1860.304 kb on + strand, within MPMX26_01799at 1860.521 kb on + strand, within MPMX26_01799at 1860.738 kb on + strandat 1861.150 kb on - strand, within MPMX26_01800at 1861.185 kb on - strand, within MPMX26_01800

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium chloride (N)
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1,860,304 + MPMX26_01799 0.35 -1.8
1,860,521 + MPMX26_01799 0.68 +0.9
1,860,738 + -0.3
1,861,150 - MPMX26_01800 0.38 -1.7
1,861,185 - MPMX26_01800 0.45 -0.8

Or see this region's nucleotide sequence