Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01475

Experiment: Ammonium chloride (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_01474 and MPMX26_01475 are separated by 472 nucleotidesMPMX26_01475 and MPMX26_01476 are separated by 113 nucleotides MPMX26_01474: MPMX26_01474 - Aromatic amino acid transport protein AroP, at 1,529,129 to 1,530,514 _01474 MPMX26_01475: MPMX26_01475 - hypothetical protein, at 1,530,987 to 1,531,766 _01475 MPMX26_01476: MPMX26_01476 - 4-hydroxyphenylpyruvate dioxygenase, at 1,531,880 to 1,532,938 _01476 Position (kb) 1530 1531 1532Strain fitness (log2 ratio) -1 0 1at 1530.188 kb on + strand, within MPMX26_01474at 1531.001 kb on + strandat 1531.032 kb on + strandat 1531.059 kb on + strandat 1531.064 kb on + strandat 1531.131 kb on + strand, within MPMX26_01475at 1531.131 kb on + strand, within MPMX26_01475at 1531.131 kb on + strand, within MPMX26_01475at 1531.169 kb on + strand, within MPMX26_01475at 1531.169 kb on + strand, within MPMX26_01475at 1531.169 kb on + strand, within MPMX26_01475at 1531.169 kb on + strand, within MPMX26_01475at 1531.169 kb on + strand, within MPMX26_01475at 1531.169 kb on + strand, within MPMX26_01475at 1531.169 kb on + strand, within MPMX26_01475at 1531.184 kb on + strand, within MPMX26_01475at 1531.184 kb on + strand, within MPMX26_01475at 1531.208 kb on + strand, within MPMX26_01475at 1531.208 kb on + strand, within MPMX26_01475at 1531.215 kb on + strand, within MPMX26_01475at 1531.235 kb on + strand, within MPMX26_01475at 1531.243 kb on + strand, within MPMX26_01475at 1531.299 kb on + strand, within MPMX26_01475at 1531.380 kb on + strand, within MPMX26_01475at 1531.386 kb on + strand, within MPMX26_01475at 1531.386 kb on + strand, within MPMX26_01475at 1531.386 kb on + strand, within MPMX26_01475at 1531.386 kb on + strand, within MPMX26_01475at 1531.403 kb on + strand, within MPMX26_01475at 1531.406 kb on + strand, within MPMX26_01475at 1531.424 kb on + strand, within MPMX26_01475at 1531.449 kb on + strand, within MPMX26_01475at 1531.449 kb on + strand, within MPMX26_01475at 1531.680 kb on + strand, within MPMX26_01475at 1531.748 kb on + strandat 1531.885 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium chloride (N)
remove
1,530,188 + MPMX26_01474 0.76 -0.5
1,531,001 + -1.1
1,531,032 + -0.6
1,531,059 + -0.8
1,531,064 + -0.9
1,531,131 + MPMX26_01475 0.18 -0.5
1,531,131 + MPMX26_01475 0.18 +0.4
1,531,131 + MPMX26_01475 0.18 -1.0
1,531,169 + MPMX26_01475 0.23 -1.3
1,531,169 + MPMX26_01475 0.23 -1.7
1,531,169 + MPMX26_01475 0.23 -0.6
1,531,169 + MPMX26_01475 0.23 -0.9
1,531,169 + MPMX26_01475 0.23 -0.7
1,531,169 + MPMX26_01475 0.23 -0.9
1,531,169 + MPMX26_01475 0.23 -0.7
1,531,184 + MPMX26_01475 0.25 -0.9
1,531,184 + MPMX26_01475 0.25 -1.7
1,531,208 + MPMX26_01475 0.28 -1.3
1,531,208 + MPMX26_01475 0.28 -0.8
1,531,215 + MPMX26_01475 0.29 -0.6
1,531,235 + MPMX26_01475 0.32 -0.6
1,531,243 + MPMX26_01475 0.33 -0.0
1,531,299 + MPMX26_01475 0.40 -0.7
1,531,380 + MPMX26_01475 0.50 -0.9
1,531,386 + MPMX26_01475 0.51 -1.0
1,531,386 + MPMX26_01475 0.51 -0.8
1,531,386 + MPMX26_01475 0.51 -1.6
1,531,386 + MPMX26_01475 0.51 -0.7
1,531,403 + MPMX26_01475 0.53 -0.6
1,531,406 + MPMX26_01475 0.54 -1.7
1,531,424 + MPMX26_01475 0.56 -1.0
1,531,449 + MPMX26_01475 0.59 -1.2
1,531,449 + MPMX26_01475 0.59 -0.8
1,531,680 + MPMX26_01475 0.89 -1.0
1,531,748 + -1.0
1,531,885 + -0.2

Or see this region's nucleotide sequence