Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01474 and MPMX26_01475 are separated by 472 nucleotides MPMX26_01475 and MPMX26_01476 are separated by 113 nucleotides
MPMX26_01474: MPMX26_01474 - Aromatic amino acid transport protein AroP, at 1,529,129 to 1,530,514
_01474
MPMX26_01475: MPMX26_01475 - hypothetical protein, at 1,530,987 to 1,531,766
_01475
MPMX26_01476: MPMX26_01476 - 4-hydroxyphenylpyruvate dioxygenase, at 1,531,880 to 1,532,938
_01476
Position (kb)
1530
1531
1532 Strain fitness (log2 ratio)
-1
0
1 at 1530.188 kb on + strand, within MPMX26_01474 at 1531.001 kb on + strand at 1531.032 kb on + strand at 1531.059 kb on + strand at 1531.064 kb on + strand at 1531.131 kb on + strand, within MPMX26_01475 at 1531.131 kb on + strand, within MPMX26_01475 at 1531.131 kb on + strand, within MPMX26_01475 at 1531.169 kb on + strand, within MPMX26_01475 at 1531.169 kb on + strand, within MPMX26_01475 at 1531.169 kb on + strand, within MPMX26_01475 at 1531.169 kb on + strand, within MPMX26_01475 at 1531.169 kb on + strand, within MPMX26_01475 at 1531.169 kb on + strand, within MPMX26_01475 at 1531.169 kb on + strand, within MPMX26_01475 at 1531.184 kb on + strand, within MPMX26_01475 at 1531.184 kb on + strand, within MPMX26_01475 at 1531.208 kb on + strand, within MPMX26_01475 at 1531.208 kb on + strand, within MPMX26_01475 at 1531.215 kb on + strand, within MPMX26_01475 at 1531.235 kb on + strand, within MPMX26_01475 at 1531.243 kb on + strand, within MPMX26_01475 at 1531.299 kb on + strand, within MPMX26_01475 at 1531.380 kb on + strand, within MPMX26_01475 at 1531.386 kb on + strand, within MPMX26_01475 at 1531.386 kb on + strand, within MPMX26_01475 at 1531.386 kb on + strand, within MPMX26_01475 at 1531.386 kb on + strand, within MPMX26_01475 at 1531.403 kb on + strand, within MPMX26_01475 at 1531.406 kb on + strand, within MPMX26_01475 at 1531.424 kb on + strand, within MPMX26_01475 at 1531.449 kb on + strand, within MPMX26_01475 at 1531.449 kb on + strand, within MPMX26_01475 at 1531.680 kb on + strand, within MPMX26_01475 at 1531.748 kb on + strand at 1531.885 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 1,530,188 + MPMX26_01474 0.76 -0.5 1,531,001 + -1.1 1,531,032 + -0.6 1,531,059 + -0.8 1,531,064 + -0.9 1,531,131 + MPMX26_01475 0.18 -0.5 1,531,131 + MPMX26_01475 0.18 +0.4 1,531,131 + MPMX26_01475 0.18 -1.0 1,531,169 + MPMX26_01475 0.23 -1.3 1,531,169 + MPMX26_01475 0.23 -1.7 1,531,169 + MPMX26_01475 0.23 -0.6 1,531,169 + MPMX26_01475 0.23 -0.9 1,531,169 + MPMX26_01475 0.23 -0.7 1,531,169 + MPMX26_01475 0.23 -0.9 1,531,169 + MPMX26_01475 0.23 -0.7 1,531,184 + MPMX26_01475 0.25 -0.9 1,531,184 + MPMX26_01475 0.25 -1.7 1,531,208 + MPMX26_01475 0.28 -1.3 1,531,208 + MPMX26_01475 0.28 -0.8 1,531,215 + MPMX26_01475 0.29 -0.6 1,531,235 + MPMX26_01475 0.32 -0.6 1,531,243 + MPMX26_01475 0.33 -0.0 1,531,299 + MPMX26_01475 0.40 -0.7 1,531,380 + MPMX26_01475 0.50 -0.9 1,531,386 + MPMX26_01475 0.51 -1.0 1,531,386 + MPMX26_01475 0.51 -0.8 1,531,386 + MPMX26_01475 0.51 -1.6 1,531,386 + MPMX26_01475 0.51 -0.7 1,531,403 + MPMX26_01475 0.53 -0.6 1,531,406 + MPMX26_01475 0.54 -1.7 1,531,424 + MPMX26_01475 0.56 -1.0 1,531,449 + MPMX26_01475 0.59 -1.2 1,531,449 + MPMX26_01475 0.59 -0.8 1,531,680 + MPMX26_01475 0.89 -1.0 1,531,748 + -1.0 1,531,885 + -0.2
Or see this region's nucleotide sequence