Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00859 and MPMX26_00860 are separated by 50 nucleotides MPMX26_00860 and MPMX26_00861 overlap by 53 nucleotides
MPMX26_00859: MPMX26_00859 - HTH-type transcriptional regulator DmlR, at 905,867 to 906,766
_00859
MPMX26_00860: MPMX26_00860 - L-threonine 3-dehydrogenase, at 906,817 to 907,875
_00860
MPMX26_00861: MPMX26_00861 - Mycocerosic acid synthase-like polyketide synthase, at 907,823 to 908,818
_00861
Position (kb) 906
907
908 Strain fitness (log2 ratio) -2
-1
0
1
2 at 905.962 kb on + strand, within MPMX26_00859 at 906.106 kb on + strand, within MPMX26_00859 at 906.124 kb on + strand, within MPMX26_00859 at 906.142 kb on + strand, within MPMX26_00859 at 906.173 kb on + strand, within MPMX26_00859 at 906.173 kb on + strand, within MPMX26_00859 at 906.173 kb on + strand, within MPMX26_00859 at 906.173 kb on + strand, within MPMX26_00859 at 906.173 kb on + strand, within MPMX26_00859 at 906.173 kb on + strand, within MPMX26_00859 at 906.173 kb on + strand, within MPMX26_00859 at 906.196 kb on + strand, within MPMX26_00859 at 906.257 kb on + strand, within MPMX26_00859 at 906.269 kb on + strand, within MPMX26_00859 at 906.394 kb on + strand, within MPMX26_00859 at 906.394 kb on + strand, within MPMX26_00859 at 906.394 kb on + strand, within MPMX26_00859 at 906.433 kb on + strand, within MPMX26_00859 at 906.572 kb on + strand, within MPMX26_00859 at 906.613 kb on + strand, within MPMX26_00859 at 906.613 kb on + strand, within MPMX26_00859 at 906.613 kb on + strand, within MPMX26_00859 at 906.613 kb on + strand, within MPMX26_00859 at 906.613 kb on + strand, within MPMX26_00859 at 906.613 kb on + strand, within MPMX26_00859 at 906.743 kb on + strand at 906.743 kb on + strand at 906.743 kb on + strand at 906.743 kb on + strand at 906.755 kb on + strand at 906.874 kb on - strand at 906.918 kb on - strand at 906.933 kb on - strand, within MPMX26_00860 at 907.029 kb on - strand, within MPMX26_00860 at 907.066 kb on - strand, within MPMX26_00860 at 907.173 kb on - strand, within MPMX26_00860 at 907.753 kb on - strand, within MPMX26_00860 at 907.813 kb on - strand at 907.870 kb on - strand at 907.870 kb on - strand at 907.870 kb on - strand at 907.870 kb on - strand at 907.870 kb on - strand at 907.870 kb on - strand at 907.903 kb on - strand at 907.970 kb on - strand, within MPMX26_00861 at 907.972 kb on - strand, within MPMX26_00861 at 907.984 kb on - strand, within MPMX26_00861 at 908.183 kb on - strand, within MPMX26_00861 at 908.354 kb on - strand, within MPMX26_00861 at 908.354 kb on - strand, within MPMX26_00861 at 908.360 kb on - strand, within MPMX26_00861 at 908.384 kb on - strand, within MPMX26_00861 at 908.543 kb on - strand, within MPMX26_00861 at 908.573 kb on - strand, within MPMX26_00861 at 908.612 kb on - strand, within MPMX26_00861 at 908.627 kb on - strand, within MPMX26_00861 at 908.750 kb on - strand at 908.810 kb on - strand at 908.810 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 905,962 + MPMX26_00859 0.11 +0.6 906,106 + MPMX26_00859 0.27 -0.4 906,124 + MPMX26_00859 0.29 -0.1 906,142 + MPMX26_00859 0.31 +0.3 906,173 + MPMX26_00859 0.34 +0.4 906,173 + MPMX26_00859 0.34 -0.3 906,173 + MPMX26_00859 0.34 -0.3 906,173 + MPMX26_00859 0.34 -0.6 906,173 + MPMX26_00859 0.34 -0.5 906,173 + MPMX26_00859 0.34 -0.4 906,173 + MPMX26_00859 0.34 +0.6 906,196 + MPMX26_00859 0.37 +0.3 906,257 + MPMX26_00859 0.43 +0.6 906,269 + MPMX26_00859 0.45 +0.2 906,394 + MPMX26_00859 0.59 -0.0 906,394 + MPMX26_00859 0.59 +0.0 906,394 + MPMX26_00859 0.59 +0.4 906,433 + MPMX26_00859 0.63 -0.0 906,572 + MPMX26_00859 0.78 +0.0 906,613 + MPMX26_00859 0.83 -0.0 906,613 + MPMX26_00859 0.83 +0.5 906,613 + MPMX26_00859 0.83 +0.1 906,613 + MPMX26_00859 0.83 -0.0 906,613 + MPMX26_00859 0.83 +0.5 906,613 + MPMX26_00859 0.83 -0.0 906,743 + +0.3 906,743 + +0.7 906,743 + +0.0 906,743 + -0.4 906,755 + +0.3 906,874 - +1.2 906,918 - -0.8 906,933 - MPMX26_00860 0.11 -1.7 907,029 - MPMX26_00860 0.20 -0.8 907,066 - MPMX26_00860 0.24 -1.6 907,173 - MPMX26_00860 0.34 -1.4 907,753 - MPMX26_00860 0.88 +0.3 907,813 - -0.8 907,870 - +0.9 907,870 - +1.8 907,870 - -1.0 907,870 - -2.1 907,870 - +0.3 907,870 - -0.6 907,903 - +1.8 907,970 - MPMX26_00861 0.15 +0.8 907,972 - MPMX26_00861 0.15 -0.2 907,984 - MPMX26_00861 0.16 -0.9 908,183 - MPMX26_00861 0.36 +0.2 908,354 - MPMX26_00861 0.53 -0.8 908,354 - MPMX26_00861 0.53 -0.6 908,360 - MPMX26_00861 0.54 +0.2 908,384 - MPMX26_00861 0.56 -0.0 908,543 - MPMX26_00861 0.72 -0.4 908,573 - MPMX26_00861 0.75 -0.0 908,612 - MPMX26_00861 0.79 -0.7 908,627 - MPMX26_00861 0.81 +1.1 908,750 - +0.0 908,810 - +0.4 908,810 - -1.0
Or see this region's nucleotide sequence