Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00530 and MPMX26_00531 are separated by 625 nucleotides MPMX26_00531 and MPMX26_00532 are separated by 89 nucleotides MPMX26_00532 and MPMX26_00533 are separated by 19 nucleotides
MPMX26_00530: MPMX26_00530 - NAD(P) transhydrogenase subunit beta, at 560,300 to 561,757
_00530
MPMX26_00531: MPMX26_00531 - Ribosomal silencing factor RsfS, at 562,383 to 562,784
_00531
MPMX26_00532: MPMX26_00532 - Hydroxypyruvate isomerase, at 562,874 to 563,662
_00532
MPMX26_00533: MPMX26_00533 - 2-hydroxy-3-oxopropionate reductase, at 563,682 to 564,548
_00533
Position (kb) 562
563 Strain fitness (log2 ratio) -2
-1
0
1 at 561.545 kb on + strand, within MPMX26_00530 at 561.749 kb on + strand at 562.087 kb on + strand at 562.388 kb on - strand at 562.388 kb on - strand at 562.388 kb on - strand at 562.388 kb on - strand at 562.400 kb on - strand at 562.424 kb on - strand, within MPMX26_00531 at 562.463 kb on - strand, within MPMX26_00531 at 562.464 kb on - strand, within MPMX26_00531 at 562.466 kb on - strand, within MPMX26_00531 at 562.471 kb on - strand, within MPMX26_00531 at 562.471 kb on - strand, within MPMX26_00531 at 562.574 kb on - strand, within MPMX26_00531 at 562.594 kb on - strand, within MPMX26_00531 at 562.667 kb on - strand, within MPMX26_00531 at 562.677 kb on + strand, within MPMX26_00531 at 562.685 kb on - strand, within MPMX26_00531 at 562.685 kb on - strand, within MPMX26_00531 at 562.685 kb on - strand, within MPMX26_00531 at 562.715 kb on - strand, within MPMX26_00531 at 562.715 kb on - strand, within MPMX26_00531 at 562.717 kb on - strand, within MPMX26_00531 at 562.725 kb on - strand, within MPMX26_00531 at 562.758 kb on - strand at 562.780 kb on - strand at 562.812 kb on - strand at 562.824 kb on - strand at 562.824 kb on - strand at 562.824 kb on - strand at 562.849 kb on - strand at 562.927 kb on - strand at 563.016 kb on + strand, within MPMX26_00532 at 563.024 kb on - strand, within MPMX26_00532 at 563.030 kb on - strand, within MPMX26_00532 at 563.039 kb on - strand, within MPMX26_00532 at 563.096 kb on - strand, within MPMX26_00532 at 563.171 kb on - strand, within MPMX26_00532 at 563.183 kb on - strand, within MPMX26_00532 at 563.200 kb on - strand, within MPMX26_00532 at 563.308 kb on - strand, within MPMX26_00532 at 563.310 kb on - strand, within MPMX26_00532 at 563.311 kb on - strand, within MPMX26_00532 at 563.311 kb on - strand, within MPMX26_00532 at 563.389 kb on - strand, within MPMX26_00532 at 563.406 kb on - strand, within MPMX26_00532 at 563.406 kb on - strand, within MPMX26_00532 at 563.531 kb on - strand, within MPMX26_00532 at 563.620 kb on - strand at 563.639 kb on - strand at 563.649 kb on - strand at 563.694 kb on - strand at 563.712 kb on - strand at 563.766 kb on - strand at 563.766 kb on - strand at 563.771 kb on - strand, within MPMX26_00533
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 561,545 + MPMX26_00530 0.85 +0.2 561,749 + +1.5 562,087 + -0.6 562,388 - +0.1 562,388 - -0.0 562,388 - -0.0 562,388 - +0.1 562,400 - +0.3 562,424 - MPMX26_00531 0.10 +0.0 562,463 - MPMX26_00531 0.20 +0.5 562,464 - MPMX26_00531 0.20 +0.3 562,466 - MPMX26_00531 0.21 +0.3 562,471 - MPMX26_00531 0.22 +0.2 562,471 - MPMX26_00531 0.22 +0.1 562,574 - MPMX26_00531 0.48 +0.5 562,594 - MPMX26_00531 0.52 +0.1 562,667 - MPMX26_00531 0.71 +0.4 562,677 + MPMX26_00531 0.73 +0.4 562,685 - MPMX26_00531 0.75 +0.5 562,685 - MPMX26_00531 0.75 +0.3 562,685 - MPMX26_00531 0.75 +0.5 562,715 - MPMX26_00531 0.83 +0.5 562,715 - MPMX26_00531 0.83 +0.8 562,717 - MPMX26_00531 0.83 +0.1 562,725 - MPMX26_00531 0.85 +0.6 562,758 - +0.3 562,780 - +0.3 562,812 - +0.3 562,824 - +0.4 562,824 - +0.4 562,824 - +0.9 562,849 - +0.6 562,927 - +0.8 563,016 + MPMX26_00532 0.18 -0.3 563,024 - MPMX26_00532 0.19 +0.1 563,030 - MPMX26_00532 0.20 -1.2 563,039 - MPMX26_00532 0.21 -0.1 563,096 - MPMX26_00532 0.28 +0.0 563,171 - MPMX26_00532 0.38 -0.2 563,183 - MPMX26_00532 0.39 -1.8 563,200 - MPMX26_00532 0.41 -0.7 563,308 - MPMX26_00532 0.55 +0.1 563,310 - MPMX26_00532 0.55 -0.2 563,311 - MPMX26_00532 0.55 -0.6 563,311 - MPMX26_00532 0.55 -0.3 563,389 - MPMX26_00532 0.65 -0.6 563,406 - MPMX26_00532 0.67 -1.0 563,406 - MPMX26_00532 0.67 -0.4 563,531 - MPMX26_00532 0.83 -2.3 563,620 - -0.1 563,639 - -0.2 563,649 - +1.1 563,694 - +0.2 563,712 - +0.8 563,766 - +1.3 563,766 - +0.2 563,771 - MPMX26_00533 0.10 +0.7
Or see this region's nucleotide sequence