Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00506

Experiment: Ammonium chloride (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00505 and MPMX26_00506 overlap by 4 nucleotidesMPMX26_00506 and MPMX26_00507 overlap by 11 nucleotidesMPMX26_00507 and MPMX26_00508 are separated by 63 nucleotides MPMX26_00505: MPMX26_00505 - hypothetical protein, at 536,922 to 538,760 _00505 MPMX26_00506: MPMX26_00506 - hypothetical protein, at 538,757 to 540,010 _00506 MPMX26_00507: MPMX26_00507 - hypothetical protein, at 540,000 to 540,740 _00507 MPMX26_00508: MPMX26_00508 - hypothetical protein, at 540,804 to 542,105 _00508 Position (kb) 538 539 540 541Strain fitness (log2 ratio) -1 0 1at 537.944 kb on - strand, within MPMX26_00505at 539.113 kb on - strand, within MPMX26_00506at 541.007 kb on + strand, within MPMX26_00508

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium chloride (N)
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537,944 - MPMX26_00505 0.56 -0.0
539,113 - MPMX26_00506 0.28 -1.3
541,007 + MPMX26_00508 0.16 -0.0

Or see this region's nucleotide sequence