Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00348

Experiment: Ammonium chloride (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00346 and MPMX26_00347 are separated by 99 nucleotidesMPMX26_00347 and MPMX26_00348 are separated by 50 nucleotidesMPMX26_00348 and MPMX26_00349 are separated by 61 nucleotidesMPMX26_00349 and MPMX26_00350 are separated by 200 nucleotides MPMX26_00346: MPMX26_00346 - 3-isopropylmalate dehydratase small subunit 1, at 376,434 to 377,084 _00346 MPMX26_00347: MPMX26_00347 - hypothetical protein, at 377,184 to 377,756 _00347 MPMX26_00348: MPMX26_00348 - 3-isopropylmalate dehydrogenase, at 377,807 to 378,886 _00348 MPMX26_00349: MPMX26_00349 - hypothetical protein, at 378,948 to 379,349 _00349 MPMX26_00350: MPMX26_00350 - Translation initiation factor IF-1, at 379,550 to 379,771 _00350 Position (kb) 377 378 379Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 376.880 kb on + strand, within MPMX26_00346at 376.880 kb on + strand, within MPMX26_00346at 376.880 kb on + strand, within MPMX26_00346at 376.880 kb on + strand, within MPMX26_00346at 376.880 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.885 kb on + strand, within MPMX26_00346at 376.902 kb on + strand, within MPMX26_00346at 376.910 kb on + strand, within MPMX26_00346at 376.936 kb on + strand, within MPMX26_00346at 376.936 kb on + strand, within MPMX26_00346at 376.968 kb on + strand, within MPMX26_00346at 376.970 kb on + strand, within MPMX26_00346at 376.978 kb on + strand, within MPMX26_00346at 376.992 kb on + strand, within MPMX26_00346at 376.992 kb on + strand, within MPMX26_00346at 376.992 kb on + strand, within MPMX26_00346at 376.992 kb on + strand, within MPMX26_00346at 377.013 kb on + strand, within MPMX26_00346at 377.078 kb on + strandat 377.110 kb on + strandat 377.203 kb on + strandat 377.206 kb on + strandat 377.208 kb on + strandat 377.229 kb on + strandat 377.229 kb on + strandat 377.229 kb on + strandat 377.239 kb on + strandat 377.253 kb on + strand, within MPMX26_00347at 377.321 kb on + strand, within MPMX26_00347at 377.321 kb on + strand, within MPMX26_00347at 377.360 kb on + strand, within MPMX26_00347at 377.379 kb on + strand, within MPMX26_00347at 377.384 kb on + strand, within MPMX26_00347at 377.386 kb on + strand, within MPMX26_00347at 377.386 kb on + strand, within MPMX26_00347at 377.468 kb on + strand, within MPMX26_00347at 377.471 kb on + strand, within MPMX26_00347at 377.476 kb on + strand, within MPMX26_00347at 377.481 kb on + strand, within MPMX26_00347at 377.495 kb on + strand, within MPMX26_00347at 377.502 kb on + strand, within MPMX26_00347at 377.502 kb on + strand, within MPMX26_00347at 377.564 kb on + strand, within MPMX26_00347at 377.564 kb on + strand, within MPMX26_00347at 377.564 kb on + strand, within MPMX26_00347at 377.564 kb on + strand, within MPMX26_00347at 377.564 kb on + strand, within MPMX26_00347at 377.564 kb on + strand, within MPMX26_00347at 377.564 kb on + strand, within MPMX26_00347at 377.564 kb on + strand, within MPMX26_00347at 377.569 kb on + strand, within MPMX26_00347at 377.574 kb on + strand, within MPMX26_00347at 377.574 kb on + strand, within MPMX26_00347at 377.574 kb on + strand, within MPMX26_00347at 377.579 kb on + strand, within MPMX26_00347at 377.579 kb on + strand, within MPMX26_00347at 377.579 kb on + strand, within MPMX26_00347at 377.579 kb on + strand, within MPMX26_00347at 377.579 kb on + strand, within MPMX26_00347at 377.579 kb on + strand, within MPMX26_00347at 377.579 kb on + strand, within MPMX26_00347at 377.579 kb on + strand, within MPMX26_00347at 377.579 kb on + strand, within MPMX26_00347at 377.644 kb on + strand, within MPMX26_00347at 377.649 kb on + strand, within MPMX26_00347at 377.649 kb on + strand, within MPMX26_00347at 377.649 kb on + strand, within MPMX26_00347at 377.659 kb on + strand, within MPMX26_00347at 377.659 kb on + strand, within MPMX26_00347at 377.659 kb on + strand, within MPMX26_00347at 377.659 kb on + strand, within MPMX26_00347at 377.659 kb on + strand, within MPMX26_00347at 377.659 kb on + strand, within MPMX26_00347at 377.659 kb on + strand, within MPMX26_00347at 377.699 kb on + strandat 377.715 kb on + strandat 377.715 kb on + strandat 377.760 kb on + strandat 377.767 kb on + strandat 377.767 kb on + strandat 377.767 kb on + strandat 377.842 kb on + strandat 377.865 kb on + strandat 377.865 kb on + strandat 377.875 kb on + strandat 377.875 kb on + strandat 377.875 kb on + strandat 377.875 kb on + strandat 377.876 kb on + strandat 377.876 kb on + strandat 377.876 kb on + strandat 377.876 kb on + strandat 377.909 kb on + strandat 377.916 kb on + strand, within MPMX26_00348at 377.930 kb on + strand, within MPMX26_00348at 377.930 kb on + strand, within MPMX26_00348at 377.930 kb on + strand, within MPMX26_00348at 377.946 kb on + strand, within MPMX26_00348at 377.959 kb on + strand, within MPMX26_00348at 377.960 kb on + strand, within MPMX26_00348at 377.965 kb on + strand, within MPMX26_00348at 377.965 kb on + strand, within MPMX26_00348at 377.965 kb on + strand, within MPMX26_00348at 377.965 kb on + strand, within MPMX26_00348at 377.965 kb on + strand, within MPMX26_00348at 377.965 kb on + strand, within MPMX26_00348at 377.965 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 378.016 kb on + strand, within MPMX26_00348at 378.016 kb on + strand, within MPMX26_00348at 378.021 kb on + strand, within MPMX26_00348at 378.032 kb on + strand, within MPMX26_00348at 378.043 kb on + strand, within MPMX26_00348at 378.057 kb on + strand, within MPMX26_00348at 378.061 kb on + strand, within MPMX26_00348at 378.066 kb on + strand, within MPMX26_00348at 378.083 kb on + strand, within MPMX26_00348at 378.185 kb on + strand, within MPMX26_00348at 378.185 kb on + strand, within MPMX26_00348at 378.185 kb on + strand, within MPMX26_00348at 378.203 kb on + strand, within MPMX26_00348at 378.272 kb on + strand, within MPMX26_00348at 378.277 kb on + strand, within MPMX26_00348at 378.280 kb on + strand, within MPMX26_00348at 378.288 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.342 kb on + strand, within MPMX26_00348at 378.347 kb on + strand, within MPMX26_00348at 378.350 kb on - strand, within MPMX26_00348at 378.359 kb on + strand, within MPMX26_00348at 378.377 kb on + strand, within MPMX26_00348at 378.398 kb on + strand, within MPMX26_00348at 378.418 kb on + strand, within MPMX26_00348at 378.418 kb on + strand, within MPMX26_00348at 378.418 kb on + strand, within MPMX26_00348at 378.428 kb on + strand, within MPMX26_00348at 378.454 kb on + strand, within MPMX26_00348at 378.454 kb on + strand, within MPMX26_00348at 378.454 kb on + strand, within MPMX26_00348at 378.488 kb on + strand, within MPMX26_00348at 378.496 kb on + strand, within MPMX26_00348at 378.496 kb on + strand, within MPMX26_00348at 378.496 kb on + strand, within MPMX26_00348at 378.507 kb on + strand, within MPMX26_00348at 378.549 kb on + strand, within MPMX26_00348at 378.570 kb on + strand, within MPMX26_00348at 378.575 kb on + strand, within MPMX26_00348at 378.625 kb on + strand, within MPMX26_00348at 378.625 kb on + strand, within MPMX26_00348at 378.625 kb on + strand, within MPMX26_00348at 378.637 kb on + strand, within MPMX26_00348at 378.637 kb on + strand, within MPMX26_00348at 378.654 kb on + strand, within MPMX26_00348at 378.659 kb on + strand, within MPMX26_00348at 378.692 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.774 kb on + strand, within MPMX26_00348at 378.785 kb on + strandat 378.785 kb on + strandat 378.785 kb on + strandat 378.785 kb on + strandat 378.797 kb on + strandat 378.797 kb on + strandat 378.797 kb on + strandat 378.807 kb on + strandat 378.807 kb on + strandat 378.866 kb on + strandat 378.869 kb on + strandat 379.079 kb on - strand, within MPMX26_00349at 379.223 kb on - strand, within MPMX26_00349at 379.228 kb on - strand, within MPMX26_00349at 379.228 kb on - strand, within MPMX26_00349at 379.526 kb on - strandat 379.555 kb on - strandat 379.555 kb on - strandat 379.555 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium chloride (N)
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376,880 + MPMX26_00346 0.69 -2.9
376,880 + MPMX26_00346 0.69 -4.9
376,880 + MPMX26_00346 0.69 -4.6
376,880 + MPMX26_00346 0.69 -5.0
376,880 + MPMX26_00346 0.69 -3.6
376,885 + MPMX26_00346 0.69 -4.8
376,885 + MPMX26_00346 0.69 -5.7
376,885 + MPMX26_00346 0.69 -4.2
376,885 + MPMX26_00346 0.69 -1.6
376,885 + MPMX26_00346 0.69 -5.5
376,885 + MPMX26_00346 0.69 -4.2
376,885 + MPMX26_00346 0.69 -5.5
376,885 + MPMX26_00346 0.69 -4.4
376,885 + MPMX26_00346 0.69 -3.9
376,885 + MPMX26_00346 0.69 -3.9
376,885 + MPMX26_00346 0.69 -3.6
376,885 + MPMX26_00346 0.69 -3.0
376,885 + MPMX26_00346 0.69 -5.8
376,885 + MPMX26_00346 0.69 -3.7
376,885 + MPMX26_00346 0.69 -4.9
376,885 + MPMX26_00346 0.69 -2.5
376,885 + MPMX26_00346 0.69 -5.1
376,885 + MPMX26_00346 0.69 -4.1
376,885 + MPMX26_00346 0.69 -3.5
376,885 + MPMX26_00346 0.69 -3.3
376,902 + MPMX26_00346 0.72 -3.8
376,910 + MPMX26_00346 0.73 -5.3
376,936 + MPMX26_00346 0.77 -5.6
376,936 + MPMX26_00346 0.77 -4.2
376,968 + MPMX26_00346 0.82 -5.1
376,970 + MPMX26_00346 0.82 -5.1
376,978 + MPMX26_00346 0.84 -5.2
376,992 + MPMX26_00346 0.86 -1.3
376,992 + MPMX26_00346 0.86 -4.6
376,992 + MPMX26_00346 0.86 -4.2
376,992 + MPMX26_00346 0.86 -4.7
377,013 + MPMX26_00346 0.89 -3.6
377,078 + +0.2
377,110 + -0.6
377,203 + -0.1
377,206 + -0.4
377,208 + -1.8
377,229 + +0.1
377,229 + -0.1
377,229 + -0.4
377,239 + +0.4
377,253 + MPMX26_00347 0.12 -0.4
377,321 + MPMX26_00347 0.24 -0.3
377,321 + MPMX26_00347 0.24 -0.2
377,360 + MPMX26_00347 0.31 -0.8
377,379 + MPMX26_00347 0.34 -0.1
377,384 + MPMX26_00347 0.35 -0.2
377,386 + MPMX26_00347 0.35 -0.1
377,386 + MPMX26_00347 0.35 -0.6
377,468 + MPMX26_00347 0.50 -0.4
377,471 + MPMX26_00347 0.50 -0.8
377,476 + MPMX26_00347 0.51 -0.1
377,481 + MPMX26_00347 0.52 -0.5
377,495 + MPMX26_00347 0.54 -0.4
377,502 + MPMX26_00347 0.55 -0.1
377,502 + MPMX26_00347 0.55 -0.4
377,564 + MPMX26_00347 0.66 +0.7
377,564 + MPMX26_00347 0.66 -0.2
377,564 + MPMX26_00347 0.66 -0.3
377,564 + MPMX26_00347 0.66 -0.9
377,564 + MPMX26_00347 0.66 -0.1
377,564 + MPMX26_00347 0.66 -0.4
377,564 + MPMX26_00347 0.66 -0.5
377,564 + MPMX26_00347 0.66 -0.2
377,569 + MPMX26_00347 0.67 -0.5
377,574 + MPMX26_00347 0.68 -0.3
377,574 + MPMX26_00347 0.68 -0.4
377,574 + MPMX26_00347 0.68 +0.0
377,579 + MPMX26_00347 0.69 -0.5
377,579 + MPMX26_00347 0.69 -0.0
377,579 + MPMX26_00347 0.69 -0.3
377,579 + MPMX26_00347 0.69 -0.3
377,579 + MPMX26_00347 0.69 -0.3
377,579 + MPMX26_00347 0.69 -0.4
377,579 + MPMX26_00347 0.69 -0.6
377,579 + MPMX26_00347 0.69 -0.1
377,579 + MPMX26_00347 0.69 -0.9
377,644 + MPMX26_00347 0.80 -0.6
377,649 + MPMX26_00347 0.81 -0.3
377,649 + MPMX26_00347 0.81 -0.3
377,649 + MPMX26_00347 0.81 -0.5
377,659 + MPMX26_00347 0.83 -0.4
377,659 + MPMX26_00347 0.83 -0.3
377,659 + MPMX26_00347 0.83 -0.5
377,659 + MPMX26_00347 0.83 -0.2
377,659 + MPMX26_00347 0.83 -0.6
377,659 + MPMX26_00347 0.83 -0.3
377,659 + MPMX26_00347 0.83 +0.1
377,699 + -0.4
377,715 + -0.5
377,715 + -0.4
377,760 + +0.3
377,767 + -0.4
377,767 + -0.3
377,767 + -0.3
377,842 + -5.6
377,865 + -4.0
377,865 + -4.8
377,875 + -5.8
377,875 + -4.1
377,875 + -4.8
377,875 + -4.1
377,876 + -4.6
377,876 + -4.3
377,876 + -3.7
377,876 + -4.9
377,909 + -4.9
377,916 + MPMX26_00348 0.10 -4.1
377,930 + MPMX26_00348 0.11 -4.5
377,930 + MPMX26_00348 0.11 -4.1
377,930 + MPMX26_00348 0.11 -4.0
377,946 + MPMX26_00348 0.13 -5.0
377,959 + MPMX26_00348 0.14 -4.7
377,960 + MPMX26_00348 0.14 -2.9
377,965 + MPMX26_00348 0.15 -3.6
377,965 + MPMX26_00348 0.15 -4.9
377,965 + MPMX26_00348 0.15 -4.8
377,965 + MPMX26_00348 0.15 -4.4
377,965 + MPMX26_00348 0.15 -1.7
377,965 + MPMX26_00348 0.15 -6.2
377,965 + MPMX26_00348 0.15 -5.3
377,970 + MPMX26_00348 0.15 -2.8
377,970 + MPMX26_00348 0.15 -4.8
377,970 + MPMX26_00348 0.15 -4.8
377,970 + MPMX26_00348 0.15 -4.8
377,970 + MPMX26_00348 0.15 -4.7
377,970 + MPMX26_00348 0.15 -2.1
377,970 + MPMX26_00348 0.15 -0.6
377,970 + MPMX26_00348 0.15 -4.6
378,016 + MPMX26_00348 0.19 -1.1
378,016 + MPMX26_00348 0.19 -4.1
378,021 + MPMX26_00348 0.20 -4.7
378,032 + MPMX26_00348 0.21 -2.8
378,043 + MPMX26_00348 0.22 -5.0
378,057 + MPMX26_00348 0.23 -4.5
378,061 + MPMX26_00348 0.24 -5.3
378,066 + MPMX26_00348 0.24 -2.9
378,083 + MPMX26_00348 0.26 -4.5
378,185 + MPMX26_00348 0.35 -5.8
378,185 + MPMX26_00348 0.35 -4.5
378,185 + MPMX26_00348 0.35 -5.0
378,203 + MPMX26_00348 0.37 -5.6
378,272 + MPMX26_00348 0.43 -5.2
378,277 + MPMX26_00348 0.44 -3.7
378,280 + MPMX26_00348 0.44 -5.2
378,288 + MPMX26_00348 0.45 -4.7
378,290 + MPMX26_00348 0.45 -5.2
378,290 + MPMX26_00348 0.45 -3.2
378,290 + MPMX26_00348 0.45 -4.6
378,290 + MPMX26_00348 0.45 -5.2
378,290 + MPMX26_00348 0.45 -3.1
378,290 + MPMX26_00348 0.45 -4.1
378,290 + MPMX26_00348 0.45 -3.0
378,290 + MPMX26_00348 0.45 -4.4
378,290 + MPMX26_00348 0.45 -4.4
378,290 + MPMX26_00348 0.45 -4.1
378,290 + MPMX26_00348 0.45 -2.3
378,290 + MPMX26_00348 0.45 -4.3
378,290 + MPMX26_00348 0.45 -4.7
378,290 + MPMX26_00348 0.45 -4.2
378,290 + MPMX26_00348 0.45 -4.8
378,290 + MPMX26_00348 0.45 -4.0
378,342 + MPMX26_00348 0.50 -4.5
378,347 + MPMX26_00348 0.50 -4.0
378,350 - MPMX26_00348 0.50 -4.3
378,359 + MPMX26_00348 0.51 -5.5
378,377 + MPMX26_00348 0.53 -4.4
378,398 + MPMX26_00348 0.55 -4.9
378,418 + MPMX26_00348 0.57 -5.5
378,418 + MPMX26_00348 0.57 -0.3
378,418 + MPMX26_00348 0.57 -3.5
378,428 + MPMX26_00348 0.57 -3.3
378,454 + MPMX26_00348 0.60 -4.6
378,454 + MPMX26_00348 0.60 -4.4
378,454 + MPMX26_00348 0.60 -5.2
378,488 + MPMX26_00348 0.63 -4.3
378,496 + MPMX26_00348 0.64 -4.4
378,496 + MPMX26_00348 0.64 -1.4
378,496 + MPMX26_00348 0.64 -4.5
378,507 + MPMX26_00348 0.65 -4.9
378,549 + MPMX26_00348 0.69 -4.9
378,570 + MPMX26_00348 0.71 -5.2
378,575 + MPMX26_00348 0.71 -4.8
378,625 + MPMX26_00348 0.76 -6.4
378,625 + MPMX26_00348 0.76 -1.1
378,625 + MPMX26_00348 0.76 -4.2
378,637 + MPMX26_00348 0.77 -2.6
378,637 + MPMX26_00348 0.77 -5.7
378,654 + MPMX26_00348 0.78 -4.5
378,659 + MPMX26_00348 0.79 -5.1
378,692 + MPMX26_00348 0.82 -2.7
378,727 + MPMX26_00348 0.85 -3.1
378,727 + MPMX26_00348 0.85 -4.1
378,727 + MPMX26_00348 0.85 -5.8
378,727 + MPMX26_00348 0.85 -4.3
378,727 + MPMX26_00348 0.85 -5.0
378,727 + MPMX26_00348 0.85 -3.9
378,727 + MPMX26_00348 0.85 -3.5
378,727 + MPMX26_00348 0.85 -5.1
378,727 + MPMX26_00348 0.85 -5.1
378,774 + MPMX26_00348 0.90 -3.9
378,785 + -4.6
378,785 + -3.7
378,785 + -4.0
378,785 + -5.3
378,797 + -3.4
378,797 + -4.9
378,797 + -5.4
378,807 + -3.8
378,807 + -3.7
378,866 + -3.4
378,869 + -0.4
379,079 - MPMX26_00349 0.33 -0.2
379,223 - MPMX26_00349 0.68 +0.7
379,228 - MPMX26_00349 0.70 +1.5
379,228 - MPMX26_00349 0.70 -0.1
379,526 - -1.3
379,555 - -0.3
379,555 - +0.3
379,555 - -0.2

Or see this region's nucleotide sequence