Strain Fitness in Escherichia fergusonii Becca around EFB2_00810

Experiment: BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)
824,793	+		EFB2_00808	0.57	-0.3
824,793	+		EFB2_00808	0.57	-0.8
824,793	+		EFB2_00808	0.57	-0.8
824,794	-		EFB2_00808	0.57	-0.4
824,794	-		EFB2_00808	0.57	-1.1
824,794	-		EFB2_00808	0.57	-0.9
824,794	-		EFB2_00808	0.57	+1.3
824,829	+		EFB2_00808	0.61	+1.1
824,829	+		EFB2_00808	0.61	+0.0
824,829	+		EFB2_00808	0.61	+0.7
824,845	+		EFB2_00808	0.63	-0.9
824,845	+		EFB2_00808	0.63	+0.7
824,846	-		EFB2_00808	0.63	+1.6
824,882	-		EFB2_00808	0.67	-2.3
824,911	+		EFB2_00808	0.70	-1.8
824,912	-		EFB2_00808	0.70	+0.9
824,912	-		EFB2_00808	0.70	+1.1
824,912	-		EFB2_00808	0.70	-0.4
824,912	-		EFB2_00808	0.70	-2.0
824,960	+		EFB2_00808	0.76	-2.7
824,960	+		EFB2_00808	0.76	+0.2
824,960	+		EFB2_00808	0.76	+1.3
824,960	+		EFB2_00808	0.76	-2.3
824,960	+		EFB2_00808	0.76	-0.1
824,960	+		EFB2_00808	0.76	-0.7
824,960	+		EFB2_00808	0.76	+0.0
824,960	+		EFB2_00808	0.76	-0.6
824,961	-		EFB2_00808	0.76	-1.5
824,961	-		EFB2_00808	0.76	-0.4
824,961	-		EFB2_00808	0.76	-0.3
824,961	-		EFB2_00808	0.76	+0.7
824,961	-		EFB2_00808	0.76	-1.1
824,963	+		EFB2_00808	0.76	+1.3
824,963	+		EFB2_00808	0.76	+0.3
824,963	+		EFB2_00808	0.76	-2.1
824,964	-		EFB2_00808	0.76	+0.4
824,964	-		EFB2_00808	0.76	-0.8
824,964	-		EFB2_00808	0.76	-0.2
824,964	-		EFB2_00808	0.76	-0.3
824,964	-		EFB2_00808	0.76	-2.4
824,964	-		EFB2_00808	0.76	+1.2
824,964	-		EFB2_00808	0.76	-1.3
824,971	+		EFB2_00808	0.77	-0.6
825,013	+		EFB2_00808	0.82	+0.5
825,013	+		EFB2_00808	0.82	-0.3
825,014	-		EFB2_00808	0.82	-1.2
825,014	-		EFB2_00808	0.82	+1.1
825,036	+		EFB2_00808	0.84	-0.3
825,036	+		EFB2_00808	0.84	+1.3
825,036	+		EFB2_00808	0.84	-0.8
825,037	-		EFB2_00808	0.84	+0.5
825,037	-		EFB2_00808	0.84	+0.1
825,037	-		EFB2_00808	0.84	+0.8
825,037	-		EFB2_00808	0.84	+0.0
825,037	-		EFB2_00808	0.84	+0.9
825,039	+		EFB2_00808	0.85	-0.0
825,039	+		EFB2_00808	0.85	-0.9
825,039	+		EFB2_00808	0.85	-0.8
825,039	+		EFB2_00808	0.85	+1.1
825,039	+		EFB2_00808	0.85	-2.0
825,040	-		EFB2_00808	0.85	+0.4
825,040	-		EFB2_00808	0.85	+0.2
825,040	-		EFB2_00808	0.85	-0.0
825,040	-		EFB2_00808	0.85	+0.1
825,040	-		EFB2_00808	0.85	-0.3
825,046	+		EFB2_00808	0.85	-1.9
825,046	+		EFB2_00808	0.85	-0.7
825,046	+		EFB2_00808	0.85	+2.3
825,046	+		EFB2_00808	0.85	-0.6
825,046	+		EFB2_00808	0.85	-0.6
825,046	+		EFB2_00808	0.85	+0.4
825,046	+		EFB2_00808	0.85	+0.3
825,046	+		EFB2_00808	0.85	-2.9
825,046	+		EFB2_00808	0.85	+1.5
825,046	+		EFB2_00808	0.85	-2.3
825,046	+		EFB2_00808	0.85	+0.0
825,047	-		EFB2_00808	0.86	+0.8
825,047	-		EFB2_00808	0.86	+0.6
825,047	-		EFB2_00808	0.86	-0.5
825,047	-		EFB2_00808	0.86	-2.1
825,047	-		EFB2_00808	0.86	+0.8
825,047	-		EFB2_00808	0.86	+0.5
825,047	-		EFB2_00808	0.86	+1.6
825,047	-		EFB2_00808	0.86	-0.2
825,047	-		EFB2_00808	0.86	+0.5
825,055	+		EFB2_00808	0.86	+0.3
825,055	+		EFB2_00808	0.86	-0.0
825,055	+		EFB2_00808	0.86	+0.3
825,055	+		EFB2_00808	0.86	+0.4
825,055	+		EFB2_00808	0.86	-2.7
825,055	+		EFB2_00808	0.86	+0.8
825,055	+		EFB2_00808	0.86	-1.4
825,055	+		EFB2_00808	0.86	+1.7
825,055	+		EFB2_00808	0.86	-0.2
825,055	+		EFB2_00808	0.86	-0.6
825,055	+		EFB2_00808	0.86	+0.4
825,055	+		EFB2_00808	0.86	-0.5
825,055	+		EFB2_00808	0.86	-1.2
825,056	-		EFB2_00808	0.87	-0.3
825,056	-		EFB2_00808	0.87	-0.6
825,056	-		EFB2_00808	0.87	-1.3
825,056	-		EFB2_00808	0.87	+0.2
825,056	-		EFB2_00808	0.87	-0.3
825,056	-		EFB2_00808	0.87	-1.7
825,056	-		EFB2_00808	0.87	+0.1
825,056	-		EFB2_00808	0.87	+0.7
825,056	-		EFB2_00808	0.87	-0.5
825,056	-		EFB2_00808	0.87	-3.2
825,056	-		EFB2_00808	0.87	-0.8
825,056	-		EFB2_00808	0.87	-0.2
825,056	-		EFB2_00808	0.87	-0.2
825,056	-		EFB2_00808	0.87	-0.4
825,056	-		EFB2_00808	0.87	-2.6
825,056	-		EFB2_00808	0.87	+1.1
825,057	+		EFB2_00808	0.87	+1.5
825,057	+		EFB2_00808	0.87	+0.3
825,057	+		EFB2_00808	0.87	-3.1
825,057	+		EFB2_00808	0.87	+0.5
825,057	+		EFB2_00808	0.87	+2.1
825,057	+		EFB2_00808	0.87	+1.4
825,057	+		EFB2_00808	0.87	+0.2
825,057	+		EFB2_00808	0.87	-2.2
825,057	+		EFB2_00808	0.87	+0.8
825,057	+		EFB2_00808	0.87	+1.3
825,057	+		EFB2_00808	0.87	-0.7
825,057	+		EFB2_00808	0.87	-0.1
825,057	+		EFB2_00808	0.87	+0.9
825,057	+		EFB2_00808	0.87	-0.8
825,057	+		EFB2_00808	0.87	+0.1
825,057	+		EFB2_00808	0.87	+1.0
825,057	+		EFB2_00808	0.87	+0.4
825,057	+		EFB2_00808	0.87	-0.1
825,057	+		EFB2_00808	0.87	-0.7
825,057	+		EFB2_00808	0.87	-2.1
825,057	+		EFB2_00808	0.87	+0.6
825,057	+		EFB2_00808	0.87	-1.1
825,057	+		EFB2_00808	0.87	-0.8
825,058	-		EFB2_00808	0.87	+0.0
825,058	-		EFB2_00808	0.87	-1.3
825,058	-		EFB2_00808	0.87	-0.6
825,058	-		EFB2_00808	0.87	-0.6
825,058	-		EFB2_00808	0.87	-1.0
825,058	-		EFB2_00808	0.87	+0.6
825,058	-		EFB2_00808	0.87	+0.1
825,058	-		EFB2_00808	0.87	+0.0
825,058	-		EFB2_00808	0.87	-0.6
825,058	-		EFB2_00808	0.87	+1.7
825,058	-		EFB2_00808	0.87	+0.6
825,058	-		EFB2_00808	0.87	-0.4
825,058	-		EFB2_00808	0.87	-2.3
825,058	-		EFB2_00808	0.87	-0.0
825,058	-		EFB2_00808	0.87	+1.4
825,058	-		EFB2_00808	0.87	-2.8
825,058	-		EFB2_00808	0.87	-0.2
825,058	-		EFB2_00808	0.87	-1.2
825,058	-		EFB2_00808	0.87	+1.8
825,058	-		EFB2_00808	0.87	-0.7
825,058	-		EFB2_00808	0.87	-0.2
825,058	-		EFB2_00808	0.87	-1.0
825,058	-		EFB2_00808	0.87	+0.2
825,061	+		EFB2_00808	0.87	+0.4
825,062	-		EFB2_00808	0.87	-1.2
825,106	+				+0.5
825,107	-				+0.9
825,107	-				-0.4
825,107	-				+1.5
825,159	+				-0.0
825,163	+				+0.2
825,163	+				-1.0
825,163	+				-0.1
825,163	+				-3.4
825,163	+				-0.0
825,163	+				-1.3
825,163	+				-0.8
825,163	+				+0.9
825,164	-				+0.2
825,164	-				+0.1
825,164	-				+0.0
825,164	-				-1.9
825,175	+				+0.1
825,176	-				+1.7
825,181	+				+0.1
825,182	-				+0.5
825,182	-				+1.5
825,182	-				+0.1
825,182	-				+0.1
825,197	-				-1.1
825,204	-				-1.4
825,222	-				-3.4
825,261	+				-0.7
825,262	-				+1.4
825,262	-				+1.0
825,262	-				-0.9
825,263	+				-0.7
825,263	+				+3.0
825,264	-				-1.5
825,271	+				+0.9
825,272	-				+0.6
825,273	+				+2.3
825,273	+				-0.3
825,273	+				+1.5
825,274	-				-0.1
825,299	-				-3.1
825,299	-				-0.9
825,311	-				-2.3
825,311	-				-1.5
825,318	+				+0.3
825,319	-				-0.4
825,319	-				-0.8
825,330	+		EFB2_00809	0.13	+1.2
825,358	+		EFB2_00809	0.23	-0.0
825,371	+		EFB2_00809	0.27	-0.4
825,371	+		EFB2_00809	0.27	-1.2
825,371	+		EFB2_00809	0.27	-0.7
825,371	+		EFB2_00809	0.27	-1.2
825,371	+		EFB2_00809	0.27	-0.1
825,371	+		EFB2_00809	0.27	+0.8
825,372	-		EFB2_00809	0.27	+0.3
825,372	-		EFB2_00809	0.27	+0.2
825,372	-		EFB2_00809	0.27	+1.7
825,372	-		EFB2_00809	0.27	+0.3
825,372	-		EFB2_00809	0.27	-0.9
825,383	+		EFB2_00809	0.31	+0.7
825,385	+		EFB2_00809	0.32	+1.1
825,386	-		EFB2_00809	0.32	+1.1
825,399	+		EFB2_00809	0.37	-0.4
825,399	+		EFB2_00809	0.37	-3.2
825,400	-		EFB2_00809	0.37	-0.6
825,400	-		EFB2_00809	0.37	-1.7
825,402	+		EFB2_00809	0.38	-0.8
825,402	+		EFB2_00809	0.38	+0.4
825,402	+		EFB2_00809	0.38	+0.9
825,402	+		EFB2_00809	0.38	+1.1
825,402	+		EFB2_00809	0.38	-1.0
825,402	+		EFB2_00809	0.38	-1.1
825,403	-		EFB2_00809	0.38	+1.9
825,403	-		EFB2_00809	0.38	-1.8
825,403	-		EFB2_00809	0.38	+0.1
825,403	-		EFB2_00809	0.38	+0.7
825,403	-		EFB2_00809	0.38	-1.5
825,403	-		EFB2_00809	0.38	-2.3
825,403	-		EFB2_00809	0.38	-2.1
825,407	+		EFB2_00809	0.40	+0.6
825,408	-		EFB2_00809	0.40	+1.2
825,422	+		EFB2_00809	0.45	+0.5
825,422	+		EFB2_00809	0.45	-2.4
825,422	+		EFB2_00809	0.45	+0.4
825,422	+		EFB2_00809	0.45	+0.2
825,423	-		EFB2_00809	0.45	+0.8
825,423	-		EFB2_00809	0.45	-2.0
825,423	-		EFB2_00809	0.45	-0.3
825,448	+		EFB2_00809	0.54	-3.6
825,449	-		EFB2_00809	0.54	+0.9
825,449	-		EFB2_00809	0.54	+1.0
825,504	+		EFB2_00809	0.73	-0.1
825,504	+		EFB2_00809	0.73	-0.2
825,505	-		EFB2_00809	0.74	-2.1
825,505	-		EFB2_00809	0.74	+0.4
825,538	+		EFB2_00809	0.85	+1.9
825,538	+		EFB2_00809	0.85	+0.7
825,539	-		EFB2_00809	0.85	+0.1
825,539	-		EFB2_00809	0.85	+1.4
825,539	-		EFB2_00809	0.85	-1.3
825,539	-		EFB2_00809	0.85	+1.4
825,539	-		EFB2_00809	0.85	-0.9
825,553	+				+1.5
825,588	+				+0.3
825,588	+				+0.2
825,588	+				-2.3
825,588	+				-0.4
825,588	+				+0.0
825,588	+				+0.1
825,588	+				-0.8
825,589	-				+0.1
825,589	-				-0.9
825,592	+				+0.1
825,592	+				-1.2
825,592	+				+2.3
825,592	+				-0.6
825,592	+				-0.5
825,592	+				+1.5
825,592	+				+0.4
825,592	+				+1.5
825,592	+				-1.2
825,592	+				-1.5
825,592	+				-0.9
825,592	+				+0.8
825,592	+				+0.6
825,592	+				-3.9
825,592	+				-2.8
825,592	+				-0.4
825,592	+				+1.5
825,592	+				+0.4
825,593	-				-2.7
825,593	-				+0.0
825,593	-				+0.3
825,593	-				+0.8
825,593	-				+0.2
825,593	-				+0.3
825,593	-				-0.5
825,593	-				+0.7
825,593	-				-0.3
825,593	-				-0.4
825,593	-				+0.7
825,593	-				-0.6
825,595	+				+0.3
825,595	+				+1.2
825,595	+				-0.1
825,595	+				+0.3
825,595	+				-2.8
825,595	+				+1.5
825,595	+				+1.4
825,596	-				+0.8
825,596	-				+0.2
825,596	-				+2.3
825,596	-				-0.5
825,605	+				+0.8
825,605	+				-3.5
825,605	+				-1.2
825,606	-				+0.5
825,606	-				+1.0
825,606	-				+0.3
825,606	-				+0.1
825,606	-				-0.5
825,606	-				-0.1
825,610	-				-0.9
825,613	+				-4.1
825,614	-				+2.0
825,614	-				-2.0
825,614	-				+1.4
825,614	-				-0.6
825,618	+				+1.5
825,618	+				-1.2
825,618	+				+0.7
825,618	+				+0.0
825,618	+				+0.9
825,619	-				+0.8
825,619	-				-0.8
825,619	-				+0.3
825,619	-				-0.3
825,619	-				-2.1
825,639	+				+0.1
825,639	+				-0.3
825,640	-				+0.1
825,655	+				-1.6
825,655	+				-0.2
825,655	+				-3.0
825,655	+				-1.8
825,656	-				-2.0
825,678	+				-1.5
825,679	-				-1.5
825,690	-				-0.5
825,690	-				-0.1
825,711	-				-1.4
825,735	+				-1.2
825,735	+				-0.8
825,735	+				-0.8
825,735	+				-0.3
825,736	-				+1.3
825,736	-				-0.2
825,736	-				-0.9
825,737	+				+0.5
825,737	+				+0.1
825,737	+				-2.2
825,737	+				-0.9
825,737	+				-0.1
825,738	-				-2.0
825,738	-				+0.2
825,738	-				-1.0
825,760	+				+1.0
825,760	+				-2.0
825,760	+				+0.6
825,760	+				-3.3
825,760	+				-1.3
825,760	+				+0.4
825,760	+				-0.8
825,761	-				+0.1
825,761	-				-0.6
825,761	-				-0.0
825,764	+				-0.5
825,764	+				+0.2
825,764	+				-0.4
825,764	+				+0.6
825,764	+				+0.4
825,764	+				+0.2
825,764	+				+0.6
825,764	+				-1.3
825,764	+				+0.6
825,764	+				+0.6
825,764	+				+1.7
825,764	+				+2.5
825,764	+				+1.8
825,764	+				+0.7
825,764	+				-2.5
825,765	-				+0.1
825,765	-				+0.5
825,765	-				+0.2
825,765	-				-3.6
825,765	-				-2.3
825,765	-				-1.6
825,765	-				-0.5
825,766	+				+0.0
825,766	+				+0.5
825,766	+				+0.5
825,766	+				+0.6
825,766	+				+0.9
825,766	+				+2.5
825,766	+				-3.9
825,766	+				-0.1
825,766	+				-0.4
825,766	+				-1.2
825,766	+				+0.4
825,766	+				+0.6
825,766	+				+0.2
825,766	+				+0.6
825,766	+				+0.3
825,766	+				+0.8
825,766	+				-1.6
825,766	+				-2.6
825,766	+				+0.9
825,767	-				-0.1
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