Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05309

Experiment: Arabinoxylan (Rye Flour) 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Arabinoxylan (Rye Flour) 2.5 mg/mL (C)
797,277	+		BACOVA_05307	0.53	+1.1
797,300	+		BACOVA_05307	0.57	+0.5
797,300	+		BACOVA_05307	0.57	-1.4
797,307	+		BACOVA_05307	0.59	+0.2
797,308	-		BACOVA_05307	0.59	+0.6
797,316	+		BACOVA_05307	0.60	+0.9
797,317	-		BACOVA_05307	0.60	+1.6
797,403	-		BACOVA_05307	0.77	-0.2
797,482	-				+0.1
797,534	+				-1.3
797,535	-				+0.6
797,538	+				+0.4
797,538	+				+2.2
797,556	+				-1.0
797,576	+				-2.4
797,577	-				+1.2
797,617	-				+1.1
797,617	-				+0.5
797,620	+				+0.5
797,621	-				+0.3
797,692	+				+0.7
797,692	+				+0.3
797,704	+		BACOVA_05308	0.12	-0.3
797,742	-		BACOVA_05308	0.21	-0.2
797,788	+		BACOVA_05308	0.31	-0.4
797,789	-		BACOVA_05308	0.31	-0.9
797,809	+		BACOVA_05308	0.35	-1.1
797,810	-		BACOVA_05308	0.35	-1.8
797,813	+		BACOVA_05308	0.36	-1.0
797,826	-		BACOVA_05308	0.39	+1.2
797,826	-		BACOVA_05308	0.39	-0.2
797,869	-		BACOVA_05308	0.48	-1.5
797,894	-		BACOVA_05308	0.53	-0.2
797,897	+		BACOVA_05308	0.54	-1.1
797,898	-		BACOVA_05308	0.54	+0.6
797,919	+		BACOVA_05308	0.59	-0.6
797,920	-		BACOVA_05308	0.59	+1.1
797,920	-		BACOVA_05308	0.59	+0.4
797,954	-		BACOVA_05308	0.66	+1.4
797,984	+		BACOVA_05308	0.73	-0.2
798,088	+				-0.1
798,089	-				+0.8
798,096	+				+0.3
798,159	-				+1.2
798,313	-				-0.9
798,316	+				-0.6
798,316	+				-1.3
798,317	-				+1.1
798,375	+		BACOVA_05309	0.16	-0.4
798,375	+		BACOVA_05309	0.16	-0.8
798,379	-		BACOVA_05309	0.16	-0.7
798,405	-		BACOVA_05309	0.19	+0.9
798,482	+		BACOVA_05309	0.27	+0.2
798,496	-		BACOVA_05309	0.29	+1.5
798,514	+		BACOVA_05309	0.30	-0.0
798,529	+		BACOVA_05309	0.32	+0.2
798,529	+		BACOVA_05309	0.32	+0.6
798,542	+		BACOVA_05309	0.33	+0.3
798,671	+		BACOVA_05309	0.47	-0.8
798,671	+		BACOVA_05309	0.47	+0.4
798,671	+		BACOVA_05309	0.47	-0.8
798,671	+		BACOVA_05309	0.47	-0.4
798,735	+		BACOVA_05309	0.54	-0.5
798,736	-		BACOVA_05309	0.54	-0.3
798,736	-		BACOVA_05309	0.54	+0.7
798,737	+		BACOVA_05309	0.54	+0.1
798,826	+		BACOVA_05309	0.63	+1.2
798,891	+		BACOVA_05309	0.70	-0.4
798,892	-		BACOVA_05309	0.70	-0.6
798,892	-		BACOVA_05309	0.70	-1.5
798,893	+		BACOVA_05309	0.71	-0.1
798,894	-		BACOVA_05309	0.71	-0.1
798,894	-		BACOVA_05309	0.71	-0.4
798,968	-		BACOVA_05309	0.79	-1.5
799,046	+		BACOVA_05309	0.87	+0.1
799,111	+				+0.9
799,111	+				+0.9
799,112	-				-1.2
799,150	-				-0.3
799,220	-				-0.7
799,234	+				+0.1
799,235	-				-1.2
799,235	-				-0.0
799,236	+				+0.8
799,236	+				+0.4
799,237	-				+0.2
799,254	+				-0.4
799,255	-				+0.1
799,314	+				+1.5
799,315	-				-0.9
799,325	+				+0.2
799,326	-				-0.4
799,330	-				+0.2
799,343	-				-0.4
799,343	-				+0.9
799,343	-				-1.5
799,361	+				-0.9
799,361	+				-0.6
799,362	-				+0.4
799,362	-				+0.8
799,364	+				+1.2
799,373	-				+0.5
799,373	-				+0.1
799,426	+				+0.2
799,524	-		BACOVA_05310	0.18	+1.9
799,626	-		BACOVA_05310	0.35	-0.8
799,667	+		BACOVA_05310	0.41	+0.1
799,749	-		BACOVA_05310	0.54	-0.1
799,770	-		BACOVA_05310	0.57	+0.6
799,778	+		BACOVA_05310	0.59	+0.1
799,860	-		BACOVA_05310	0.72	-0.4
799,862	+		BACOVA_05310	0.72	-1.1
799,869	-		BACOVA_05310	0.73	+0.3
799,888	+		BACOVA_05310	0.76	+0.3
799,953	-		BACOVA_05310	0.86	-0.9
800,006	+				+0.1
800,006	+				+0.0
800,006	+				+0.0
800,006	+				-1.3
800,006	+				-1.1
800,007	-				-0.4
800,007	-				-1.8
800,007	-				+0.9
800,007	-				+1.4
800,007	-				-1.5
800,007	-				+0.4
800,007	-				-0.6
800,008	+				-0.0
800,018	-				+0.5
800,033	-				+0.1
800,038	-				+0.3