Experiment: mer MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02323 and OHPLBJKB_02324 are separated by 284 nucleotides OHPLBJKB_02324 and OHPLBJKB_02325 are separated by 247 nucleotides
OHPLBJKB_02323: OHPLBJKB_02323 - 1,2-phenylacetyl-CoA epoxidase, subunit A, at 2,424,595 to 2,425,524
_02323
OHPLBJKB_02324: OHPLBJKB_02324 - Bifunctional protein PaaZ, at 2,425,809 to 2,427,854
_02324
OHPLBJKB_02325: OHPLBJKB_02325 - Primary amine oxidase, at 2,428,102 to 2,430,375
_02325
Position (kb)
2425
2426
2427
2428 Strain fitness (log2 ratio)
-2
-1
0
1 at 2424.924 kb on + strand, within OHPLBJKB_02323 at 2424.924 kb on + strand, within OHPLBJKB_02323 at 2424.925 kb on - strand, within OHPLBJKB_02323 at 2424.950 kb on - strand, within OHPLBJKB_02323 at 2424.950 kb on - strand, within OHPLBJKB_02323 at 2424.973 kb on - strand, within OHPLBJKB_02323 at 2425.094 kb on + strand, within OHPLBJKB_02323 at 2425.095 kb on - strand, within OHPLBJKB_02323 at 2425.104 kb on - strand, within OHPLBJKB_02323 at 2425.173 kb on + strand, within OHPLBJKB_02323 at 2425.245 kb on - strand, within OHPLBJKB_02323 at 2425.292 kb on + strand, within OHPLBJKB_02323 at 2425.293 kb on - strand, within OHPLBJKB_02323 at 2425.293 kb on - strand, within OHPLBJKB_02323 at 2425.293 kb on - strand, within OHPLBJKB_02323 at 2425.374 kb on + strand, within OHPLBJKB_02323 at 2425.389 kb on + strand, within OHPLBJKB_02323 at 2425.389 kb on + strand, within OHPLBJKB_02323 at 2425.390 kb on - strand, within OHPLBJKB_02323 at 2425.390 kb on - strand, within OHPLBJKB_02323 at 2425.390 kb on - strand, within OHPLBJKB_02323 at 2425.558 kb on + strand at 2425.559 kb on - strand at 2425.562 kb on + strand at 2425.804 kb on + strand at 2425.929 kb on - strand at 2426.055 kb on + strand, within OHPLBJKB_02324 at 2426.055 kb on + strand, within OHPLBJKB_02324 at 2426.055 kb on + strand, within OHPLBJKB_02324 at 2426.055 kb on + strand, within OHPLBJKB_02324 at 2426.056 kb on - strand, within OHPLBJKB_02324 at 2426.128 kb on + strand, within OHPLBJKB_02324 at 2426.128 kb on + strand, within OHPLBJKB_02324 at 2426.129 kb on - strand, within OHPLBJKB_02324 at 2426.137 kb on - strand, within OHPLBJKB_02324 at 2426.137 kb on - strand, within OHPLBJKB_02324 at 2426.236 kb on + strand, within OHPLBJKB_02324 at 2426.237 kb on - strand, within OHPLBJKB_02324 at 2426.267 kb on + strand, within OHPLBJKB_02324 at 2426.267 kb on + strand, within OHPLBJKB_02324 at 2426.280 kb on - strand, within OHPLBJKB_02324 at 2426.433 kb on - strand, within OHPLBJKB_02324 at 2426.433 kb on - strand, within OHPLBJKB_02324 at 2426.544 kb on - strand, within OHPLBJKB_02324 at 2426.912 kb on - strand, within OHPLBJKB_02324 at 2426.944 kb on + strand, within OHPLBJKB_02324 at 2426.944 kb on + strand, within OHPLBJKB_02324 at 2426.944 kb on + strand, within OHPLBJKB_02324 at 2426.945 kb on - strand, within OHPLBJKB_02324 at 2426.945 kb on - strand, within OHPLBJKB_02324 at 2426.949 kb on + strand, within OHPLBJKB_02324 at 2426.950 kb on - strand, within OHPLBJKB_02324 at 2426.950 kb on - strand, within OHPLBJKB_02324 at 2427.140 kb on + strand, within OHPLBJKB_02324 at 2427.141 kb on - strand, within OHPLBJKB_02324 at 2427.220 kb on + strand, within OHPLBJKB_02324 at 2427.221 kb on - strand, within OHPLBJKB_02324 at 2427.260 kb on - strand, within OHPLBJKB_02324 at 2427.268 kb on + strand, within OHPLBJKB_02324 at 2427.285 kb on + strand, within OHPLBJKB_02324 at 2427.285 kb on + strand, within OHPLBJKB_02324 at 2427.286 kb on - strand, within OHPLBJKB_02324 at 2427.286 kb on - strand, within OHPLBJKB_02324 at 2427.304 kb on + strand, within OHPLBJKB_02324 at 2427.304 kb on + strand, within OHPLBJKB_02324 at 2427.312 kb on - strand, within OHPLBJKB_02324 at 2427.377 kb on + strand, within OHPLBJKB_02324 at 2427.378 kb on - strand, within OHPLBJKB_02324 at 2427.396 kb on + strand, within OHPLBJKB_02324 at 2427.462 kb on - strand, within OHPLBJKB_02324 at 2427.499 kb on - strand, within OHPLBJKB_02324 at 2427.506 kb on + strand, within OHPLBJKB_02324 at 2427.506 kb on + strand, within OHPLBJKB_02324 at 2427.506 kb on + strand, within OHPLBJKB_02324 at 2427.506 kb on + strand, within OHPLBJKB_02324 at 2427.506 kb on + strand, within OHPLBJKB_02324 at 2427.507 kb on - strand, within OHPLBJKB_02324 at 2427.507 kb on - strand, within OHPLBJKB_02324 at 2427.507 kb on - strand, within OHPLBJKB_02324 at 2427.507 kb on - strand, within OHPLBJKB_02324 at 2427.561 kb on + strand, within OHPLBJKB_02324 at 2427.624 kb on - strand, within OHPLBJKB_02324 at 2427.627 kb on + strand, within OHPLBJKB_02324 at 2427.628 kb on - strand, within OHPLBJKB_02324 at 2427.628 kb on - strand, within OHPLBJKB_02324 at 2427.628 kb on - strand, within OHPLBJKB_02324 at 2427.628 kb on - strand, within OHPLBJKB_02324 at 2427.766 kb on + strand at 2427.766 kb on + strand at 2427.773 kb on - strand at 2427.852 kb on + strand at 2427.881 kb on - strand at 2427.881 kb on - strand at 2427.893 kb on - strand at 2427.936 kb on + strand at 2427.936 kb on + strand at 2427.936 kb on + strand at 2427.936 kb on + strand at 2427.936 kb on + strand at 2427.937 kb on - strand at 2427.937 kb on - strand at 2427.937 kb on - strand at 2427.937 kb on - strand at 2427.937 kb on - strand at 2427.937 kb on - strand at 2427.937 kb on - strand at 2427.937 kb on - strand at 2427.937 kb on - strand at 2427.937 kb on - strand at 2427.942 kb on + strand at 2427.943 kb on - strand at 2428.045 kb on + strand at 2428.098 kb on - strand at 2428.224 kb on + strand at 2428.225 kb on - strand at 2428.304 kb on - strand at 2428.304 kb on - strand at 2428.389 kb on + strand, within OHPLBJKB_02325 at 2428.413 kb on + strand, within OHPLBJKB_02325 at 2428.479 kb on + strand, within OHPLBJKB_02325 at 2428.479 kb on + strand, within OHPLBJKB_02325 at 2428.480 kb on - strand, within OHPLBJKB_02325 at 2428.504 kb on - strand, within OHPLBJKB_02325 at 2428.588 kb on - strand, within OHPLBJKB_02325 at 2428.588 kb on - strand, within OHPLBJKB_02325 at 2428.657 kb on - strand, within OHPLBJKB_02325 at 2428.674 kb on + strand, within OHPLBJKB_02325 at 2428.674 kb on + strand, within OHPLBJKB_02325 at 2428.675 kb on - strand, within OHPLBJKB_02325 at 2428.675 kb on - strand, within OHPLBJKB_02325 at 2428.675 kb on - strand, within OHPLBJKB_02325 at 2428.785 kb on + strand, within OHPLBJKB_02325 at 2428.786 kb on - strand, within OHPLBJKB_02325 at 2428.788 kb on + strand, within OHPLBJKB_02325 at 2428.788 kb on + strand, within OHPLBJKB_02325 at 2428.789 kb on - strand, within OHPLBJKB_02325 at 2428.833 kb on + strand, within OHPLBJKB_02325 at 2428.833 kb on + strand, within OHPLBJKB_02325 at 2428.833 kb on + strand, within OHPLBJKB_02325 at 2428.834 kb on - strand, within OHPLBJKB_02325
Per-strain Table
Position Strand Gene LocusTag Fraction mer MOI10 remove 2,424,924 + OHPLBJKB_02323 0.35 -0.9 2,424,924 + OHPLBJKB_02323 0.35 -0.2 2,424,925 - OHPLBJKB_02323 0.35 -0.2 2,424,950 - OHPLBJKB_02323 0.38 +0.5 2,424,950 - OHPLBJKB_02323 0.38 +1.0 2,424,973 - OHPLBJKB_02323 0.41 +0.6 2,425,094 + OHPLBJKB_02323 0.54 +0.3 2,425,095 - OHPLBJKB_02323 0.54 +0.2 2,425,104 - OHPLBJKB_02323 0.55 -1.7 2,425,173 + OHPLBJKB_02323 0.62 +0.7 2,425,245 - OHPLBJKB_02323 0.70 -0.6 2,425,292 + OHPLBJKB_02323 0.75 +0.1 2,425,293 - OHPLBJKB_02323 0.75 +0.4 2,425,293 - OHPLBJKB_02323 0.75 -0.5 2,425,293 - OHPLBJKB_02323 0.75 -0.1 2,425,374 + OHPLBJKB_02323 0.84 +1.0 2,425,389 + OHPLBJKB_02323 0.85 -1.5 2,425,389 + OHPLBJKB_02323 0.85 -0.5 2,425,390 - OHPLBJKB_02323 0.85 -0.2 2,425,390 - OHPLBJKB_02323 0.85 -0.1 2,425,390 - OHPLBJKB_02323 0.85 +0.5 2,425,558 + -0.3 2,425,559 - +0.1 2,425,562 + +0.2 2,425,804 + +1.5 2,425,929 - -0.3 2,426,055 + OHPLBJKB_02324 0.12 -0.2 2,426,055 + OHPLBJKB_02324 0.12 +0.7 2,426,055 + OHPLBJKB_02324 0.12 -0.7 2,426,055 + OHPLBJKB_02324 0.12 +0.6 2,426,056 - OHPLBJKB_02324 0.12 +0.6 2,426,128 + OHPLBJKB_02324 0.16 +0.8 2,426,128 + OHPLBJKB_02324 0.16 +0.1 2,426,129 - OHPLBJKB_02324 0.16 +0.1 2,426,137 - OHPLBJKB_02324 0.16 +0.6 2,426,137 - OHPLBJKB_02324 0.16 +0.3 2,426,236 + OHPLBJKB_02324 0.21 -0.0 2,426,237 - OHPLBJKB_02324 0.21 -0.6 2,426,267 + OHPLBJKB_02324 0.22 -0.6 2,426,267 + OHPLBJKB_02324 0.22 +0.6 2,426,280 - OHPLBJKB_02324 0.23 +0.2 2,426,433 - OHPLBJKB_02324 0.30 -0.0 2,426,433 - OHPLBJKB_02324 0.30 -0.7 2,426,544 - OHPLBJKB_02324 0.36 -0.9 2,426,912 - OHPLBJKB_02324 0.54 -0.0 2,426,944 + OHPLBJKB_02324 0.55 +0.2 2,426,944 + OHPLBJKB_02324 0.55 -0.2 2,426,944 + OHPLBJKB_02324 0.55 -0.9 2,426,945 - OHPLBJKB_02324 0.56 +0.8 2,426,945 - OHPLBJKB_02324 0.56 -0.1 2,426,949 + OHPLBJKB_02324 0.56 +0.7 2,426,950 - OHPLBJKB_02324 0.56 -0.1 2,426,950 - OHPLBJKB_02324 0.56 +0.6 2,427,140 + OHPLBJKB_02324 0.65 -0.5 2,427,141 - OHPLBJKB_02324 0.65 -0.3 2,427,220 + OHPLBJKB_02324 0.69 +1.1 2,427,221 - OHPLBJKB_02324 0.69 -0.4 2,427,260 - OHPLBJKB_02324 0.71 -0.5 2,427,268 + OHPLBJKB_02324 0.71 -1.0 2,427,285 + OHPLBJKB_02324 0.72 -0.4 2,427,285 + OHPLBJKB_02324 0.72 -0.3 2,427,286 - OHPLBJKB_02324 0.72 +0.3 2,427,286 - OHPLBJKB_02324 0.72 +0.8 2,427,304 + OHPLBJKB_02324 0.73 +1.4 2,427,304 + OHPLBJKB_02324 0.73 -0.6 2,427,312 - OHPLBJKB_02324 0.73 +0.1 2,427,377 + OHPLBJKB_02324 0.77 -1.5 2,427,378 - OHPLBJKB_02324 0.77 +0.0 2,427,396 + OHPLBJKB_02324 0.78 +1.0 2,427,462 - OHPLBJKB_02324 0.81 +0.1 2,427,499 - OHPLBJKB_02324 0.83 +0.7 2,427,506 + OHPLBJKB_02324 0.83 -0.7 2,427,506 + OHPLBJKB_02324 0.83 +0.4 2,427,506 + OHPLBJKB_02324 0.83 +0.9 2,427,506 + OHPLBJKB_02324 0.83 +0.5 2,427,506 + OHPLBJKB_02324 0.83 +0.6 2,427,507 - OHPLBJKB_02324 0.83 +0.5 2,427,507 - OHPLBJKB_02324 0.83 +0.5 2,427,507 - OHPLBJKB_02324 0.83 +1.0 2,427,507 - OHPLBJKB_02324 0.83 -2.4 2,427,561 + OHPLBJKB_02324 0.86 -0.1 2,427,624 - OHPLBJKB_02324 0.89 +0.2 2,427,627 + OHPLBJKB_02324 0.89 -0.2 2,427,628 - OHPLBJKB_02324 0.89 +0.1 2,427,628 - OHPLBJKB_02324 0.89 +0.8 2,427,628 - OHPLBJKB_02324 0.89 +0.1 2,427,628 - OHPLBJKB_02324 0.89 -0.3 2,427,766 + +0.7 2,427,766 + -1.3 2,427,773 - +1.3 2,427,852 + -0.0 2,427,881 - -0.1 2,427,881 - -0.1 2,427,893 - -0.9 2,427,936 + -0.8 2,427,936 + -0.1 2,427,936 + -0.3 2,427,936 + -0.1 2,427,936 + -1.7 2,427,937 - +0.2 2,427,937 - +1.2 2,427,937 - -0.3 2,427,937 - +0.5 2,427,937 - +0.1 2,427,937 - -0.5 2,427,937 - +0.1 2,427,937 - -0.2 2,427,937 - +0.1 2,427,937 - +0.3 2,427,942 + -0.2 2,427,943 - +0.6 2,428,045 + -1.1 2,428,098 - -0.1 2,428,224 + -0.9 2,428,225 - +0.4 2,428,304 - -1.1 2,428,304 - -0.7 2,428,389 + OHPLBJKB_02325 0.13 -0.7 2,428,413 + OHPLBJKB_02325 0.14 -0.4 2,428,479 + OHPLBJKB_02325 0.17 -0.3 2,428,479 + OHPLBJKB_02325 0.17 +0.3 2,428,480 - OHPLBJKB_02325 0.17 +0.4 2,428,504 - OHPLBJKB_02325 0.18 -0.4 2,428,588 - OHPLBJKB_02325 0.21 -1.5 2,428,588 - OHPLBJKB_02325 0.21 -0.2 2,428,657 - OHPLBJKB_02325 0.24 -0.7 2,428,674 + OHPLBJKB_02325 0.25 +0.2 2,428,674 + OHPLBJKB_02325 0.25 +1.5 2,428,675 - OHPLBJKB_02325 0.25 +1.1 2,428,675 - OHPLBJKB_02325 0.25 +0.3 2,428,675 - OHPLBJKB_02325 0.25 +0.7 2,428,785 + OHPLBJKB_02325 0.30 +0.3 2,428,786 - OHPLBJKB_02325 0.30 -0.9 2,428,788 + OHPLBJKB_02325 0.30 +0.3 2,428,788 + OHPLBJKB_02325 0.30 -0.3 2,428,789 - OHPLBJKB_02325 0.30 -0.2 2,428,833 + OHPLBJKB_02325 0.32 +0.7 2,428,833 + OHPLBJKB_02325 0.32 +1.6 2,428,833 + OHPLBJKB_02325 0.32 -1.9 2,428,834 - OHPLBJKB_02325 0.32 +1.3
Or see this region's nucleotide sequence