Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02324

Experiment: mer MOI10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02323 and OHPLBJKB_02324 are separated by 284 nucleotidesOHPLBJKB_02324 and OHPLBJKB_02325 are separated by 247 nucleotides OHPLBJKB_02323: OHPLBJKB_02323 - 1,2-phenylacetyl-CoA epoxidase, subunit A, at 2,424,595 to 2,425,524 _02323 OHPLBJKB_02324: OHPLBJKB_02324 - Bifunctional protein PaaZ, at 2,425,809 to 2,427,854 _02324 OHPLBJKB_02325: OHPLBJKB_02325 - Primary amine oxidase, at 2,428,102 to 2,430,375 _02325 Position (kb) 2425 2426 2427 2428Strain fitness (log2 ratio) -2 -1 0 1at 2424.924 kb on + strand, within OHPLBJKB_02323at 2424.924 kb on + strand, within OHPLBJKB_02323at 2424.925 kb on - strand, within OHPLBJKB_02323at 2424.950 kb on - strand, within OHPLBJKB_02323at 2424.950 kb on - strand, within OHPLBJKB_02323at 2424.973 kb on - strand, within OHPLBJKB_02323at 2425.094 kb on + strand, within OHPLBJKB_02323at 2425.095 kb on - strand, within OHPLBJKB_02323at 2425.104 kb on - strand, within OHPLBJKB_02323at 2425.173 kb on + strand, within OHPLBJKB_02323at 2425.245 kb on - strand, within OHPLBJKB_02323at 2425.292 kb on + strand, within OHPLBJKB_02323at 2425.293 kb on - strand, within OHPLBJKB_02323at 2425.293 kb on - strand, within OHPLBJKB_02323at 2425.293 kb on - strand, within OHPLBJKB_02323at 2425.374 kb on + strand, within OHPLBJKB_02323at 2425.389 kb on + strand, within OHPLBJKB_02323at 2425.389 kb on + strand, within OHPLBJKB_02323at 2425.390 kb on - strand, within OHPLBJKB_02323at 2425.390 kb on - strand, within OHPLBJKB_02323at 2425.390 kb on - strand, within OHPLBJKB_02323at 2425.558 kb on + strandat 2425.559 kb on - strandat 2425.562 kb on + strandat 2425.804 kb on + strandat 2425.929 kb on - strandat 2426.055 kb on + strand, within OHPLBJKB_02324at 2426.055 kb on + strand, within OHPLBJKB_02324at 2426.055 kb on + strand, within OHPLBJKB_02324at 2426.055 kb on + strand, within OHPLBJKB_02324at 2426.056 kb on - strand, within OHPLBJKB_02324at 2426.128 kb on + strand, within OHPLBJKB_02324at 2426.128 kb on + strand, within OHPLBJKB_02324at 2426.129 kb on - strand, within OHPLBJKB_02324at 2426.137 kb on - strand, within OHPLBJKB_02324at 2426.137 kb on - strand, within OHPLBJKB_02324at 2426.236 kb on + strand, within OHPLBJKB_02324at 2426.237 kb on - strand, within OHPLBJKB_02324at 2426.267 kb on + strand, within OHPLBJKB_02324at 2426.267 kb on + strand, within OHPLBJKB_02324at 2426.280 kb on - strand, within OHPLBJKB_02324at 2426.433 kb on - strand, within OHPLBJKB_02324at 2426.433 kb on - strand, within OHPLBJKB_02324at 2426.544 kb on - strand, within OHPLBJKB_02324at 2426.912 kb on - strand, within OHPLBJKB_02324at 2426.944 kb on + strand, within OHPLBJKB_02324at 2426.944 kb on + strand, within OHPLBJKB_02324at 2426.944 kb on + strand, within OHPLBJKB_02324at 2426.945 kb on - strand, within OHPLBJKB_02324at 2426.945 kb on - strand, within OHPLBJKB_02324at 2426.949 kb on + strand, within OHPLBJKB_02324at 2426.950 kb on - strand, within OHPLBJKB_02324at 2426.950 kb on - strand, within OHPLBJKB_02324at 2427.140 kb on + strand, within OHPLBJKB_02324at 2427.141 kb on - strand, within OHPLBJKB_02324at 2427.220 kb on + strand, within OHPLBJKB_02324at 2427.221 kb on - strand, within OHPLBJKB_02324at 2427.260 kb on - strand, within OHPLBJKB_02324at 2427.268 kb on + strand, within OHPLBJKB_02324at 2427.285 kb on + strand, within OHPLBJKB_02324at 2427.285 kb on + strand, within OHPLBJKB_02324at 2427.286 kb on - strand, within OHPLBJKB_02324at 2427.286 kb on - strand, within OHPLBJKB_02324at 2427.304 kb on + strand, within OHPLBJKB_02324at 2427.304 kb on + strand, within OHPLBJKB_02324at 2427.312 kb on - strand, within OHPLBJKB_02324at 2427.377 kb on + strand, within OHPLBJKB_02324at 2427.378 kb on - strand, within OHPLBJKB_02324at 2427.396 kb on + strand, within OHPLBJKB_02324at 2427.462 kb on - strand, within OHPLBJKB_02324at 2427.499 kb on - strand, within OHPLBJKB_02324at 2427.506 kb on + strand, within OHPLBJKB_02324at 2427.506 kb on + strand, within OHPLBJKB_02324at 2427.506 kb on + strand, within OHPLBJKB_02324at 2427.506 kb on + strand, within OHPLBJKB_02324at 2427.506 kb on + strand, within OHPLBJKB_02324at 2427.507 kb on - strand, within OHPLBJKB_02324at 2427.507 kb on - strand, within OHPLBJKB_02324at 2427.507 kb on - strand, within OHPLBJKB_02324at 2427.507 kb on - strand, within OHPLBJKB_02324at 2427.561 kb on + strand, within OHPLBJKB_02324at 2427.624 kb on - strand, within OHPLBJKB_02324at 2427.627 kb on + strand, within OHPLBJKB_02324at 2427.628 kb on - strand, within OHPLBJKB_02324at 2427.628 kb on - strand, within OHPLBJKB_02324at 2427.628 kb on - strand, within OHPLBJKB_02324at 2427.628 kb on - strand, within OHPLBJKB_02324at 2427.766 kb on + strandat 2427.766 kb on + strandat 2427.773 kb on - strandat 2427.852 kb on + strandat 2427.881 kb on - strandat 2427.881 kb on - strandat 2427.893 kb on - strandat 2427.936 kb on + strandat 2427.936 kb on + strandat 2427.936 kb on + strandat 2427.936 kb on + strandat 2427.936 kb on + strandat 2427.937 kb on - strandat 2427.937 kb on - strandat 2427.937 kb on - strandat 2427.937 kb on - strandat 2427.937 kb on - strandat 2427.937 kb on - strandat 2427.937 kb on - strandat 2427.937 kb on - strandat 2427.937 kb on - strandat 2427.937 kb on - strandat 2427.942 kb on + strandat 2427.943 kb on - strandat 2428.045 kb on + strandat 2428.098 kb on - strandat 2428.224 kb on + strandat 2428.225 kb on - strandat 2428.304 kb on - strandat 2428.304 kb on - strandat 2428.389 kb on + strand, within OHPLBJKB_02325at 2428.413 kb on + strand, within OHPLBJKB_02325at 2428.479 kb on + strand, within OHPLBJKB_02325at 2428.479 kb on + strand, within OHPLBJKB_02325at 2428.480 kb on - strand, within OHPLBJKB_02325at 2428.504 kb on - strand, within OHPLBJKB_02325at 2428.588 kb on - strand, within OHPLBJKB_02325at 2428.588 kb on - strand, within OHPLBJKB_02325at 2428.657 kb on - strand, within OHPLBJKB_02325at 2428.674 kb on + strand, within OHPLBJKB_02325at 2428.674 kb on + strand, within OHPLBJKB_02325at 2428.675 kb on - strand, within OHPLBJKB_02325at 2428.675 kb on - strand, within OHPLBJKB_02325at 2428.675 kb on - strand, within OHPLBJKB_02325at 2428.785 kb on + strand, within OHPLBJKB_02325at 2428.786 kb on - strand, within OHPLBJKB_02325at 2428.788 kb on + strand, within OHPLBJKB_02325at 2428.788 kb on + strand, within OHPLBJKB_02325at 2428.789 kb on - strand, within OHPLBJKB_02325at 2428.833 kb on + strand, within OHPLBJKB_02325at 2428.833 kb on + strand, within OHPLBJKB_02325at 2428.833 kb on + strand, within OHPLBJKB_02325at 2428.834 kb on - strand, within OHPLBJKB_02325

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Per-strain Table

Position Strand Gene LocusTag Fraction mer MOI10
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2,424,924 + OHPLBJKB_02323 0.35 -0.9
2,424,924 + OHPLBJKB_02323 0.35 -0.2
2,424,925 - OHPLBJKB_02323 0.35 -0.2
2,424,950 - OHPLBJKB_02323 0.38 +0.5
2,424,950 - OHPLBJKB_02323 0.38 +1.0
2,424,973 - OHPLBJKB_02323 0.41 +0.6
2,425,094 + OHPLBJKB_02323 0.54 +0.3
2,425,095 - OHPLBJKB_02323 0.54 +0.2
2,425,104 - OHPLBJKB_02323 0.55 -1.7
2,425,173 + OHPLBJKB_02323 0.62 +0.7
2,425,245 - OHPLBJKB_02323 0.70 -0.6
2,425,292 + OHPLBJKB_02323 0.75 +0.1
2,425,293 - OHPLBJKB_02323 0.75 +0.4
2,425,293 - OHPLBJKB_02323 0.75 -0.5
2,425,293 - OHPLBJKB_02323 0.75 -0.1
2,425,374 + OHPLBJKB_02323 0.84 +1.0
2,425,389 + OHPLBJKB_02323 0.85 -1.5
2,425,389 + OHPLBJKB_02323 0.85 -0.5
2,425,390 - OHPLBJKB_02323 0.85 -0.2
2,425,390 - OHPLBJKB_02323 0.85 -0.1
2,425,390 - OHPLBJKB_02323 0.85 +0.5
2,425,558 + -0.3
2,425,559 - +0.1
2,425,562 + +0.2
2,425,804 + +1.5
2,425,929 - -0.3
2,426,055 + OHPLBJKB_02324 0.12 -0.2
2,426,055 + OHPLBJKB_02324 0.12 +0.7
2,426,055 + OHPLBJKB_02324 0.12 -0.7
2,426,055 + OHPLBJKB_02324 0.12 +0.6
2,426,056 - OHPLBJKB_02324 0.12 +0.6
2,426,128 + OHPLBJKB_02324 0.16 +0.8
2,426,128 + OHPLBJKB_02324 0.16 +0.1
2,426,129 - OHPLBJKB_02324 0.16 +0.1
2,426,137 - OHPLBJKB_02324 0.16 +0.6
2,426,137 - OHPLBJKB_02324 0.16 +0.3
2,426,236 + OHPLBJKB_02324 0.21 -0.0
2,426,237 - OHPLBJKB_02324 0.21 -0.6
2,426,267 + OHPLBJKB_02324 0.22 -0.6
2,426,267 + OHPLBJKB_02324 0.22 +0.6
2,426,280 - OHPLBJKB_02324 0.23 +0.2
2,426,433 - OHPLBJKB_02324 0.30 -0.0
2,426,433 - OHPLBJKB_02324 0.30 -0.7
2,426,544 - OHPLBJKB_02324 0.36 -0.9
2,426,912 - OHPLBJKB_02324 0.54 -0.0
2,426,944 + OHPLBJKB_02324 0.55 +0.2
2,426,944 + OHPLBJKB_02324 0.55 -0.2
2,426,944 + OHPLBJKB_02324 0.55 -0.9
2,426,945 - OHPLBJKB_02324 0.56 +0.8
2,426,945 - OHPLBJKB_02324 0.56 -0.1
2,426,949 + OHPLBJKB_02324 0.56 +0.7
2,426,950 - OHPLBJKB_02324 0.56 -0.1
2,426,950 - OHPLBJKB_02324 0.56 +0.6
2,427,140 + OHPLBJKB_02324 0.65 -0.5
2,427,141 - OHPLBJKB_02324 0.65 -0.3
2,427,220 + OHPLBJKB_02324 0.69 +1.1
2,427,221 - OHPLBJKB_02324 0.69 -0.4
2,427,260 - OHPLBJKB_02324 0.71 -0.5
2,427,268 + OHPLBJKB_02324 0.71 -1.0
2,427,285 + OHPLBJKB_02324 0.72 -0.4
2,427,285 + OHPLBJKB_02324 0.72 -0.3
2,427,286 - OHPLBJKB_02324 0.72 +0.3
2,427,286 - OHPLBJKB_02324 0.72 +0.8
2,427,304 + OHPLBJKB_02324 0.73 +1.4
2,427,304 + OHPLBJKB_02324 0.73 -0.6
2,427,312 - OHPLBJKB_02324 0.73 +0.1
2,427,377 + OHPLBJKB_02324 0.77 -1.5
2,427,378 - OHPLBJKB_02324 0.77 +0.0
2,427,396 + OHPLBJKB_02324 0.78 +1.0
2,427,462 - OHPLBJKB_02324 0.81 +0.1
2,427,499 - OHPLBJKB_02324 0.83 +0.7
2,427,506 + OHPLBJKB_02324 0.83 -0.7
2,427,506 + OHPLBJKB_02324 0.83 +0.4
2,427,506 + OHPLBJKB_02324 0.83 +0.9
2,427,506 + OHPLBJKB_02324 0.83 +0.5
2,427,506 + OHPLBJKB_02324 0.83 +0.6
2,427,507 - OHPLBJKB_02324 0.83 +0.5
2,427,507 - OHPLBJKB_02324 0.83 +0.5
2,427,507 - OHPLBJKB_02324 0.83 +1.0
2,427,507 - OHPLBJKB_02324 0.83 -2.4
2,427,561 + OHPLBJKB_02324 0.86 -0.1
2,427,624 - OHPLBJKB_02324 0.89 +0.2
2,427,627 + OHPLBJKB_02324 0.89 -0.2
2,427,628 - OHPLBJKB_02324 0.89 +0.1
2,427,628 - OHPLBJKB_02324 0.89 +0.8
2,427,628 - OHPLBJKB_02324 0.89 +0.1
2,427,628 - OHPLBJKB_02324 0.89 -0.3
2,427,766 + +0.7
2,427,766 + -1.3
2,427,773 - +1.3
2,427,852 + -0.0
2,427,881 - -0.1
2,427,881 - -0.1
2,427,893 - -0.9
2,427,936 + -0.8
2,427,936 + -0.1
2,427,936 + -0.3
2,427,936 + -0.1
2,427,936 + -1.7
2,427,937 - +0.2
2,427,937 - +1.2
2,427,937 - -0.3
2,427,937 - +0.5
2,427,937 - +0.1
2,427,937 - -0.5
2,427,937 - +0.1
2,427,937 - -0.2
2,427,937 - +0.1
2,427,937 - +0.3
2,427,942 + -0.2
2,427,943 - +0.6
2,428,045 + -1.1
2,428,098 - -0.1
2,428,224 + -0.9
2,428,225 - +0.4
2,428,304 - -1.1
2,428,304 - -0.7
2,428,389 + OHPLBJKB_02325 0.13 -0.7
2,428,413 + OHPLBJKB_02325 0.14 -0.4
2,428,479 + OHPLBJKB_02325 0.17 -0.3
2,428,479 + OHPLBJKB_02325 0.17 +0.3
2,428,480 - OHPLBJKB_02325 0.17 +0.4
2,428,504 - OHPLBJKB_02325 0.18 -0.4
2,428,588 - OHPLBJKB_02325 0.21 -1.5
2,428,588 - OHPLBJKB_02325 0.21 -0.2
2,428,657 - OHPLBJKB_02325 0.24 -0.7
2,428,674 + OHPLBJKB_02325 0.25 +0.2
2,428,674 + OHPLBJKB_02325 0.25 +1.5
2,428,675 - OHPLBJKB_02325 0.25 +1.1
2,428,675 - OHPLBJKB_02325 0.25 +0.3
2,428,675 - OHPLBJKB_02325 0.25 +0.7
2,428,785 + OHPLBJKB_02325 0.30 +0.3
2,428,786 - OHPLBJKB_02325 0.30 -0.9
2,428,788 + OHPLBJKB_02325 0.30 +0.3
2,428,788 + OHPLBJKB_02325 0.30 -0.3
2,428,789 - OHPLBJKB_02325 0.30 -0.2
2,428,833 + OHPLBJKB_02325 0.32 +0.7
2,428,833 + OHPLBJKB_02325 0.32 +1.6
2,428,833 + OHPLBJKB_02325 0.32 -1.9
2,428,834 - OHPLBJKB_02325 0.32 +1.3

Or see this region's nucleotide sequence