Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01755

Experiment: mer MOI10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_01754 and OHPLBJKB_01755 are separated by 901 nucleotidesOHPLBJKB_01755 and OHPLBJKB_01756 are separated by 342 nucleotides OHPLBJKB_01754: OHPLBJKB_01754 - hypothetical protein, at 1,847,355 to 1,847,726 _01754 OHPLBJKB_01755: OHPLBJKB_01755 - Cytochrome b561, at 1,848,628 to 1,849,158 _01755 OHPLBJKB_01756: OHPLBJKB_01756 - Metal-binding protein ZinT, at 1,849,501 to 1,850,172 _01756 Position (kb) 1848 1849 1850Strain fitness (log2 ratio) -2 -1 0 1at 1847.654 kb on + strand, within OHPLBJKB_01754at 1847.654 kb on + strand, within OHPLBJKB_01754at 1847.655 kb on - strand, within OHPLBJKB_01754at 1847.723 kb on - strandat 1847.774 kb on + strandat 1847.962 kb on + strandat 1847.968 kb on + strandat 1847.969 kb on - strandat 1847.969 kb on - strandat 1847.973 kb on - strandat 1848.123 kb on - strandat 1848.161 kb on + strandat 1848.218 kb on + strandat 1848.218 kb on + strandat 1848.218 kb on + strandat 1848.219 kb on - strandat 1848.370 kb on - strandat 1848.660 kb on + strandat 1848.660 kb on + strandat 1848.663 kb on + strandat 1848.722 kb on + strand, within OHPLBJKB_01755at 1848.729 kb on + strand, within OHPLBJKB_01755at 1848.836 kb on + strand, within OHPLBJKB_01755at 1848.836 kb on + strand, within OHPLBJKB_01755at 1848.880 kb on + strand, within OHPLBJKB_01755at 1848.881 kb on - strand, within OHPLBJKB_01755at 1848.882 kb on + strand, within OHPLBJKB_01755at 1848.882 kb on + strand, within OHPLBJKB_01755at 1848.882 kb on + strand, within OHPLBJKB_01755at 1848.882 kb on + strand, within OHPLBJKB_01755at 1848.882 kb on + strand, within OHPLBJKB_01755at 1848.883 kb on - strand, within OHPLBJKB_01755at 1848.884 kb on + strand, within OHPLBJKB_01755at 1848.884 kb on + strand, within OHPLBJKB_01755at 1848.885 kb on - strand, within OHPLBJKB_01755at 1848.885 kb on - strand, within OHPLBJKB_01755at 1848.945 kb on + strand, within OHPLBJKB_01755at 1848.946 kb on - strand, within OHPLBJKB_01755at 1848.970 kb on + strand, within OHPLBJKB_01755at 1849.019 kb on + strand, within OHPLBJKB_01755at 1849.019 kb on + strand, within OHPLBJKB_01755at 1849.020 kb on - strand, within OHPLBJKB_01755at 1849.020 kb on - strand, within OHPLBJKB_01755at 1849.020 kb on - strand, within OHPLBJKB_01755at 1849.020 kb on - strand, within OHPLBJKB_01755at 1849.043 kb on + strand, within OHPLBJKB_01755at 1849.043 kb on + strand, within OHPLBJKB_01755at 1849.047 kb on + strand, within OHPLBJKB_01755at 1849.048 kb on - strand, within OHPLBJKB_01755at 1849.048 kb on - strand, within OHPLBJKB_01755at 1849.050 kb on + strand, within OHPLBJKB_01755at 1849.054 kb on - strand, within OHPLBJKB_01755at 1849.130 kb on + strandat 1849.306 kb on - strandat 1849.366 kb on - strandat 1849.377 kb on - strandat 1849.377 kb on - strandat 1849.377 kb on - strandat 1849.414 kb on - strandat 1849.414 kb on - strandat 1849.455 kb on + strandat 1849.469 kb on - strandat 1849.556 kb on + strandat 1849.556 kb on + strandat 1849.557 kb on - strandat 1849.840 kb on - strand, within OHPLBJKB_01756at 1849.865 kb on + strand, within OHPLBJKB_01756at 1850.054 kb on - strand, within OHPLBJKB_01756at 1850.106 kb on + strandat 1850.116 kb on + strandat 1850.117 kb on - strandat 1850.117 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction mer MOI10
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1,847,654 + OHPLBJKB_01754 0.80 -1.1
1,847,654 + OHPLBJKB_01754 0.80 +0.9
1,847,655 - OHPLBJKB_01754 0.81 -1.0
1,847,723 - +0.2
1,847,774 + -0.2
1,847,962 + -0.3
1,847,968 + +0.4
1,847,969 - +0.8
1,847,969 - -0.4
1,847,973 - -0.2
1,848,123 - +0.0
1,848,161 + +0.5
1,848,218 + +0.2
1,848,218 + +0.3
1,848,218 + +0.2
1,848,219 - +0.3
1,848,370 - +0.4
1,848,660 + -0.2
1,848,660 + -0.8
1,848,663 + +0.5
1,848,722 + OHPLBJKB_01755 0.18 +0.3
1,848,729 + OHPLBJKB_01755 0.19 -0.4
1,848,836 + OHPLBJKB_01755 0.39 -0.1
1,848,836 + OHPLBJKB_01755 0.39 -0.5
1,848,880 + OHPLBJKB_01755 0.47 +0.7
1,848,881 - OHPLBJKB_01755 0.48 +0.8
1,848,882 + OHPLBJKB_01755 0.48 +0.2
1,848,882 + OHPLBJKB_01755 0.48 -0.1
1,848,882 + OHPLBJKB_01755 0.48 -0.2
1,848,882 + OHPLBJKB_01755 0.48 -0.6
1,848,882 + OHPLBJKB_01755 0.48 -0.9
1,848,883 - OHPLBJKB_01755 0.48 +1.0
1,848,884 + OHPLBJKB_01755 0.48 -0.4
1,848,884 + OHPLBJKB_01755 0.48 -0.2
1,848,885 - OHPLBJKB_01755 0.48 -0.4
1,848,885 - OHPLBJKB_01755 0.48 +0.1
1,848,945 + OHPLBJKB_01755 0.60 +0.7
1,848,946 - OHPLBJKB_01755 0.60 -1.5
1,848,970 + OHPLBJKB_01755 0.64 -0.6
1,849,019 + OHPLBJKB_01755 0.74 -0.5
1,849,019 + OHPLBJKB_01755 0.74 -0.5
1,849,020 - OHPLBJKB_01755 0.74 +1.7
1,849,020 - OHPLBJKB_01755 0.74 -0.7
1,849,020 - OHPLBJKB_01755 0.74 +0.9
1,849,020 - OHPLBJKB_01755 0.74 -0.2
1,849,043 + OHPLBJKB_01755 0.78 -0.2
1,849,043 + OHPLBJKB_01755 0.78 +0.1
1,849,047 + OHPLBJKB_01755 0.79 -0.4
1,849,048 - OHPLBJKB_01755 0.79 +0.0
1,849,048 - OHPLBJKB_01755 0.79 -0.0
1,849,050 + OHPLBJKB_01755 0.79 -0.2
1,849,054 - OHPLBJKB_01755 0.80 -1.2
1,849,130 + +0.2
1,849,306 - -0.5
1,849,366 - -1.2
1,849,377 - -0.5
1,849,377 - -0.9
1,849,377 - +0.2
1,849,414 - -0.3
1,849,414 - +0.3
1,849,455 + -0.2
1,849,469 - +0.1
1,849,556 + -1.1
1,849,556 + -0.1
1,849,557 - +0.9
1,849,840 - OHPLBJKB_01756 0.50 -1.3
1,849,865 + OHPLBJKB_01756 0.54 -1.8
1,850,054 - OHPLBJKB_01756 0.82 -0.4
1,850,106 + -0.4
1,850,116 + +0.8
1,850,117 - +0.2
1,850,117 - -0.8

Or see this region's nucleotide sequence