Experiment: mer MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01754 and OHPLBJKB_01755 are separated by 901 nucleotides OHPLBJKB_01755 and OHPLBJKB_01756 are separated by 342 nucleotides
OHPLBJKB_01754: OHPLBJKB_01754 - hypothetical protein, at 1,847,355 to 1,847,726
_01754
OHPLBJKB_01755: OHPLBJKB_01755 - Cytochrome b561, at 1,848,628 to 1,849,158
_01755
OHPLBJKB_01756: OHPLBJKB_01756 - Metal-binding protein ZinT, at 1,849,501 to 1,850,172
_01756
Position (kb)
1848
1849
1850 Strain fitness (log2 ratio)
-2
-1
0
1 at 1847.654 kb on + strand, within OHPLBJKB_01754 at 1847.654 kb on + strand, within OHPLBJKB_01754 at 1847.655 kb on - strand, within OHPLBJKB_01754 at 1847.723 kb on - strand at 1847.774 kb on + strand at 1847.962 kb on + strand at 1847.968 kb on + strand at 1847.969 kb on - strand at 1847.969 kb on - strand at 1847.973 kb on - strand at 1848.123 kb on - strand at 1848.161 kb on + strand at 1848.218 kb on + strand at 1848.218 kb on + strand at 1848.218 kb on + strand at 1848.219 kb on - strand at 1848.370 kb on - strand at 1848.660 kb on + strand at 1848.660 kb on + strand at 1848.663 kb on + strand at 1848.722 kb on + strand, within OHPLBJKB_01755 at 1848.729 kb on + strand, within OHPLBJKB_01755 at 1848.836 kb on + strand, within OHPLBJKB_01755 at 1848.836 kb on + strand, within OHPLBJKB_01755 at 1848.880 kb on + strand, within OHPLBJKB_01755 at 1848.881 kb on - strand, within OHPLBJKB_01755 at 1848.882 kb on + strand, within OHPLBJKB_01755 at 1848.882 kb on + strand, within OHPLBJKB_01755 at 1848.882 kb on + strand, within OHPLBJKB_01755 at 1848.882 kb on + strand, within OHPLBJKB_01755 at 1848.882 kb on + strand, within OHPLBJKB_01755 at 1848.883 kb on - strand, within OHPLBJKB_01755 at 1848.884 kb on + strand, within OHPLBJKB_01755 at 1848.884 kb on + strand, within OHPLBJKB_01755 at 1848.885 kb on - strand, within OHPLBJKB_01755 at 1848.885 kb on - strand, within OHPLBJKB_01755 at 1848.945 kb on + strand, within OHPLBJKB_01755 at 1848.946 kb on - strand, within OHPLBJKB_01755 at 1848.970 kb on + strand, within OHPLBJKB_01755 at 1849.019 kb on + strand, within OHPLBJKB_01755 at 1849.019 kb on + strand, within OHPLBJKB_01755 at 1849.020 kb on - strand, within OHPLBJKB_01755 at 1849.020 kb on - strand, within OHPLBJKB_01755 at 1849.020 kb on - strand, within OHPLBJKB_01755 at 1849.020 kb on - strand, within OHPLBJKB_01755 at 1849.043 kb on + strand, within OHPLBJKB_01755 at 1849.043 kb on + strand, within OHPLBJKB_01755 at 1849.047 kb on + strand, within OHPLBJKB_01755 at 1849.048 kb on - strand, within OHPLBJKB_01755 at 1849.048 kb on - strand, within OHPLBJKB_01755 at 1849.050 kb on + strand, within OHPLBJKB_01755 at 1849.054 kb on - strand, within OHPLBJKB_01755 at 1849.130 kb on + strand at 1849.306 kb on - strand at 1849.366 kb on - strand at 1849.377 kb on - strand at 1849.377 kb on - strand at 1849.377 kb on - strand at 1849.414 kb on - strand at 1849.414 kb on - strand at 1849.455 kb on + strand at 1849.469 kb on - strand at 1849.556 kb on + strand at 1849.556 kb on + strand at 1849.557 kb on - strand at 1849.840 kb on - strand, within OHPLBJKB_01756 at 1849.865 kb on + strand, within OHPLBJKB_01756 at 1850.054 kb on - strand, within OHPLBJKB_01756 at 1850.106 kb on + strand at 1850.116 kb on + strand at 1850.117 kb on - strand at 1850.117 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction mer MOI10 remove 1,847,654 + OHPLBJKB_01754 0.80 -1.1 1,847,654 + OHPLBJKB_01754 0.80 +0.9 1,847,655 - OHPLBJKB_01754 0.81 -1.0 1,847,723 - +0.2 1,847,774 + -0.2 1,847,962 + -0.3 1,847,968 + +0.4 1,847,969 - +0.8 1,847,969 - -0.4 1,847,973 - -0.2 1,848,123 - +0.0 1,848,161 + +0.5 1,848,218 + +0.2 1,848,218 + +0.3 1,848,218 + +0.2 1,848,219 - +0.3 1,848,370 - +0.4 1,848,660 + -0.2 1,848,660 + -0.8 1,848,663 + +0.5 1,848,722 + OHPLBJKB_01755 0.18 +0.3 1,848,729 + OHPLBJKB_01755 0.19 -0.4 1,848,836 + OHPLBJKB_01755 0.39 -0.1 1,848,836 + OHPLBJKB_01755 0.39 -0.5 1,848,880 + OHPLBJKB_01755 0.47 +0.7 1,848,881 - OHPLBJKB_01755 0.48 +0.8 1,848,882 + OHPLBJKB_01755 0.48 +0.2 1,848,882 + OHPLBJKB_01755 0.48 -0.1 1,848,882 + OHPLBJKB_01755 0.48 -0.2 1,848,882 + OHPLBJKB_01755 0.48 -0.6 1,848,882 + OHPLBJKB_01755 0.48 -0.9 1,848,883 - OHPLBJKB_01755 0.48 +1.0 1,848,884 + OHPLBJKB_01755 0.48 -0.4 1,848,884 + OHPLBJKB_01755 0.48 -0.2 1,848,885 - OHPLBJKB_01755 0.48 -0.4 1,848,885 - OHPLBJKB_01755 0.48 +0.1 1,848,945 + OHPLBJKB_01755 0.60 +0.7 1,848,946 - OHPLBJKB_01755 0.60 -1.5 1,848,970 + OHPLBJKB_01755 0.64 -0.6 1,849,019 + OHPLBJKB_01755 0.74 -0.5 1,849,019 + OHPLBJKB_01755 0.74 -0.5 1,849,020 - OHPLBJKB_01755 0.74 +1.7 1,849,020 - OHPLBJKB_01755 0.74 -0.7 1,849,020 - OHPLBJKB_01755 0.74 +0.9 1,849,020 - OHPLBJKB_01755 0.74 -0.2 1,849,043 + OHPLBJKB_01755 0.78 -0.2 1,849,043 + OHPLBJKB_01755 0.78 +0.1 1,849,047 + OHPLBJKB_01755 0.79 -0.4 1,849,048 - OHPLBJKB_01755 0.79 +0.0 1,849,048 - OHPLBJKB_01755 0.79 -0.0 1,849,050 + OHPLBJKB_01755 0.79 -0.2 1,849,054 - OHPLBJKB_01755 0.80 -1.2 1,849,130 + +0.2 1,849,306 - -0.5 1,849,366 - -1.2 1,849,377 - -0.5 1,849,377 - -0.9 1,849,377 - +0.2 1,849,414 - -0.3 1,849,414 - +0.3 1,849,455 + -0.2 1,849,469 - +0.1 1,849,556 + -1.1 1,849,556 + -0.1 1,849,557 - +0.9 1,849,840 - OHPLBJKB_01756 0.50 -1.3 1,849,865 + OHPLBJKB_01756 0.54 -1.8 1,850,054 - OHPLBJKB_01756 0.82 -0.4 1,850,106 + -0.4 1,850,116 + +0.8 1,850,117 - +0.2 1,850,117 - -0.8
Or see this region's nucleotide sequence