Experiment: mer MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00934 and OHPLBJKB_00935 are separated by 57 nucleotides OHPLBJKB_00935 and OHPLBJKB_00936 are separated by 556 nucleotides
OHPLBJKB_00934: OHPLBJKB_00934 - L-serine dehydratase 2, at 961,749 to 963,116
_00934
OHPLBJKB_00935: OHPLBJKB_00935 - Serine transporter, at 963,174 to 964,463
_00935
OHPLBJKB_00936: OHPLBJKB_00936 - 'Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase' transl_table=11, at 965,020 to 966,384
_00936
Position (kb) 963
964
965 Strain fitness (log2 ratio) -2
-1
0
1
2 at 962.218 kb on + strand, within OHPLBJKB_00934 at 962.222 kb on - strand, within OHPLBJKB_00934 at 962.222 kb on - strand, within OHPLBJKB_00934 at 962.481 kb on + strand, within OHPLBJKB_00934 at 962.482 kb on - strand, within OHPLBJKB_00934 at 962.482 kb on - strand, within OHPLBJKB_00934 at 962.605 kb on + strand, within OHPLBJKB_00934 at 962.634 kb on - strand, within OHPLBJKB_00934 at 962.681 kb on + strand, within OHPLBJKB_00934 at 962.682 kb on - strand, within OHPLBJKB_00934 at 962.686 kb on + strand, within OHPLBJKB_00934 at 962.686 kb on + strand, within OHPLBJKB_00934 at 962.687 kb on - strand, within OHPLBJKB_00934 at 962.687 kb on - strand, within OHPLBJKB_00934 at 962.687 kb on - strand, within OHPLBJKB_00934 at 962.687 kb on - strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.690 kb on - strand, within OHPLBJKB_00934 at 962.690 kb on - strand, within OHPLBJKB_00934 at 962.690 kb on - strand, within OHPLBJKB_00934 at 962.690 kb on - strand, within OHPLBJKB_00934 at 962.690 kb on - strand, within OHPLBJKB_00934 at 962.690 kb on - strand, within OHPLBJKB_00934 at 962.690 kb on - strand, within OHPLBJKB_00934 at 962.701 kb on + strand, within OHPLBJKB_00934 at 962.844 kb on - strand, within OHPLBJKB_00934 at 962.859 kb on - strand, within OHPLBJKB_00934 at 962.918 kb on + strand, within OHPLBJKB_00934 at 962.919 kb on - strand, within OHPLBJKB_00934 at 962.919 kb on - strand, within OHPLBJKB_00934 at 962.919 kb on - strand, within OHPLBJKB_00934 at 962.999 kb on + strand at 963.000 kb on - strand at 963.009 kb on - strand at 963.124 kb on - strand at 963.124 kb on - strand at 963.124 kb on - strand at 963.176 kb on - strand at 963.176 kb on - strand at 963.190 kb on + strand at 963.191 kb on - strand at 963.191 kb on - strand at 963.235 kb on - strand at 963.235 kb on - strand at 963.235 kb on - strand at 963.235 kb on - strand at 963.235 kb on - strand at 963.235 kb on - strand at 963.235 kb on - strand at 963.257 kb on - strand at 963.260 kb on + strand at 963.261 kb on - strand at 963.261 kb on - strand at 963.261 kb on - strand at 963.261 kb on - strand at 963.289 kb on + strand at 963.290 kb on - strand at 963.290 kb on - strand at 963.290 kb on - strand at 963.443 kb on + strand, within OHPLBJKB_00935 at 963.443 kb on + strand, within OHPLBJKB_00935 at 963.443 kb on + strand, within OHPLBJKB_00935 at 963.444 kb on - strand, within OHPLBJKB_00935 at 963.444 kb on - strand, within OHPLBJKB_00935 at 963.444 kb on - strand, within OHPLBJKB_00935 at 963.444 kb on - strand, within OHPLBJKB_00935 at 963.464 kb on + strand, within OHPLBJKB_00935 at 963.464 kb on + strand, within OHPLBJKB_00935 at 963.502 kb on + strand, within OHPLBJKB_00935 at 963.749 kb on - strand, within OHPLBJKB_00935 at 963.919 kb on + strand, within OHPLBJKB_00935 at 963.919 kb on + strand, within OHPLBJKB_00935 at 963.919 kb on + strand, within OHPLBJKB_00935 at 963.940 kb on - strand, within OHPLBJKB_00935 at 963.940 kb on - strand, within OHPLBJKB_00935 at 963.958 kb on - strand, within OHPLBJKB_00935 at 963.965 kb on + strand, within OHPLBJKB_00935 at 963.966 kb on - strand, within OHPLBJKB_00935 at 963.966 kb on - strand, within OHPLBJKB_00935 at 964.065 kb on - strand, within OHPLBJKB_00935 at 964.065 kb on - strand, within OHPLBJKB_00935 at 964.065 kb on - strand, within OHPLBJKB_00935 at 964.098 kb on - strand, within OHPLBJKB_00935 at 964.111 kb on - strand, within OHPLBJKB_00935 at 964.115 kb on + strand, within OHPLBJKB_00935 at 964.115 kb on + strand, within OHPLBJKB_00935 at 964.115 kb on + strand, within OHPLBJKB_00935 at 964.116 kb on - strand, within OHPLBJKB_00935 at 964.116 kb on - strand, within OHPLBJKB_00935 at 964.140 kb on - strand, within OHPLBJKB_00935 at 964.140 kb on - strand, within OHPLBJKB_00935 at 964.150 kb on + strand, within OHPLBJKB_00935 at 964.150 kb on + strand, within OHPLBJKB_00935 at 964.151 kb on - strand, within OHPLBJKB_00935 at 964.161 kb on - strand, within OHPLBJKB_00935 at 964.161 kb on - strand, within OHPLBJKB_00935 at 964.169 kb on + strand, within OHPLBJKB_00935 at 964.198 kb on - strand, within OHPLBJKB_00935 at 964.240 kb on - strand, within OHPLBJKB_00935 at 964.293 kb on - strand, within OHPLBJKB_00935 at 964.419 kb on - strand at 964.465 kb on + strand at 964.466 kb on - strand at 964.466 kb on - strand at 964.466 kb on - strand at 964.466 kb on - strand at 964.489 kb on - strand at 964.489 kb on - strand at 964.489 kb on - strand at 964.489 kb on - strand at 964.564 kb on - strand at 964.571 kb on + strand at 964.582 kb on + strand at 964.612 kb on + strand at 964.613 kb on - strand at 964.613 kb on - strand at 964.617 kb on - strand at 964.617 kb on - strand at 964.617 kb on - strand at 964.620 kb on + strand at 964.620 kb on + strand at 964.643 kb on - strand at 964.647 kb on + strand at 964.721 kb on - strand at 964.765 kb on - strand at 964.766 kb on + strand at 964.766 kb on + strand at 964.907 kb on + strand at 964.940 kb on + strand at 964.942 kb on + strand at 964.942 kb on + strand at 964.966 kb on + strand at 964.966 kb on + strand at 964.966 kb on + strand at 964.966 kb on + strand at 964.966 kb on + strand at 964.966 kb on + strand at 964.967 kb on - strand at 964.967 kb on - strand at 964.967 kb on - strand at 964.967 kb on - strand at 965.021 kb on + strand at 965.022 kb on - strand at 965.022 kb on - strand at 965.022 kb on - strand at 965.037 kb on - strand at 965.049 kb on - strand at 965.049 kb on - strand at 965.049 kb on - strand at 965.070 kb on + strand at 965.071 kb on - strand at 965.071 kb on - strand at 965.095 kb on + strand at 965.095 kb on + strand at 965.096 kb on - strand at 965.109 kb on + strand at 965.109 kb on + strand at 965.109 kb on + strand at 965.109 kb on + strand at 965.118 kb on + strand at 965.119 kb on - strand at 965.185 kb on + strand, within OHPLBJKB_00936 at 965.185 kb on + strand, within OHPLBJKB_00936 at 965.185 kb on + strand, within OHPLBJKB_00936 at 965.185 kb on + strand, within OHPLBJKB_00936 at 965.186 kb on - strand, within OHPLBJKB_00936 at 965.186 kb on - strand, within OHPLBJKB_00936 at 965.278 kb on - strand, within OHPLBJKB_00936 at 965.337 kb on + strand, within OHPLBJKB_00936 at 965.337 kb on + strand, within OHPLBJKB_00936 at 965.337 kb on + strand, within OHPLBJKB_00936 at 965.338 kb on - strand, within OHPLBJKB_00936 at 965.338 kb on - strand, within OHPLBJKB_00936
Per-strain Table
Position Strand Gene LocusTag Fraction mer MOI10 remove 962,218 + OHPLBJKB_00934 0.34 +0.2 962,222 - OHPLBJKB_00934 0.35 +0.8 962,222 - OHPLBJKB_00934 0.35 +0.4 962,481 + OHPLBJKB_00934 0.54 -1.9 962,482 - OHPLBJKB_00934 0.54 +0.4 962,482 - OHPLBJKB_00934 0.54 +0.2 962,605 + OHPLBJKB_00934 0.63 -1.1 962,634 - OHPLBJKB_00934 0.65 -0.3 962,681 + OHPLBJKB_00934 0.68 +0.0 962,682 - OHPLBJKB_00934 0.68 -0.9 962,686 + OHPLBJKB_00934 0.68 +0.0 962,686 + OHPLBJKB_00934 0.68 -1.5 962,687 - OHPLBJKB_00934 0.69 -0.2 962,687 - OHPLBJKB_00934 0.69 -0.3 962,687 - OHPLBJKB_00934 0.69 -0.3 962,687 - OHPLBJKB_00934 0.69 -1.0 962,689 + OHPLBJKB_00934 0.69 +0.9 962,689 + OHPLBJKB_00934 0.69 -0.2 962,689 + OHPLBJKB_00934 0.69 +1.0 962,689 + OHPLBJKB_00934 0.69 -0.2 962,689 + OHPLBJKB_00934 0.69 +0.3 962,689 + OHPLBJKB_00934 0.69 -2.4 962,689 + OHPLBJKB_00934 0.69 -0.7 962,689 + OHPLBJKB_00934 0.69 +0.4 962,689 + OHPLBJKB_00934 0.69 +0.4 962,690 - OHPLBJKB_00934 0.69 -1.0 962,690 - OHPLBJKB_00934 0.69 +0.1 962,690 - OHPLBJKB_00934 0.69 +0.0 962,690 - OHPLBJKB_00934 0.69 +0.5 962,690 - OHPLBJKB_00934 0.69 +0.0 962,690 - OHPLBJKB_00934 0.69 -0.6 962,690 - OHPLBJKB_00934 0.69 +0.3 962,701 + OHPLBJKB_00934 0.70 -0.4 962,844 - OHPLBJKB_00934 0.80 +0.1 962,859 - OHPLBJKB_00934 0.81 -0.4 962,918 + OHPLBJKB_00934 0.85 -1.9 962,919 - OHPLBJKB_00934 0.86 -0.1 962,919 - OHPLBJKB_00934 0.86 +0.0 962,919 - OHPLBJKB_00934 0.86 +0.7 962,999 + -0.2 963,000 - -0.1 963,009 - +0.4 963,124 - -0.6 963,124 - -0.1 963,124 - +0.0 963,176 - +0.2 963,176 - +0.1 963,190 + +0.6 963,191 - +0.5 963,191 - +0.2 963,235 - -0.2 963,235 - +0.8 963,235 - +0.3 963,235 - -0.7 963,235 - -0.1 963,235 - +0.3 963,235 - -0.8 963,257 - -0.3 963,260 + -0.7 963,261 - -0.3 963,261 - -0.2 963,261 - +1.0 963,261 - -0.3 963,289 + -1.7 963,290 - -1.2 963,290 - -0.9 963,290 - -0.0 963,443 + OHPLBJKB_00935 0.21 +0.6 963,443 + OHPLBJKB_00935 0.21 +0.0 963,443 + OHPLBJKB_00935 0.21 -1.2 963,444 - OHPLBJKB_00935 0.21 +0.0 963,444 - OHPLBJKB_00935 0.21 -0.9 963,444 - OHPLBJKB_00935 0.21 -0.8 963,444 - OHPLBJKB_00935 0.21 -0.4 963,464 + OHPLBJKB_00935 0.22 -1.0 963,464 + OHPLBJKB_00935 0.22 +0.6 963,502 + OHPLBJKB_00935 0.25 -1.8 963,749 - OHPLBJKB_00935 0.45 -0.2 963,919 + OHPLBJKB_00935 0.58 -1.2 963,919 + OHPLBJKB_00935 0.58 -2.0 963,919 + OHPLBJKB_00935 0.58 -0.4 963,940 - OHPLBJKB_00935 0.59 -0.1 963,940 - OHPLBJKB_00935 0.59 -0.8 963,958 - OHPLBJKB_00935 0.61 +0.9 963,965 + OHPLBJKB_00935 0.61 +0.9 963,966 - OHPLBJKB_00935 0.61 -1.0 963,966 - OHPLBJKB_00935 0.61 +0.3 964,065 - OHPLBJKB_00935 0.69 -0.2 964,065 - OHPLBJKB_00935 0.69 -0.2 964,065 - OHPLBJKB_00935 0.69 +0.6 964,098 - OHPLBJKB_00935 0.72 -0.6 964,111 - OHPLBJKB_00935 0.73 -0.1 964,115 + OHPLBJKB_00935 0.73 +1.0 964,115 + OHPLBJKB_00935 0.73 -0.5 964,115 + OHPLBJKB_00935 0.73 -0.5 964,116 - OHPLBJKB_00935 0.73 -1.7 964,116 - OHPLBJKB_00935 0.73 -1.1 964,140 - OHPLBJKB_00935 0.75 -0.2 964,140 - OHPLBJKB_00935 0.75 -1.6 964,150 + OHPLBJKB_00935 0.76 -0.1 964,150 + OHPLBJKB_00935 0.76 -1.2 964,151 - OHPLBJKB_00935 0.76 +1.3 964,161 - OHPLBJKB_00935 0.77 -0.7 964,161 - OHPLBJKB_00935 0.77 -0.6 964,169 + OHPLBJKB_00935 0.77 +1.3 964,198 - OHPLBJKB_00935 0.79 +0.1 964,240 - OHPLBJKB_00935 0.83 -1.3 964,293 - OHPLBJKB_00935 0.87 -0.4 964,419 - -0.9 964,465 + +0.4 964,466 - +0.2 964,466 - -0.1 964,466 - -1.3 964,466 - +0.6 964,489 - +0.6 964,489 - +0.2 964,489 - +0.4 964,489 - -0.1 964,564 - +0.4 964,571 + -0.5 964,582 + +0.3 964,612 + -0.8 964,613 - -1.8 964,613 - +1.3 964,617 - -0.1 964,617 - +0.4 964,617 - -0.8 964,620 + -0.2 964,620 + -0.4 964,643 - +0.6 964,647 + +0.2 964,721 - +1.0 964,765 - +1.4 964,766 + +0.7 964,766 + +0.6 964,907 + +0.8 964,940 + +2.0 964,942 + +0.9 964,942 + +0.1 964,966 + +0.7 964,966 + -0.4 964,966 + -2.0 964,966 + -0.5 964,966 + +0.3 964,966 + -0.6 964,967 - +0.5 964,967 - +0.4 964,967 - +0.2 964,967 - +0.0 965,021 + +0.4 965,022 - +0.4 965,022 - -0.4 965,022 - +0.5 965,037 - -0.7 965,049 - +0.4 965,049 - +0.3 965,049 - +0.4 965,070 + +0.3 965,071 - +0.4 965,071 - +0.0 965,095 + +0.6 965,095 + -1.5 965,096 - -1.6 965,109 + -0.1 965,109 + -0.2 965,109 + +0.0 965,109 + -0.1 965,118 + -0.9 965,119 - +0.4 965,185 + OHPLBJKB_00936 0.12 -0.2 965,185 + OHPLBJKB_00936 0.12 +0.4 965,185 + OHPLBJKB_00936 0.12 -0.0 965,185 + OHPLBJKB_00936 0.12 -0.0 965,186 - OHPLBJKB_00936 0.12 -1.2 965,186 - OHPLBJKB_00936 0.12 +0.4 965,278 - OHPLBJKB_00936 0.19 -1.0 965,337 + OHPLBJKB_00936 0.23 -0.1 965,337 + OHPLBJKB_00936 0.23 -0.2 965,337 + OHPLBJKB_00936 0.23 -0.7 965,338 - OHPLBJKB_00936 0.23 -0.5 965,338 - OHPLBJKB_00936 0.23 -1.1
Or see this region's nucleotide sequence