Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03121 and MPMX26_03122 are separated by 351 nucleotides MPMX26_03122 and MPMX26_03123 are separated by 64 nucleotides MPMX26_03123 and MPMX26_03124 are separated by 469 nucleotides
MPMX26_03121: MPMX26_03121 - hypothetical protein, at 34,658 to 34,900
_03121
MPMX26_03122: MPMX26_03122 - Protein YobA, at 35,252 to 35,632
_03122
MPMX26_03123: MPMX26_03123 - hypothetical protein, at 35,697 to 36,578
_03123
MPMX26_03124: MPMX26_03124 - hypothetical protein, at 37,048 to 37,242
_03124
Position (kb) 35
36
37 Strain fitness (log2 ratio) -1
0
1 at 34.720 kb on - strand, within MPMX26_03121 at 34.727 kb on - strand, within MPMX26_03121 at 34.727 kb on - strand, within MPMX26_03121 at 34.727 kb on - strand, within MPMX26_03121 at 34.727 kb on - strand, within MPMX26_03121 at 34.812 kb on - strand, within MPMX26_03121 at 34.859 kb on - strand, within MPMX26_03121 at 35.220 kb on + strand at 35.284 kb on + strand at 35.339 kb on + strand, within MPMX26_03122 at 35.339 kb on + strand, within MPMX26_03122 at 35.418 kb on + strand, within MPMX26_03122 at 35.550 kb on + strand, within MPMX26_03122 at 35.562 kb on + strand, within MPMX26_03122 at 35.656 kb on - strand at 36.044 kb on + strand, within MPMX26_03123 at 37.071 kb on + strand, within MPMX26_03124 at 37.188 kb on + strand, within MPMX26_03124 at 37.205 kb on + strand, within MPMX26_03124 at 37.207 kb on + strand, within MPMX26_03124 at 37.231 kb on + strand at 37.495 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 34,720 - MPMX26_03121 0.26 -0.4 34,727 - MPMX26_03121 0.28 +0.7 34,727 - MPMX26_03121 0.28 -0.5 34,727 - MPMX26_03121 0.28 -0.5 34,727 - MPMX26_03121 0.28 +0.7 34,812 - MPMX26_03121 0.63 +0.8 34,859 - MPMX26_03121 0.83 +0.1 35,220 + +0.5 35,284 + +1.1 35,339 + MPMX26_03122 0.23 +0.5 35,339 + MPMX26_03122 0.23 -0.7 35,418 + MPMX26_03122 0.44 -0.1 35,550 + MPMX26_03122 0.78 +1.2 35,562 + MPMX26_03122 0.81 +0.9 35,656 - +0.9 36,044 + MPMX26_03123 0.39 -0.2 37,071 + MPMX26_03124 0.12 +0.6 37,188 + MPMX26_03124 0.72 +0.8 37,205 + MPMX26_03124 0.81 +0.9 37,207 + MPMX26_03124 0.82 -0.2 37,231 + +1.3 37,495 + +0.5
Or see this region's nucleotide sequence