Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02885 and MPMX26_02886 are separated by 276 nucleotides MPMX26_02886 and MPMX26_02887 are separated by 76 nucleotides MPMX26_02887 and MPMX26_02888 are separated by 145 nucleotides MPMX26_02888 and MPMX26_02889 are separated by 51 nucleotides
MPMX26_02885: MPMX26_02885 - hypothetical protein, at 2,986,580 to 2,987,224
_02885
MPMX26_02886: MPMX26_02886 - hypothetical protein, at 2,987,501 to 2,987,827
_02886
MPMX26_02887: MPMX26_02887 - General stress protein 39, at 2,987,904 to 2,988,770
_02887
MPMX26_02888: MPMX26_02888 - Single-stranded DNA-binding protein, at 2,988,916 to 2,989,500
_02888
MPMX26_02889: MPMX26_02889 - Inner membrane transport protein YajR, at 2,989,552 to 2,990,916
_02889
Position (kb)
2987
2988
2989 Strain fitness (log2 ratio)
-1
0
1 at 2987.011 kb on - strand, within MPMX26_02885 at 2987.504 kb on - strand at 2987.619 kb on + strand, within MPMX26_02886 at 2987.706 kb on + strand, within MPMX26_02886 at 2987.771 kb on + strand, within MPMX26_02886 at 2988.099 kb on + strand, within MPMX26_02887 at 2988.233 kb on + strand, within MPMX26_02887 at 2988.574 kb on + strand, within MPMX26_02887 at 2988.578 kb on + strand, within MPMX26_02887 at 2988.643 kb on + strand, within MPMX26_02887 at 2988.654 kb on + strand, within MPMX26_02887 at 2988.913 kb on - strand at 2989.573 kb on - strand at 2989.579 kb on - strand at 2989.599 kb on - strand at 2989.634 kb on - strand at 2989.634 kb on - strand at 2989.655 kb on - strand at 2989.655 kb on - strand at 2989.655 kb on - strand at 2989.658 kb on + strand at 2989.660 kb on - strand at 2989.666 kb on + strand at 2989.666 kb on - strand at 2989.674 kb on - strand at 2989.676 kb on - strand at 2989.702 kb on + strand, within MPMX26_02889 at 2989.707 kb on + strand, within MPMX26_02889 at 2989.712 kb on + strand, within MPMX26_02889 at 2989.715 kb on - strand, within MPMX26_02889 at 2989.732 kb on + strand, within MPMX26_02889 at 2989.740 kb on - strand, within MPMX26_02889 at 2989.740 kb on - strand, within MPMX26_02889 at 2989.740 kb on - strand, within MPMX26_02889 at 2989.767 kb on - strand, within MPMX26_02889 at 2989.768 kb on - strand, within MPMX26_02889
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 2,987,011 - MPMX26_02885 0.67 -0.8 2,987,504 - +0.4 2,987,619 + MPMX26_02886 0.36 +0.2 2,987,706 + MPMX26_02886 0.63 +0.3 2,987,771 + MPMX26_02886 0.83 +0.4 2,988,099 + MPMX26_02887 0.22 +0.2 2,988,233 + MPMX26_02887 0.38 +0.0 2,988,574 + MPMX26_02887 0.77 -0.3 2,988,578 + MPMX26_02887 0.78 +0.4 2,988,643 + MPMX26_02887 0.85 -0.8 2,988,654 + MPMX26_02887 0.87 -0.1 2,988,913 - +0.5 2,989,573 - +0.2 2,989,579 - +0.1 2,989,599 - -0.6 2,989,634 - -0.3 2,989,634 - -0.1 2,989,655 - +0.5 2,989,655 - -0.3 2,989,655 - +0.2 2,989,658 + -0.1 2,989,660 - +0.5 2,989,666 + -0.6 2,989,666 - +0.6 2,989,674 - +0.5 2,989,676 - +0.2 2,989,702 + MPMX26_02889 0.11 +0.3 2,989,707 + MPMX26_02889 0.11 +0.4 2,989,712 + MPMX26_02889 0.12 -0.8 2,989,715 - MPMX26_02889 0.12 -0.6 2,989,732 + MPMX26_02889 0.13 +0.3 2,989,740 - MPMX26_02889 0.14 +0.2 2,989,740 - MPMX26_02889 0.14 +0.5 2,989,740 - MPMX26_02889 0.14 +0.4 2,989,767 - MPMX26_02889 0.16 +0.1 2,989,768 - MPMX26_02889 0.16 -0.3
Or see this region's nucleotide sequence