Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01665 and MPMX26_01666 are separated by 108 nucleotides MPMX26_01666 and MPMX26_01667 are separated by 33 nucleotides MPMX26_01667 and MPMX26_01668 are separated by 84 nucleotides
MPMX26_01665: MPMX26_01665 - hypothetical protein, at 1,721,105 to 1,721,788
_01665
MPMX26_01666: MPMX26_01666 - hypothetical protein, at 1,721,897 to 1,722,373
_01666
MPMX26_01667: MPMX26_01667 - hypothetical protein, at 1,722,407 to 1,723,276
_01667
MPMX26_01668: MPMX26_01668 - Lipid-A-disaccharide synthase, at 1,723,361 to 1,724,536
_01668
Position (kb)
1722
1723
1724 Strain fitness (log2 ratio)
-2
-1
0
1 at 1721.938 kb on - strand at 1721.939 kb on - strand at 1721.951 kb on - strand, within MPMX26_01666 at 1721.980 kb on - strand, within MPMX26_01666 at 1721.980 kb on - strand, within MPMX26_01666 at 1721.980 kb on - strand, within MPMX26_01666 at 1722.095 kb on - strand, within MPMX26_01666 at 1722.178 kb on - strand, within MPMX26_01666 at 1722.212 kb on - strand, within MPMX26_01666 at 1722.277 kb on - strand, within MPMX26_01666 at 1722.277 kb on - strand, within MPMX26_01666 at 1722.277 kb on - strand, within MPMX26_01666 at 1722.277 kb on - strand, within MPMX26_01666 at 1722.287 kb on - strand, within MPMX26_01666 at 1722.287 kb on - strand, within MPMX26_01666 at 1722.287 kb on - strand, within MPMX26_01666 at 1722.376 kb on - strand at 1722.376 kb on - strand at 1722.443 kb on + strand at 1722.457 kb on + strand at 1722.457 kb on + strand at 1722.472 kb on + strand at 1722.506 kb on + strand, within MPMX26_01667 at 1722.572 kb on + strand, within MPMX26_01667 at 1722.577 kb on + strand, within MPMX26_01667 at 1722.773 kb on + strand, within MPMX26_01667 at 1722.799 kb on + strand, within MPMX26_01667 at 1722.815 kb on + strand, within MPMX26_01667 at 1722.832 kb on + strand, within MPMX26_01667 at 1722.838 kb on + strand, within MPMX26_01667 at 1722.845 kb on + strand, within MPMX26_01667 at 1722.845 kb on + strand, within MPMX26_01667 at 1722.845 kb on + strand, within MPMX26_01667 at 1722.845 kb on + strand, within MPMX26_01667 at 1722.845 kb on + strand, within MPMX26_01667 at 1722.845 kb on + strand, within MPMX26_01667 at 1722.845 kb on + strand, within MPMX26_01667 at 1722.949 kb on + strand, within MPMX26_01667 at 1723.181 kb on + strand, within MPMX26_01667 at 1723.181 kb on + strand, within MPMX26_01667 at 1723.181 kb on + strand, within MPMX26_01667 at 1723.181 kb on + strand, within MPMX26_01667 at 1723.181 kb on + strand, within MPMX26_01667 at 1723.181 kb on + strand, within MPMX26_01667 at 1723.189 kb on + strand, within MPMX26_01667 at 1723.189 kb on + strand, within MPMX26_01667 at 1723.243 kb on + strand at 1723.393 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 1,721,938 - +0.8 1,721,939 - -0.6 1,721,951 - MPMX26_01666 0.11 +0.5 1,721,980 - MPMX26_01666 0.17 +0.2 1,721,980 - MPMX26_01666 0.17 +0.1 1,721,980 - MPMX26_01666 0.17 +0.2 1,722,095 - MPMX26_01666 0.42 -0.4 1,722,178 - MPMX26_01666 0.59 +0.4 1,722,212 - MPMX26_01666 0.66 +0.2 1,722,277 - MPMX26_01666 0.80 +0.1 1,722,277 - MPMX26_01666 0.80 -0.1 1,722,277 - MPMX26_01666 0.80 +0.0 1,722,277 - MPMX26_01666 0.80 +0.2 1,722,287 - MPMX26_01666 0.82 +0.6 1,722,287 - MPMX26_01666 0.82 -0.6 1,722,287 - MPMX26_01666 0.82 -0.5 1,722,376 - +0.3 1,722,376 - +1.0 1,722,443 + -0.9 1,722,457 + -1.7 1,722,457 + -1.0 1,722,472 + -0.3 1,722,506 + MPMX26_01667 0.11 -0.2 1,722,572 + MPMX26_01667 0.19 -0.1 1,722,577 + MPMX26_01667 0.20 +0.1 1,722,773 + MPMX26_01667 0.42 -0.6 1,722,799 + MPMX26_01667 0.45 -0.8 1,722,815 + MPMX26_01667 0.47 -1.4 1,722,832 + MPMX26_01667 0.49 -0.7 1,722,838 + MPMX26_01667 0.50 -1.3 1,722,845 + MPMX26_01667 0.50 -1.0 1,722,845 + MPMX26_01667 0.50 +0.5 1,722,845 + MPMX26_01667 0.50 -0.3 1,722,845 + MPMX26_01667 0.50 -1.3 1,722,845 + MPMX26_01667 0.50 +0.1 1,722,845 + MPMX26_01667 0.50 -1.3 1,722,845 + MPMX26_01667 0.50 -0.7 1,722,949 + MPMX26_01667 0.62 -0.9 1,723,181 + MPMX26_01667 0.89 -2.3 1,723,181 + MPMX26_01667 0.89 +0.3 1,723,181 + MPMX26_01667 0.89 -0.2 1,723,181 + MPMX26_01667 0.89 -1.8 1,723,181 + MPMX26_01667 0.89 -1.2 1,723,181 + MPMX26_01667 0.89 +0.4 1,723,189 + MPMX26_01667 0.90 +0.1 1,723,189 + MPMX26_01667 0.90 +0.1 1,723,243 + -1.7 1,723,393 - -0.9
Or see this region's nucleotide sequence