Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01359

Experiment: Ammonium chloride (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01357 and MPMX26_01358 are separated by 206 nucleotidesMPMX26_01358 and MPMX26_01359 are separated by 134 nucleotidesMPMX26_01359 and MPMX26_01360 are separated by 391 nucleotides MPMX26_01357: MPMX26_01357 - hypothetical protein, at 1,427,659 to 1,428,102 _01357 MPMX26_01358: MPMX26_01358 - hypothetical protein, at 1,428,309 to 1,428,617 _01358 MPMX26_01359: MPMX26_01359 - hypothetical protein, at 1,428,752 to 1,429,192 _01359 MPMX26_01360: MPMX26_01360 - hypothetical protein, at 1,429,584 to 1,431,167 _01360 Position (kb) 1428 1429 1430Strain fitness (log2 ratio) -1 0 1at 1428.374 kb on + strand, within MPMX26_01358at 1428.374 kb on + strand, within MPMX26_01358at 1428.524 kb on + strand, within MPMX26_01358at 1428.883 kb on - strand, within MPMX26_01359at 1428.898 kb on - strand, within MPMX26_01359at 1428.941 kb on - strand, within MPMX26_01359at 1429.022 kb on - strand, within MPMX26_01359at 1429.100 kb on - strand, within MPMX26_01359

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium chloride (N)
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1,428,374 + MPMX26_01358 0.21 -0.2
1,428,374 + MPMX26_01358 0.21 +0.2
1,428,524 + MPMX26_01358 0.70 -0.3
1,428,883 - MPMX26_01359 0.30 +0.1
1,428,898 - MPMX26_01359 0.33 -0.5
1,428,941 - MPMX26_01359 0.43 +0.3
1,429,022 - MPMX26_01359 0.61 -0.1
1,429,100 - MPMX26_01359 0.79 -0.7

Or see this region's nucleotide sequence