Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01172 and MPMX26_01173 are separated by 186 nucleotides MPMX26_01173 and MPMX26_01174 are separated by 364 nucleotides MPMX26_01174 and MPMX26_01175 overlap by 1 nucleotides
MPMX26_01172: MPMX26_01172 - hypothetical protein, at 1,239,838 to 1,240,338
_01172
MPMX26_01173: MPMX26_01173 - hypothetical protein, at 1,240,525 to 1,240,959
_01173
MPMX26_01174: MPMX26_01174 - Peptide chain release factor RF1, at 1,241,324 to 1,242,412
_01174
MPMX26_01175: MPMX26_01175 - Release factor glutamine methyltransferase, at 1,242,412 to 1,243,236
_01175
Position (kb)
1241
1242
1243 Strain fitness (log2 ratio)
-2
-1
0
1 at 1240.617 kb on - strand, within MPMX26_01173 at 1240.646 kb on - strand, within MPMX26_01173 at 1240.651 kb on - strand, within MPMX26_01173 at 1240.656 kb on - strand, within MPMX26_01173 at 1240.656 kb on - strand, within MPMX26_01173 at 1240.678 kb on - strand, within MPMX26_01173 at 1240.711 kb on - strand, within MPMX26_01173 at 1240.713 kb on - strand, within MPMX26_01173 at 1240.713 kb on - strand, within MPMX26_01173 at 1240.713 kb on - strand, within MPMX26_01173 at 1240.713 kb on - strand, within MPMX26_01173 at 1240.720 kb on - strand, within MPMX26_01173 at 1240.761 kb on - strand, within MPMX26_01173 at 1240.766 kb on - strand, within MPMX26_01173 at 1240.785 kb on - strand, within MPMX26_01173 at 1240.785 kb on - strand, within MPMX26_01173 at 1240.785 kb on - strand, within MPMX26_01173 at 1240.785 kb on - strand, within MPMX26_01173 at 1240.785 kb on - strand, within MPMX26_01173 at 1240.785 kb on - strand, within MPMX26_01173 at 1240.813 kb on - strand, within MPMX26_01173 at 1240.813 kb on - strand, within MPMX26_01173 at 1240.822 kb on - strand, within MPMX26_01173 at 1240.833 kb on - strand, within MPMX26_01173 at 1240.873 kb on - strand, within MPMX26_01173 at 1240.885 kb on - strand, within MPMX26_01173 at 1240.885 kb on - strand, within MPMX26_01173 at 1240.885 kb on - strand, within MPMX26_01173 at 1240.904 kb on - strand, within MPMX26_01173 at 1240.929 kb on - strand at 1240.944 kb on - strand at 1241.280 kb on + strand at 1241.306 kb on + strand at 1242.365 kb on + strand at 1242.374 kb on + strand at 1242.426 kb on + strand at 1242.436 kb on + strand at 1242.436 kb on + strand at 1242.436 kb on + strand at 1242.441 kb on + strand at 1242.441 kb on + strand at 1242.441 kb on + strand at 1242.441 kb on + strand at 1242.443 kb on + strand at 1242.445 kb on + strand at 1242.445 kb on + strand at 1242.455 kb on + strand at 1242.455 kb on + strand at 1242.455 kb on + strand at 1242.455 kb on + strand at 1242.455 kb on + strand at 1242.463 kb on - strand at 1242.562 kb on + strand, within MPMX26_01175 at 1242.574 kb on + strand, within MPMX26_01175 at 1242.648 kb on + strand, within MPMX26_01175 at 1242.665 kb on + strand, within MPMX26_01175 at 1242.706 kb on + strand, within MPMX26_01175 at 1242.745 kb on + strand, within MPMX26_01175 at 1242.755 kb on + strand, within MPMX26_01175 at 1242.755 kb on + strand, within MPMX26_01175 at 1242.758 kb on + strand, within MPMX26_01175 at 1242.808 kb on + strand, within MPMX26_01175 at 1242.808 kb on + strand, within MPMX26_01175 at 1242.836 kb on + strand, within MPMX26_01175 at 1242.836 kb on + strand, within MPMX26_01175 at 1242.836 kb on + strand, within MPMX26_01175 at 1242.836 kb on + strand, within MPMX26_01175 at 1242.836 kb on + strand, within MPMX26_01175 at 1242.836 kb on + strand, within MPMX26_01175 at 1242.836 kb on + strand, within MPMX26_01175 at 1242.836 kb on + strand, within MPMX26_01175 at 1242.836 kb on + strand, within MPMX26_01175 at 1242.836 kb on + strand, within MPMX26_01175 at 1242.836 kb on + strand, within MPMX26_01175 at 1242.836 kb on + strand, within MPMX26_01175 at 1242.836 kb on + strand, within MPMX26_01175 at 1242.862 kb on + strand, within MPMX26_01175 at 1242.997 kb on + strand, within MPMX26_01175 at 1243.032 kb on + strand, within MPMX26_01175 at 1243.037 kb on + strand, within MPMX26_01175 at 1243.074 kb on + strand, within MPMX26_01175 at 1243.074 kb on + strand, within MPMX26_01175 at 1243.074 kb on + strand, within MPMX26_01175 at 1243.074 kb on + strand, within MPMX26_01175 at 1243.074 kb on + strand, within MPMX26_01175 at 1243.074 kb on + strand, within MPMX26_01175 at 1243.074 kb on + strand, within MPMX26_01175 at 1243.099 kb on + strand, within MPMX26_01175 at 1243.103 kb on + strand, within MPMX26_01175 at 1243.108 kb on + strand, within MPMX26_01175 at 1243.121 kb on + strand, within MPMX26_01175 at 1243.121 kb on + strand, within MPMX26_01175 at 1243.159 kb on + strand at 1243.207 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 1,240,617 - MPMX26_01173 0.21 -0.2 1,240,646 - MPMX26_01173 0.28 +1.2 1,240,651 - MPMX26_01173 0.29 -0.1 1,240,656 - MPMX26_01173 0.30 +1.1 1,240,656 - MPMX26_01173 0.30 -0.0 1,240,678 - MPMX26_01173 0.35 -0.1 1,240,711 - MPMX26_01173 0.43 -0.0 1,240,713 - MPMX26_01173 0.43 -0.0 1,240,713 - MPMX26_01173 0.43 +0.2 1,240,713 - MPMX26_01173 0.43 +0.0 1,240,713 - MPMX26_01173 0.43 -0.2 1,240,720 - MPMX26_01173 0.45 -0.2 1,240,761 - MPMX26_01173 0.54 -0.1 1,240,766 - MPMX26_01173 0.55 +0.4 1,240,785 - MPMX26_01173 0.60 +0.2 1,240,785 - MPMX26_01173 0.60 +0.3 1,240,785 - MPMX26_01173 0.60 -0.3 1,240,785 - MPMX26_01173 0.60 -0.8 1,240,785 - MPMX26_01173 0.60 +0.6 1,240,785 - MPMX26_01173 0.60 +0.2 1,240,813 - MPMX26_01173 0.66 +0.1 1,240,813 - MPMX26_01173 0.66 -0.1 1,240,822 - MPMX26_01173 0.68 +0.0 1,240,833 - MPMX26_01173 0.71 +0.1 1,240,873 - MPMX26_01173 0.80 -0.2 1,240,885 - MPMX26_01173 0.83 +0.4 1,240,885 - MPMX26_01173 0.83 +0.5 1,240,885 - MPMX26_01173 0.83 -0.1 1,240,904 - MPMX26_01173 0.87 -1.2 1,240,929 - +0.2 1,240,944 - -0.5 1,241,280 + +0.1 1,241,306 + -0.4 1,242,365 + -0.0 1,242,374 + +0.8 1,242,426 + -1.9 1,242,436 + -0.5 1,242,436 + -0.1 1,242,436 + +0.8 1,242,441 + +1.1 1,242,441 + -0.8 1,242,441 + +1.2 1,242,441 + +1.1 1,242,443 + -1.4 1,242,445 + -1.7 1,242,445 + -1.0 1,242,455 + +0.0 1,242,455 + -1.4 1,242,455 + -0.9 1,242,455 + -0.4 1,242,455 + +0.5 1,242,463 - +0.5 1,242,562 + MPMX26_01175 0.18 -0.2 1,242,574 + MPMX26_01175 0.20 +0.8 1,242,648 + MPMX26_01175 0.29 +0.8 1,242,665 + MPMX26_01175 0.31 +1.6 1,242,706 + MPMX26_01175 0.36 -0.8 1,242,745 + MPMX26_01175 0.40 +1.4 1,242,755 + MPMX26_01175 0.42 -1.4 1,242,755 + MPMX26_01175 0.42 -0.5 1,242,758 + MPMX26_01175 0.42 +1.0 1,242,808 + MPMX26_01175 0.48 -0.4 1,242,808 + MPMX26_01175 0.48 -1.2 1,242,836 + MPMX26_01175 0.51 -1.3 1,242,836 + MPMX26_01175 0.51 -0.3 1,242,836 + MPMX26_01175 0.51 +0.4 1,242,836 + MPMX26_01175 0.51 -0.3 1,242,836 + MPMX26_01175 0.51 +0.5 1,242,836 + MPMX26_01175 0.51 +0.8 1,242,836 + MPMX26_01175 0.51 +0.5 1,242,836 + MPMX26_01175 0.51 +0.2 1,242,836 + MPMX26_01175 0.51 -0.2 1,242,836 + MPMX26_01175 0.51 +1.1 1,242,836 + MPMX26_01175 0.51 -0.5 1,242,836 + MPMX26_01175 0.51 -2.0 1,242,836 + MPMX26_01175 0.51 -0.5 1,242,862 + MPMX26_01175 0.55 -1.2 1,242,997 + MPMX26_01175 0.71 +0.5 1,243,032 + MPMX26_01175 0.75 +0.5 1,243,037 + MPMX26_01175 0.76 +0.8 1,243,074 + MPMX26_01175 0.80 -1.5 1,243,074 + MPMX26_01175 0.80 -0.8 1,243,074 + MPMX26_01175 0.80 -0.6 1,243,074 + MPMX26_01175 0.80 -0.5 1,243,074 + MPMX26_01175 0.80 -1.2 1,243,074 + MPMX26_01175 0.80 +1.2 1,243,074 + MPMX26_01175 0.80 +0.5 1,243,099 + MPMX26_01175 0.83 -0.8 1,243,103 + MPMX26_01175 0.84 -0.8 1,243,108 + MPMX26_01175 0.84 -0.8 1,243,121 + MPMX26_01175 0.86 -1.2 1,243,121 + MPMX26_01175 0.86 -0.8 1,243,159 + -0.4 1,243,207 + -0.2
Or see this region's nucleotide sequence