Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00887

Experiment: Ammonium chloride (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00886 and MPMX26_00887 are separated by 83 nucleotidesMPMX26_00887 and MPMX26_00888 are separated by 106 nucleotidesMPMX26_00888 and MPMX26_00889 are separated by 143 nucleotides MPMX26_00886: MPMX26_00886 - N-ethylmaleimide reductase, at 932,428 to 933,555 _00886 MPMX26_00887: MPMX26_00887 - hypothetical protein, at 933,639 to 933,869 _00887 MPMX26_00888: MPMX26_00888 - HTH-type transcriptional repressor NemR, at 933,976 to 934,584 _00888 MPMX26_00889: MPMX26_00889 - NADPH-dependent curcumin reductase, at 934,728 to 935,747 _00889 Position (kb) 933 934Strain fitness (log2 ratio) -1 0 1at 932.749 kb on + strand, within MPMX26_00886at 932.754 kb on + strand, within MPMX26_00886at 932.832 kb on + strand, within MPMX26_00886at 932.839 kb on + strand, within MPMX26_00886at 932.839 kb on + strand, within MPMX26_00886at 932.842 kb on + strand, within MPMX26_00886at 932.856 kb on + strand, within MPMX26_00886at 932.856 kb on + strand, within MPMX26_00886at 932.884 kb on + strand, within MPMX26_00886at 932.914 kb on + strand, within MPMX26_00886at 933.027 kb on + strand, within MPMX26_00886at 933.037 kb on + strand, within MPMX26_00886at 933.087 kb on + strand, within MPMX26_00886at 933.160 kb on + strand, within MPMX26_00886at 933.274 kb on + strand, within MPMX26_00886at 933.321 kb on + strand, within MPMX26_00886at 933.327 kb on + strand, within MPMX26_00886at 933.355 kb on + strand, within MPMX26_00886at 933.360 kb on + strand, within MPMX26_00886at 933.360 kb on + strand, within MPMX26_00886at 933.468 kb on + strandat 933.477 kb on + strandat 933.480 kb on + strandat 933.502 kb on + strandat 933.502 kb on + strandat 933.540 kb on + strandat 934.070 kb on - strand, within MPMX26_00888at 934.070 kb on - strand, within MPMX26_00888at 934.080 kb on - strand, within MPMX26_00888at 934.111 kb on - strand, within MPMX26_00888at 934.111 kb on - strand, within MPMX26_00888at 934.119 kb on - strand, within MPMX26_00888at 934.128 kb on - strand, within MPMX26_00888at 934.128 kb on - strand, within MPMX26_00888at 934.138 kb on - strand, within MPMX26_00888at 934.181 kb on - strand, within MPMX26_00888at 934.204 kb on - strand, within MPMX26_00888at 934.205 kb on - strand, within MPMX26_00888at 934.205 kb on - strand, within MPMX26_00888at 934.205 kb on - strand, within MPMX26_00888at 934.222 kb on - strand, within MPMX26_00888at 934.289 kb on - strand, within MPMX26_00888at 934.290 kb on - strand, within MPMX26_00888at 934.356 kb on - strand, within MPMX26_00888at 934.359 kb on - strand, within MPMX26_00888at 934.393 kb on - strand, within MPMX26_00888at 934.466 kb on - strand, within MPMX26_00888at 934.466 kb on - strand, within MPMX26_00888at 934.488 kb on - strand, within MPMX26_00888at 934.494 kb on - strand, within MPMX26_00888at 934.526 kb on - strandat 934.526 kb on - strandat 934.526 kb on - strandat 934.531 kb on - strandat 934.579 kb on - strandat 934.580 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium chloride (N)
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932,749 + MPMX26_00886 0.28 -0.2
932,754 + MPMX26_00886 0.29 +0.2
932,832 + MPMX26_00886 0.36 +0.9
932,839 + MPMX26_00886 0.36 -0.2
932,839 + MPMX26_00886 0.36 +0.4
932,842 + MPMX26_00886 0.37 -0.6
932,856 + MPMX26_00886 0.38 +0.5
932,856 + MPMX26_00886 0.38 +0.4
932,884 + MPMX26_00886 0.40 -0.1
932,914 + MPMX26_00886 0.43 +0.7
933,027 + MPMX26_00886 0.53 +0.5
933,037 + MPMX26_00886 0.54 -1.0
933,087 + MPMX26_00886 0.58 -0.1
933,160 + MPMX26_00886 0.65 -0.6
933,274 + MPMX26_00886 0.75 -1.0
933,321 + MPMX26_00886 0.79 +1.4
933,327 + MPMX26_00886 0.80 +0.1
933,355 + MPMX26_00886 0.82 +0.5
933,360 + MPMX26_00886 0.83 +0.1
933,360 + MPMX26_00886 0.83 -0.8
933,468 + +0.1
933,477 + +0.8
933,480 + +0.2
933,502 + +0.4
933,502 + -1.0
933,540 + +0.7
934,070 - MPMX26_00888 0.15 +0.0
934,070 - MPMX26_00888 0.15 -1.0
934,080 - MPMX26_00888 0.17 -0.0
934,111 - MPMX26_00888 0.22 +0.1
934,111 - MPMX26_00888 0.22 -0.0
934,119 - MPMX26_00888 0.23 -0.3
934,128 - MPMX26_00888 0.25 +0.2
934,128 - MPMX26_00888 0.25 +0.4
934,138 - MPMX26_00888 0.27 -0.1
934,181 - MPMX26_00888 0.34 +0.6
934,204 - MPMX26_00888 0.37 -0.5
934,205 - MPMX26_00888 0.38 +0.1
934,205 - MPMX26_00888 0.38 -0.3
934,205 - MPMX26_00888 0.38 +0.5
934,222 - MPMX26_00888 0.40 +0.7
934,289 - MPMX26_00888 0.51 +0.6
934,290 - MPMX26_00888 0.52 +0.5
934,356 - MPMX26_00888 0.62 -0.4
934,359 - MPMX26_00888 0.63 -0.3
934,393 - MPMX26_00888 0.68 +0.6
934,466 - MPMX26_00888 0.80 -0.4
934,466 - MPMX26_00888 0.80 -0.3
934,488 - MPMX26_00888 0.84 -0.5
934,494 - MPMX26_00888 0.85 +0.3
934,526 - +0.5
934,526 - -0.1
934,526 - -0.1
934,531 - +0.0
934,579 - +0.2
934,580 - +0.2

Or see this region's nucleotide sequence