Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00648

Experiment: Ammonium chloride (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00646 and MPMX26_00647 are separated by 134 nucleotidesMPMX26_00647 and MPMX26_00648 are separated by 36 nucleotidesMPMX26_00648 and MPMX26_00649 are separated by 199 nucleotides MPMX26_00646: MPMX26_00646 - Ribonuclease G, at 689,158 to 690,612 _00646 MPMX26_00647: MPMX26_00647 - hypothetical protein, at 690,747 to 690,920 _00647 MPMX26_00648: MPMX26_00648 - O-acyltransferase WSD, at 690,957 to 692,342 _00648 MPMX26_00649: MPMX26_00649 - Phosphoadenosine phosphosulfate reductase, at 692,542 to 693,276 _00649 Position (kb) 690 691 692 693Strain fitness (log2 ratio) -2 -1 0 1at 689.974 kb on + strand, within MPMX26_00646at 689.974 kb on + strand, within MPMX26_00646at 690.027 kb on + strand, within MPMX26_00646at 690.027 kb on + strand, within MPMX26_00646at 690.034 kb on + strand, within MPMX26_00646at 690.054 kb on + strand, within MPMX26_00646at 690.062 kb on + strand, within MPMX26_00646at 690.062 kb on + strand, within MPMX26_00646at 690.062 kb on + strand, within MPMX26_00646at 690.062 kb on + strand, within MPMX26_00646at 690.062 kb on + strand, within MPMX26_00646at 690.062 kb on + strand, within MPMX26_00646at 690.085 kb on + strand, within MPMX26_00646at 690.337 kb on + strand, within MPMX26_00646at 690.378 kb on + strand, within MPMX26_00646at 690.476 kb on + strandat 690.484 kb on + strandat 690.484 kb on + strandat 690.484 kb on + strandat 690.484 kb on + strandat 690.484 kb on + strandat 690.484 kb on + strandat 690.484 kb on + strandat 690.495 kb on + strandat 690.498 kb on + strandat 690.576 kb on + strandat 690.576 kb on + strandat 690.688 kb on + strandat 690.698 kb on + strandat 690.718 kb on + strandat 690.718 kb on + strandat 690.851 kb on + strand, within MPMX26_00647at 690.856 kb on + strand, within MPMX26_00647at 690.876 kb on + strand, within MPMX26_00647at 690.899 kb on + strand, within MPMX26_00647at 690.899 kb on + strand, within MPMX26_00647at 690.962 kb on - strandat 691.002 kb on - strandat 691.067 kb on - strandat 691.067 kb on - strandat 691.133 kb on - strand, within MPMX26_00648at 691.241 kb on - strand, within MPMX26_00648at 691.241 kb on - strand, within MPMX26_00648at 691.296 kb on - strand, within MPMX26_00648at 691.296 kb on - strand, within MPMX26_00648at 691.296 kb on - strand, within MPMX26_00648at 691.298 kb on - strand, within MPMX26_00648at 691.298 kb on - strand, within MPMX26_00648at 691.298 kb on - strand, within MPMX26_00648at 691.383 kb on - strand, within MPMX26_00648at 691.407 kb on - strand, within MPMX26_00648at 691.413 kb on - strand, within MPMX26_00648at 691.413 kb on - strand, within MPMX26_00648at 691.413 kb on - strand, within MPMX26_00648at 691.451 kb on - strand, within MPMX26_00648at 691.451 kb on - strand, within MPMX26_00648at 691.482 kb on - strand, within MPMX26_00648at 691.515 kb on - strand, within MPMX26_00648at 691.520 kb on - strand, within MPMX26_00648at 691.520 kb on - strand, within MPMX26_00648at 691.551 kb on - strand, within MPMX26_00648at 691.551 kb on - strand, within MPMX26_00648at 691.551 kb on - strand, within MPMX26_00648at 691.551 kb on - strand, within MPMX26_00648at 691.617 kb on - strand, within MPMX26_00648at 691.619 kb on - strand, within MPMX26_00648at 691.641 kb on - strand, within MPMX26_00648at 691.656 kb on - strand, within MPMX26_00648at 691.656 kb on - strand, within MPMX26_00648at 691.656 kb on - strand, within MPMX26_00648at 691.709 kb on - strand, within MPMX26_00648at 691.709 kb on - strand, within MPMX26_00648at 691.740 kb on - strand, within MPMX26_00648at 691.740 kb on - strand, within MPMX26_00648at 691.740 kb on - strand, within MPMX26_00648at 691.742 kb on - strand, within MPMX26_00648at 691.742 kb on - strand, within MPMX26_00648at 691.773 kb on - strand, within MPMX26_00648at 691.773 kb on - strand, within MPMX26_00648at 691.773 kb on - strand, within MPMX26_00648at 691.830 kb on - strand, within MPMX26_00648at 691.853 kb on - strand, within MPMX26_00648at 691.857 kb on - strand, within MPMX26_00648at 691.868 kb on - strand, within MPMX26_00648at 691.880 kb on - strand, within MPMX26_00648at 691.985 kb on - strand, within MPMX26_00648at 692.004 kb on - strand, within MPMX26_00648at 692.013 kb on - strand, within MPMX26_00648at 692.040 kb on - strand, within MPMX26_00648at 692.066 kb on - strand, within MPMX26_00648at 692.066 kb on - strand, within MPMX26_00648at 692.148 kb on - strand, within MPMX26_00648at 692.148 kb on - strand, within MPMX26_00648at 692.180 kb on - strand, within MPMX26_00648at 692.286 kb on - strandat 692.608 kb on - strandat 692.608 kb on - strandat 692.730 kb on - strand, within MPMX26_00649at 692.731 kb on - strand, within MPMX26_00649at 692.764 kb on - strand, within MPMX26_00649at 692.764 kb on - strand, within MPMX26_00649at 692.781 kb on - strand, within MPMX26_00649at 692.893 kb on - strand, within MPMX26_00649at 692.961 kb on - strand, within MPMX26_00649at 692.988 kb on - strand, within MPMX26_00649

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium chloride (N)
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689,974 + MPMX26_00646 0.56 -0.8
689,974 + MPMX26_00646 0.56 -1.3
690,027 + MPMX26_00646 0.60 -0.1
690,027 + MPMX26_00646 0.60 +0.1
690,034 + MPMX26_00646 0.60 -1.1
690,054 + MPMX26_00646 0.62 -0.9
690,062 + MPMX26_00646 0.62 -1.7
690,062 + MPMX26_00646 0.62 +0.1
690,062 + MPMX26_00646 0.62 -0.5
690,062 + MPMX26_00646 0.62 -0.5
690,062 + MPMX26_00646 0.62 -0.6
690,062 + MPMX26_00646 0.62 -0.4
690,085 + MPMX26_00646 0.64 -1.0
690,337 + MPMX26_00646 0.81 +0.4
690,378 + MPMX26_00646 0.84 -0.9
690,476 + +1.3
690,484 + -0.5
690,484 + -1.8
690,484 + -0.2
690,484 + -0.7
690,484 + -0.7
690,484 + -0.5
690,484 + +0.1
690,495 + -0.5
690,498 + -0.7
690,576 + -1.3
690,576 + -0.3
690,688 + +0.1
690,698 + -0.6
690,718 + +0.3
690,718 + +0.8
690,851 + MPMX26_00647 0.60 +0.2
690,856 + MPMX26_00647 0.63 -0.3
690,876 + MPMX26_00647 0.74 +0.5
690,899 + MPMX26_00647 0.87 +0.1
690,899 + MPMX26_00647 0.87 +0.2
690,962 - +0.8
691,002 - +0.1
691,067 - -0.8
691,067 - +0.4
691,133 - MPMX26_00648 0.13 -0.3
691,241 - MPMX26_00648 0.20 -0.3
691,241 - MPMX26_00648 0.20 -0.4
691,296 - MPMX26_00648 0.24 +0.4
691,296 - MPMX26_00648 0.24 -0.5
691,296 - MPMX26_00648 0.24 -0.3
691,298 - MPMX26_00648 0.25 -0.1
691,298 - MPMX26_00648 0.25 +0.2
691,298 - MPMX26_00648 0.25 -0.4
691,383 - MPMX26_00648 0.31 -0.3
691,407 - MPMX26_00648 0.32 +0.0
691,413 - MPMX26_00648 0.33 +0.8
691,413 - MPMX26_00648 0.33 -0.0
691,413 - MPMX26_00648 0.33 -0.1
691,451 - MPMX26_00648 0.36 -2.0
691,451 - MPMX26_00648 0.36 +0.0
691,482 - MPMX26_00648 0.38 -0.8
691,515 - MPMX26_00648 0.40 -0.4
691,520 - MPMX26_00648 0.41 +0.0
691,520 - MPMX26_00648 0.41 -0.6
691,551 - MPMX26_00648 0.43 -0.1
691,551 - MPMX26_00648 0.43 +0.2
691,551 - MPMX26_00648 0.43 -0.2
691,551 - MPMX26_00648 0.43 -0.1
691,617 - MPMX26_00648 0.48 -0.7
691,619 - MPMX26_00648 0.48 +0.3
691,641 - MPMX26_00648 0.49 -0.7
691,656 - MPMX26_00648 0.50 +0.7
691,656 - MPMX26_00648 0.50 -0.1
691,656 - MPMX26_00648 0.50 -0.0
691,709 - MPMX26_00648 0.54 -0.2
691,709 - MPMX26_00648 0.54 -0.5
691,740 - MPMX26_00648 0.56 -0.1
691,740 - MPMX26_00648 0.56 -0.6
691,740 - MPMX26_00648 0.56 -0.1
691,742 - MPMX26_00648 0.57 -0.0
691,742 - MPMX26_00648 0.57 -0.4
691,773 - MPMX26_00648 0.59 +0.4
691,773 - MPMX26_00648 0.59 -0.0
691,773 - MPMX26_00648 0.59 +0.0
691,830 - MPMX26_00648 0.63 -1.7
691,853 - MPMX26_00648 0.65 -0.7
691,857 - MPMX26_00648 0.65 -0.3
691,868 - MPMX26_00648 0.66 -0.6
691,880 - MPMX26_00648 0.67 -0.0
691,985 - MPMX26_00648 0.74 +0.1
692,004 - MPMX26_00648 0.76 -0.2
692,013 - MPMX26_00648 0.76 +1.1
692,040 - MPMX26_00648 0.78 -0.6
692,066 - MPMX26_00648 0.80 -0.2
692,066 - MPMX26_00648 0.80 +1.5
692,148 - MPMX26_00648 0.86 +0.0
692,148 - MPMX26_00648 0.86 -0.6
692,180 - MPMX26_00648 0.88 +0.1
692,286 - +0.3
692,608 - +0.2
692,608 - -2.4
692,730 - MPMX26_00649 0.26 -2.5
692,731 - MPMX26_00649 0.26 -2.3
692,764 - MPMX26_00649 0.30 -1.4
692,764 - MPMX26_00649 0.30 -0.6
692,781 - MPMX26_00649 0.33 -1.9
692,893 - MPMX26_00649 0.48 -0.8
692,961 - MPMX26_00649 0.57 -1.2
692,988 - MPMX26_00649 0.61 -0.6

Or see this region's nucleotide sequence