Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00107

Experiment: Ammonium chloride (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00106 and MPMX26_00107 are separated by 47 nucleotidesMPMX26_00107 and MPMX26_00108 are separated by 151 nucleotidesMPMX26_00108 and MPMX26_00109 are separated by 194 nucleotides MPMX26_00106: MPMX26_00106 - Succinate semialdehyde dehydrogenase [NAD(P)+] Sad, at 113,469 to 114,845 _00106 MPMX26_00107: MPMX26_00107 - hypothetical protein, at 114,893 to 115,480 _00107 MPMX26_00108: MPMX26_00108 - hypothetical protein, at 115,632 to 115,973 _00108 MPMX26_00109: MPMX26_00109 - Thioredoxin/glutathione peroxidase BtuE, at 116,168 to 116,710 _00109 Position (kb) 114 115 116Strain fitness (log2 ratio) -1 0 1 2at 114.732 kb on + strandat 114.769 kb on + strandat 114.769 kb on + strandat 114.776 kb on + strandat 114.807 kb on + strandat 114.879 kb on - strandat 114.934 kb on - strandat 115.046 kb on - strand, within MPMX26_00107at 115.051 kb on - strand, within MPMX26_00107at 115.051 kb on - strand, within MPMX26_00107at 115.051 kb on - strand, within MPMX26_00107at 115.051 kb on - strand, within MPMX26_00107at 115.051 kb on - strand, within MPMX26_00107at 115.058 kb on - strand, within MPMX26_00107at 115.228 kb on - strand, within MPMX26_00107at 115.228 kb on - strand, within MPMX26_00107at 115.238 kb on - strand, within MPMX26_00107at 115.238 kb on - strand, within MPMX26_00107at 115.307 kb on - strand, within MPMX26_00107at 115.378 kb on - strand, within MPMX26_00107at 115.378 kb on - strand, within MPMX26_00107at 115.379 kb on - strand, within MPMX26_00107at 115.424 kb on - strandat 115.826 kb on - strand, within MPMX26_00108at 116.220 kb on - strandat 116.228 kb on - strand, within MPMX26_00109at 116.248 kb on - strand, within MPMX26_00109at 116.313 kb on - strand, within MPMX26_00109at 116.356 kb on - strand, within MPMX26_00109at 116.379 kb on - strand, within MPMX26_00109at 116.381 kb on - strand, within MPMX26_00109at 116.381 kb on - strand, within MPMX26_00109at 116.381 kb on - strand, within MPMX26_00109at 116.381 kb on - strand, within MPMX26_00109at 116.381 kb on - strand, within MPMX26_00109at 116.381 kb on - strand, within MPMX26_00109

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium chloride (N)
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114,732 + +0.5
114,769 + +0.4
114,769 + -0.3
114,776 + -0.2
114,807 + +0.4
114,879 - -0.9
114,934 - -0.7
115,046 - MPMX26_00107 0.26 -0.2
115,051 - MPMX26_00107 0.27 +1.6
115,051 - MPMX26_00107 0.27 +0.2
115,051 - MPMX26_00107 0.27 +0.7
115,051 - MPMX26_00107 0.27 -0.4
115,051 - MPMX26_00107 0.27 -0.7
115,058 - MPMX26_00107 0.28 +0.6
115,228 - MPMX26_00107 0.57 -0.0
115,228 - MPMX26_00107 0.57 +1.2
115,238 - MPMX26_00107 0.59 +0.4
115,238 - MPMX26_00107 0.59 +1.1
115,307 - MPMX26_00107 0.70 +0.2
115,378 - MPMX26_00107 0.82 -0.8
115,378 - MPMX26_00107 0.82 +0.4
115,379 - MPMX26_00107 0.83 -0.8
115,424 - -0.0
115,826 - MPMX26_00108 0.57 +1.8
116,220 - +0.4
116,228 - MPMX26_00109 0.11 -0.1
116,248 - MPMX26_00109 0.15 -0.6
116,313 - MPMX26_00109 0.27 +0.1
116,356 - MPMX26_00109 0.35 -0.1
116,379 - MPMX26_00109 0.39 +0.8
116,381 - MPMX26_00109 0.39 +0.4
116,381 - MPMX26_00109 0.39 +1.1
116,381 - MPMX26_00109 0.39 +0.1
116,381 - MPMX26_00109 0.39 +0.7
116,381 - MPMX26_00109 0.39 +0.1
116,381 - MPMX26_00109 0.39 +0.1

Or see this region's nucleotide sequence