Strain Fitness in Pseudomonas sp. SVBP6 around COO64_RS26725

Experiment: supernatant control, M9 with 0.25X LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	supernatant control, M9 with 0.25X LB
2,494	+				+0.3
2,494	+				-0.0
2,494	+				+0.4
2,495	-				+0.3
2,495	-				+0.8
2,622	-		COO64_RS26720	0.19	-0.3
2,640	+		COO64_RS26720	0.21	+1.5
2,641	-		COO64_RS26720	0.21	+0.3
2,641	-		COO64_RS26720	0.21	+0.1
2,721	+		COO64_RS26720	0.29	+0.5
2,721	+		COO64_RS26720	0.29	-0.1
2,869	+		COO64_RS26720	0.44	-1.2
2,870	-		COO64_RS26720	0.44	-0.3
2,915	+		COO64_RS26720	0.49	-0.7
2,915	+		COO64_RS26720	0.49	+1.0
2,915	+		COO64_RS26720	0.49	+0.4
2,916	-		COO64_RS26720	0.49	-0.5
2,916	-		COO64_RS26720	0.49	-1.2
2,997	+		COO64_RS26720	0.57	-0.2
2,997	+		COO64_RS26720	0.57	+0.3
2,997	+		COO64_RS26720	0.57	-0.2
3,058	+		COO64_RS26720	0.63	-0.2
3,059	-		COO64_RS26720	0.63	-0.9
3,059	-		COO64_RS26720	0.63	+0.5
3,124	-		COO64_RS26720	0.70	-0.2
3,163	+		COO64_RS26720	0.74	+0.1
3,163	+		COO64_RS26720	0.74	-0.2
3,164	-		COO64_RS26720	0.74	+0.3
3,164	-		COO64_RS26720	0.74	+0.3
3,164	-		COO64_RS26720	0.74	-0.8
3,164	-		COO64_RS26720	0.74	-0.1
3,164	-		COO64_RS26720	0.74	+0.1
3,192	+		COO64_RS26720	0.77	+0.1
3,192	+		COO64_RS26720	0.77	+0.3
3,192	+		COO64_RS26720	0.77	-2.0
3,192	+		COO64_RS26720	0.77	-0.2
3,192	+		COO64_RS26720	0.77	-0.1
3,193	-		COO64_RS26720	0.77	-0.2
3,193	-		COO64_RS26720	0.77	+1.1
3,193	-		COO64_RS26720	0.77	-0.3
3,193	-		COO64_RS26720	0.77	-0.0
3,203	+		COO64_RS26720	0.78	+1.4
3,204	-		COO64_RS26720	0.78	-0.7
3,204	-		COO64_RS26720	0.78	-0.2
3,204	-		COO64_RS26720	0.78	+0.2
3,204	-		COO64_RS26720	0.78	+1.9
3,204	-		COO64_RS26720	0.78	+0.1
3,218	+		COO64_RS26720	0.79	-0.4
3,255	+		COO64_RS26720	0.83	-0.2
3,255	+		COO64_RS26720	0.83	+1.2
3,257	+		COO64_RS26720	0.83	+0.4
3,257	+		COO64_RS26720	0.83	+0.1
3,257	+		COO64_RS26720	0.83	-0.1
3,257	+		COO64_RS26720	0.83	-0.5
3,257	+		COO64_RS26720	0.83	+0.4
3,257	+		COO64_RS26720	0.83	+0.3
3,258	-		COO64_RS26720	0.83	-0.2
3,258	-		COO64_RS26720	0.83	+0.1
3,258	-		COO64_RS26720	0.83	-0.4
3,258	-		COO64_RS26720	0.83	-0.2
3,258	-		COO64_RS26720	0.83	-0.6
3,258	-		COO64_RS26720	0.83	-0.3
3,261	+		COO64_RS26720	0.84	-1.0
3,261	+		COO64_RS26720	0.84	-0.1
3,261	+		COO64_RS26720	0.84	-1.2
3,261	+		COO64_RS26720	0.84	-0.4
3,261	+		COO64_RS26720	0.84	+0.9
3,261	+		COO64_RS26720	0.84	+0.0
3,261	+		COO64_RS26720	0.84	-0.0
3,261	+		COO64_RS26720	0.84	-0.0
3,261	+		COO64_RS26720	0.84	+0.1
3,262	-		COO64_RS26720	0.84	+1.0
3,262	-		COO64_RS26720	0.84	-0.2
3,262	-		COO64_RS26720	0.84	-0.1
3,262	-		COO64_RS26720	0.84	-0.1
3,262	-		COO64_RS26720	0.84	-0.6
3,262	-		COO64_RS26720	0.84	+1.3
3,262	-		COO64_RS26720	0.84	+0.1
3,262	-		COO64_RS26720	0.84	-0.2
3,262	-		COO64_RS26720	0.84	+1.4
3,262	-		COO64_RS26720	0.84	+0.2
3,478	-				-0.3
3,721	+		COO64_RS26725	0.82	+0.3
3,721	+		COO64_RS26725	0.82	-0.3
3,721	+		COO64_RS26725	0.82	-0.1
3,721	+		COO64_RS26725	0.82	+0.7
3,722	-		COO64_RS26725	0.83	-1.6
3,722	-		COO64_RS26725	0.83	-1.3
3,722	-		COO64_RS26725	0.83	-2.8
3,765	+				+0.2
3,765	+				-1.2
3,765	+				+0.9
3,765	+				+0.6
3,765	+				+1.0
3,773	+				-0.7
3,773	+				-0.4
3,774	-				+1.1
3,774	-				+1.1
3,774	-				-1.1
3,774	-				-2.1
3,783	+				+0.9
3,783	+				-1.1
3,783	+				-1.2
3,783	+				+0.0
3,783	+				-1.2
3,783	+				-0.4
3,783	+				+0.4
3,783	+				-0.3
3,783	+				-2.7
3,784	-				-1.1
3,784	-				-0.8
3,784	-				-1.0
3,784	-				+0.7
3,784	-				+0.1
3,784	-				-1.4
3,784	-				+0.2
3,784	-				-0.3
3,784	-				-0.0
3,784	-				-0.7
3,797	+				-0.1
3,797	+				+0.5
3,797	+				-0.7
3,798	-				-0.4
3,798	-				-0.8
3,798	-				-0.1
3,798	-				-0.6
3,798	-				+0.6
3,902	+				-0.7
3,902	+				+0.9
3,902	+				+0.8
3,902	+				-0.5
3,903	-				+0.0
3,903	-				-0.2
3,903	-				-1.2
3,915	+				+0.2
3,915	+				-0.7
3,915	+				-1.2
3,916	-				-0.3
3,916	-				-0.5
3,916	-				-0.4
4,065	+				-0.8
4,066	-				-0.8
4,147	+				-0.3
4,148	-				+0.1
4,218	+		COO64_RS26730	0.17	+0.4
4,219	-		COO64_RS26730	0.17	-0.8
4,237	+		COO64_RS26730	0.21	-1.0
4,237	+		COO64_RS26730	0.21	-0.1
4,237	+		COO64_RS26730	0.21	+0.7
4,238	-		COO64_RS26730	0.21	+0.1
4,238	-		COO64_RS26730	0.21	-0.5
4,238	-		COO64_RS26730	0.21	+1.3
4,394	+		COO64_RS26730	0.57	+0.4
4,394	+		COO64_RS26730	0.57	+0.2
4,394	+		COO64_RS26730	0.57	-0.7
4,394	+		COO64_RS26730	0.57	+1.3
4,394	+		COO64_RS26730	0.57	-0.8
4,394	+		COO64_RS26730	0.57	-0.3
4,394	+		COO64_RS26730	0.57	-0.0
4,395	-		COO64_RS26730	0.57	+0.4
4,395	-		COO64_RS26730	0.57	-0.4
4,395	-		COO64_RS26730	0.57	-1.6
4,395	-		COO64_RS26730	0.57	-0.5
4,395	-		COO64_RS26730	0.57	+0.5
4,395	-		COO64_RS26730	0.57	-0.0
4,395	-		COO64_RS26730	0.57	-0.9
4,395	-		COO64_RS26730	0.57	-0.3
4,395	-		COO64_RS26730	0.57	+1.0
4,504	+		COO64_RS26730	0.82	+0.4
4,504	+		COO64_RS26730	0.82	-0.7
4,505	-		COO64_RS26730	0.83	+0.6
4,505	-		COO64_RS26730	0.83	+0.9
4,505	-		COO64_RS26730	0.83	+0.1
4,505	-		COO64_RS26730	0.83	+0.1
4,505	-		COO64_RS26730	0.83	-0.0
4,538	-				-1.7
4,540	+				-2.2
4,540	+				-0.8
4,540	+				-0.9
4,540	+				+0.2
4,540	+				+0.0
4,540	+				+0.5
4,540	+				-2.1
4,540	+				-1.0
4,540	+				-0.2
4,540	+				-0.1
4,540	+				+0.4
4,540	+				-0.7
4,540	+				-0.2
4,540	+				-0.1
4,540	+				-1.6
4,541	-				+0.1
4,541	-				+0.3
4,541	-				-1.0
4,541	-				-0.3
4,541	-				+0.5
4,541	-				-0.8
4,541	-				+2.1
4,541	-				+0.9
4,541	-				-0.5
4,556	+				-1.0
4,641	+				-0.3
4,642	-				-0.7
4,651	+				+0.0
4,651	+				-0.1
4,677	+				-0.7
4,678	-				+0.1
4,683	-				-0.4
4,706	-				+0.4
4,754	+				+0.3
4,754	+				-0.1
4,755	-				-0.4
4,755	-				-2.0
4,755	-				-1.2