Experiment: supernatant control, M9 with 0.25X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt nuoM and nuoN are separated by 7 nucleotides nuoN and COO64_RS24340 are separated by 210 nucleotides
COO64_RS24325: nuoM - NADH-quinone oxidoreductase subunit M, at 76,062 to 77,594
nuoM
COO64_RS24330: nuoN - NADH-quinone oxidoreductase subunit NuoN, at 77,602 to 79,071
nuoN
COO64_RS24340: COO64_RS24340 - TonB-dependent receptor domain-containing protein, at 79,282 to 81,336
_RS24340
Position (kb) 77
78
79
80 Strain fitness (log2 ratio) -2
-1
0
1
2 at 76.657 kb on - strand, within nuoM at 76.657 kb on - strand, within nuoM at 76.686 kb on + strand, within nuoM at 76.687 kb on - strand, within nuoM at 76.728 kb on + strand, within nuoM at 76.780 kb on + strand, within nuoM at 76.781 kb on - strand, within nuoM at 76.781 kb on - strand, within nuoM at 76.850 kb on + strand, within nuoM at 77.274 kb on - strand, within nuoM at 77.500 kb on - strand at 77.827 kb on + strand, within nuoN at 77.827 kb on + strand, within nuoN at 77.827 kb on + strand, within nuoN at 77.827 kb on + strand, within nuoN at 77.828 kb on - strand, within nuoN at 77.828 kb on - strand, within nuoN at 77.828 kb on - strand, within nuoN at 77.828 kb on - strand, within nuoN at 77.828 kb on - strand, within nuoN at 77.882 kb on - strand, within nuoN at 77.882 kb on - strand, within nuoN at 77.882 kb on - strand, within nuoN at 77.929 kb on + strand, within nuoN at 77.930 kb on - strand, within nuoN at 77.930 kb on - strand, within nuoN at 77.966 kb on + strand, within nuoN at 77.967 kb on - strand, within nuoN at 78.031 kb on + strand, within nuoN at 78.031 kb on + strand, within nuoN at 78.088 kb on + strand, within nuoN at 78.088 kb on + strand, within nuoN at 78.088 kb on + strand, within nuoN at 78.088 kb on + strand, within nuoN at 78.089 kb on - strand, within nuoN at 78.089 kb on - strand, within nuoN at 78.089 kb on - strand, within nuoN at 78.592 kb on + strand, within nuoN at 78.592 kb on + strand, within nuoN at 78.593 kb on - strand, within nuoN at 78.604 kb on + strand, within nuoN at 78.605 kb on - strand, within nuoN at 78.605 kb on - strand, within nuoN at 78.605 kb on - strand, within nuoN at 78.718 kb on + strand, within nuoN at 78.796 kb on + strand, within nuoN at 78.797 kb on - strand, within nuoN at 78.797 kb on - strand, within nuoN at 78.797 kb on - strand, within nuoN at 78.877 kb on + strand, within nuoN at 78.877 kb on + strand, within nuoN at 78.878 kb on - strand, within nuoN at 78.878 kb on - strand, within nuoN at 78.880 kb on + strand, within nuoN at 79.237 kb on + strand at 79.237 kb on + strand at 79.237 kb on + strand at 79.237 kb on + strand at 79.238 kb on - strand at 79.238 kb on - strand at 79.238 kb on - strand at 79.238 kb on - strand at 79.295 kb on + strand at 79.502 kb on + strand, within COO64_RS24340 at 79.502 kb on + strand, within COO64_RS24340 at 79.502 kb on + strand, within COO64_RS24340 at 79.503 kb on - strand, within COO64_RS24340 at 79.503 kb on - strand, within COO64_RS24340 at 79.503 kb on - strand, within COO64_RS24340 at 79.503 kb on - strand, within COO64_RS24340 at 79.511 kb on - strand, within COO64_RS24340 at 79.511 kb on - strand, within COO64_RS24340 at 79.511 kb on - strand, within COO64_RS24340 at 79.615 kb on + strand, within COO64_RS24340 at 79.615 kb on + strand, within COO64_RS24340 at 79.615 kb on + strand, within COO64_RS24340 at 79.616 kb on - strand, within COO64_RS24340 at 79.616 kb on - strand, within COO64_RS24340 at 79.664 kb on - strand, within COO64_RS24340 at 79.664 kb on - strand, within COO64_RS24340 at 79.762 kb on + strand, within COO64_RS24340 at 79.762 kb on + strand, within COO64_RS24340 at 79.762 kb on + strand, within COO64_RS24340 at 79.762 kb on + strand, within COO64_RS24340 at 79.763 kb on - strand, within COO64_RS24340 at 79.763 kb on - strand, within COO64_RS24340 at 79.763 kb on - strand, within COO64_RS24340 at 79.763 kb on - strand, within COO64_RS24340 at 79.763 kb on - strand, within COO64_RS24340 at 79.763 kb on - strand, within COO64_RS24340 at 79.763 kb on - strand, within COO64_RS24340 at 79.763 kb on - strand, within COO64_RS24340 at 79.763 kb on - strand, within COO64_RS24340 at 79.763 kb on - strand, within COO64_RS24340 at 79.763 kb on - strand, within COO64_RS24340 at 79.807 kb on + strand, within COO64_RS24340 at 79.859 kb on + strand, within COO64_RS24340 at 79.859 kb on + strand, within COO64_RS24340 at 79.876 kb on + strand, within COO64_RS24340 at 79.876 kb on + strand, within COO64_RS24340 at 79.876 kb on + strand, within COO64_RS24340 at 79.877 kb on - strand, within COO64_RS24340 at 79.879 kb on + strand, within COO64_RS24340 at 79.879 kb on + strand, within COO64_RS24340 at 79.879 kb on + strand, within COO64_RS24340 at 79.879 kb on + strand, within COO64_RS24340 at 79.880 kb on - strand, within COO64_RS24340 at 79.880 kb on - strand, within COO64_RS24340 at 79.880 kb on - strand, within COO64_RS24340 at 79.880 kb on - strand, within COO64_RS24340 at 79.880 kb on - strand, within COO64_RS24340 at 79.880 kb on - strand, within COO64_RS24340 at 79.884 kb on - strand, within COO64_RS24340 at 79.904 kb on - strand, within COO64_RS24340 at 79.996 kb on + strand, within COO64_RS24340 at 79.996 kb on + strand, within COO64_RS24340 at 79.997 kb on - strand, within COO64_RS24340
Per-strain Table
Position Strand Gene LocusTag Fraction supernatant control, M9 with 0.25X LB remove 76,657 - nuoM COO64_RS24325 0.39 +1.0 76,657 - nuoM COO64_RS24325 0.39 +1.4 76,686 + nuoM COO64_RS24325 0.41 -1.0 76,687 - nuoM COO64_RS24325 0.41 +0.2 76,728 + nuoM COO64_RS24325 0.43 -0.2 76,780 + nuoM COO64_RS24325 0.47 +1.6 76,781 - nuoM COO64_RS24325 0.47 +1.0 76,781 - nuoM COO64_RS24325 0.47 -0.2 76,850 + nuoM COO64_RS24325 0.51 -0.6 77,274 - nuoM COO64_RS24325 0.79 +1.0 77,500 - +1.0 77,827 + nuoN COO64_RS24330 0.15 +0.3 77,827 + nuoN COO64_RS24330 0.15 +0.4 77,827 + nuoN COO64_RS24330 0.15 -0.6 77,827 + nuoN COO64_RS24330 0.15 +1.0 77,828 - nuoN COO64_RS24330 0.15 +0.4 77,828 - nuoN COO64_RS24330 0.15 -1.0 77,828 - nuoN COO64_RS24330 0.15 +0.4 77,828 - nuoN COO64_RS24330 0.15 +2.0 77,828 - nuoN COO64_RS24330 0.15 -0.2 77,882 - nuoN COO64_RS24330 0.19 +0.6 77,882 - nuoN COO64_RS24330 0.19 -0.8 77,882 - nuoN COO64_RS24330 0.19 +0.6 77,929 + nuoN COO64_RS24330 0.22 +0.5 77,930 - nuoN COO64_RS24330 0.22 -0.5 77,930 - nuoN COO64_RS24330 0.22 -1.0 77,966 + nuoN COO64_RS24330 0.25 +1.0 77,967 - nuoN COO64_RS24330 0.25 -0.6 78,031 + nuoN COO64_RS24330 0.29 -0.4 78,031 + nuoN COO64_RS24330 0.29 -1.2 78,088 + nuoN COO64_RS24330 0.33 -0.0 78,088 + nuoN COO64_RS24330 0.33 -0.4 78,088 + nuoN COO64_RS24330 0.33 +0.7 78,088 + nuoN COO64_RS24330 0.33 +1.0 78,089 - nuoN COO64_RS24330 0.33 -0.6 78,089 - nuoN COO64_RS24330 0.33 +0.4 78,089 - nuoN COO64_RS24330 0.33 -0.4 78,592 + nuoN COO64_RS24330 0.67 -0.6 78,592 + nuoN COO64_RS24330 0.67 -0.5 78,593 - nuoN COO64_RS24330 0.67 +0.4 78,604 + nuoN COO64_RS24330 0.68 -0.4 78,605 - nuoN COO64_RS24330 0.68 +2.5 78,605 - nuoN COO64_RS24330 0.68 -0.4 78,605 - nuoN COO64_RS24330 0.68 +0.5 78,718 + nuoN COO64_RS24330 0.76 -0.4 78,796 + nuoN COO64_RS24330 0.81 -0.4 78,797 - nuoN COO64_RS24330 0.81 +2.0 78,797 - nuoN COO64_RS24330 0.81 +0.2 78,797 - nuoN COO64_RS24330 0.81 +0.1 78,877 + nuoN COO64_RS24330 0.87 +1.0 78,877 + nuoN COO64_RS24330 0.87 -0.0 78,878 - nuoN COO64_RS24330 0.87 +1.0 78,878 - nuoN COO64_RS24330 0.87 -0.4 78,880 + nuoN COO64_RS24330 0.87 -0.0 79,237 + -0.0 79,237 + -0.1 79,237 + +1.7 79,237 + -0.2 79,238 - -0.4 79,238 - +0.0 79,238 - +0.8 79,238 - +0.5 79,295 + -0.6 79,502 + COO64_RS24340 0.11 +0.6 79,502 + COO64_RS24340 0.11 +0.8 79,502 + COO64_RS24340 0.11 -0.6 79,503 - COO64_RS24340 0.11 +0.5 79,503 - COO64_RS24340 0.11 -1.3 79,503 - COO64_RS24340 0.11 -0.5 79,503 - COO64_RS24340 0.11 +0.3 79,511 - COO64_RS24340 0.11 +0.2 79,511 - COO64_RS24340 0.11 +0.4 79,511 - COO64_RS24340 0.11 -0.0 79,615 + COO64_RS24340 0.16 +0.1 79,615 + COO64_RS24340 0.16 -0.1 79,615 + COO64_RS24340 0.16 +0.6 79,616 - COO64_RS24340 0.16 +0.5 79,616 - COO64_RS24340 0.16 -0.7 79,664 - COO64_RS24340 0.19 +0.0 79,664 - COO64_RS24340 0.19 -1.0 79,762 + COO64_RS24340 0.23 +0.5 79,762 + COO64_RS24340 0.23 +0.5 79,762 + COO64_RS24340 0.23 +0.7 79,762 + COO64_RS24340 0.23 -0.4 79,763 - COO64_RS24340 0.23 +0.2 79,763 - COO64_RS24340 0.23 -0.3 79,763 - COO64_RS24340 0.23 -0.4 79,763 - COO64_RS24340 0.23 -0.6 79,763 - COO64_RS24340 0.23 -2.4 79,763 - COO64_RS24340 0.23 +1.2 79,763 - COO64_RS24340 0.23 -0.0 79,763 - COO64_RS24340 0.23 -0.1 79,763 - COO64_RS24340 0.23 -0.2 79,763 - COO64_RS24340 0.23 +0.5 79,763 - COO64_RS24340 0.23 -0.0 79,807 + COO64_RS24340 0.26 -0.3 79,859 + COO64_RS24340 0.28 +0.4 79,859 + COO64_RS24340 0.28 -0.0 79,876 + COO64_RS24340 0.29 -0.6 79,876 + COO64_RS24340 0.29 -0.1 79,876 + COO64_RS24340 0.29 +0.6 79,877 - COO64_RS24340 0.29 +0.2 79,879 + COO64_RS24340 0.29 +0.2 79,879 + COO64_RS24340 0.29 -0.0 79,879 + COO64_RS24340 0.29 +0.6 79,879 + COO64_RS24340 0.29 -0.7 79,880 - COO64_RS24340 0.29 +1.0 79,880 - COO64_RS24340 0.29 +0.7 79,880 - COO64_RS24340 0.29 +0.2 79,880 - COO64_RS24340 0.29 +0.1 79,880 - COO64_RS24340 0.29 -0.0 79,880 - COO64_RS24340 0.29 -0.2 79,884 - COO64_RS24340 0.29 +1.2 79,904 - COO64_RS24340 0.30 +0.6 79,996 + COO64_RS24340 0.35 +0.5 79,996 + COO64_RS24340 0.35 +0.4 79,997 - COO64_RS24340 0.35 +1.1
Or see this region's nucleotide sequence