Experiment: supernatant control, M9 with 0.25X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ctlX and COO64_RS19075 are separated by 210 nucleotides COO64_RS19075 and COO64_RS19080 are separated by 315 nucleotides
COO64_RS19070: ctlX - citrulline utilization hydrolase CtlX, at 136,403 to 137,320
ctlX
COO64_RS19075: COO64_RS19075 - ferredoxin, at 137,531 to 137,917
_RS19075
COO64_RS19080: COO64_RS19080 - sigma-54-dependent Fis family transcriptional regulator, at 138,233 to 140,041
_RS19080
Position (kb) 137
138 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 136.767 kb on + strand, within ctlX at 136.767 kb on + strand, within ctlX at 136.768 kb on - strand, within ctlX at 136.768 kb on - strand, within ctlX at 136.768 kb on - strand, within ctlX at 136.768 kb on - strand, within ctlX at 136.768 kb on - strand, within ctlX at 136.768 kb on - strand, within ctlX at 136.768 kb on - strand, within ctlX at 136.879 kb on - strand, within ctlX at 136.879 kb on - strand, within ctlX at 136.879 kb on - strand, within ctlX at 136.929 kb on + strand, within ctlX at 136.930 kb on - strand, within ctlX at 136.930 kb on - strand, within ctlX at 136.930 kb on - strand, within ctlX at 136.930 kb on - strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.933 kb on + strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 136.934 kb on - strand, within ctlX at 137.004 kb on - strand, within ctlX at 137.178 kb on + strand, within ctlX at 137.178 kb on + strand, within ctlX at 137.178 kb on + strand, within ctlX at 137.305 kb on + strand at 137.305 kb on + strand at 137.306 kb on - strand at 137.306 kb on - strand at 137.306 kb on - strand at 137.306 kb on - strand at 137.306 kb on - strand at 137.306 kb on - strand at 137.306 kb on - strand at 137.352 kb on + strand at 137.352 kb on + strand at 137.352 kb on + strand at 137.353 kb on - strand at 137.353 kb on - strand at 137.353 kb on - strand at 137.373 kb on + strand at 137.373 kb on + strand at 137.373 kb on + strand at 137.374 kb on - strand at 137.374 kb on - strand at 137.421 kb on - strand at 137.421 kb on - strand at 137.428 kb on + strand at 137.511 kb on + strand at 137.512 kb on - strand at 137.649 kb on + strand, within COO64_RS19075 at 137.650 kb on - strand, within COO64_RS19075 at 137.827 kb on + strand, within COO64_RS19075 at 138.011 kb on + strand at 138.011 kb on + strand at 138.011 kb on + strand at 138.012 kb on - strand at 138.288 kb on + strand at 138.288 kb on + strand at 138.289 kb on - strand at 138.289 kb on - strand at 138.334 kb on + strand at 138.379 kb on + strand at 138.379 kb on + strand at 138.379 kb on + strand at 138.681 kb on + strand, within COO64_RS19080 at 138.682 kb on - strand, within COO64_RS19080 at 138.682 kb on - strand, within COO64_RS19080 at 138.684 kb on + strand, within COO64_RS19080 at 138.685 kb on - strand, within COO64_RS19080 at 138.685 kb on - strand, within COO64_RS19080 at 138.713 kb on + strand, within COO64_RS19080 at 138.713 kb on + strand, within COO64_RS19080 at 138.713 kb on + strand, within COO64_RS19080 at 138.713 kb on + strand, within COO64_RS19080 at 138.714 kb on - strand, within COO64_RS19080 at 138.714 kb on - strand, within COO64_RS19080 at 138.714 kb on - strand, within COO64_RS19080 at 138.714 kb on - strand, within COO64_RS19080 at 138.714 kb on - strand, within COO64_RS19080
Per-strain Table
Position Strand Gene LocusTag Fraction supernatant control, M9 with 0.25X LB remove 136,767 + ctlX COO64_RS19070 0.40 +0.1 136,767 + ctlX COO64_RS19070 0.40 -1.0 136,768 - ctlX COO64_RS19070 0.40 +0.6 136,768 - ctlX COO64_RS19070 0.40 -0.3 136,768 - ctlX COO64_RS19070 0.40 -0.4 136,768 - ctlX COO64_RS19070 0.40 +0.0 136,768 - ctlX COO64_RS19070 0.40 +0.0 136,768 - ctlX COO64_RS19070 0.40 +0.2 136,768 - ctlX COO64_RS19070 0.40 -0.1 136,879 - ctlX COO64_RS19070 0.52 -0.6 136,879 - ctlX COO64_RS19070 0.52 +0.3 136,879 - ctlX COO64_RS19070 0.52 +0.7 136,929 + ctlX COO64_RS19070 0.57 -1.9 136,930 - ctlX COO64_RS19070 0.57 +0.4 136,930 - ctlX COO64_RS19070 0.57 -0.9 136,930 - ctlX COO64_RS19070 0.57 +0.1 136,930 - ctlX COO64_RS19070 0.57 -0.2 136,933 + ctlX COO64_RS19070 0.58 -0.3 136,933 + ctlX COO64_RS19070 0.58 -1.4 136,933 + ctlX COO64_RS19070 0.58 +0.0 136,933 + ctlX COO64_RS19070 0.58 -0.1 136,933 + ctlX COO64_RS19070 0.58 +0.0 136,933 + ctlX COO64_RS19070 0.58 -0.8 136,933 + ctlX COO64_RS19070 0.58 -0.1 136,933 + ctlX COO64_RS19070 0.58 -0.5 136,933 + ctlX COO64_RS19070 0.58 -0.5 136,933 + ctlX COO64_RS19070 0.58 -0.6 136,933 + ctlX COO64_RS19070 0.58 -0.6 136,933 + ctlX COO64_RS19070 0.58 -1.6 136,933 + ctlX COO64_RS19070 0.58 +0.2 136,933 + ctlX COO64_RS19070 0.58 -1.0 136,933 + ctlX COO64_RS19070 0.58 +1.9 136,933 + ctlX COO64_RS19070 0.58 -0.3 136,933 + ctlX COO64_RS19070 0.58 -0.5 136,934 - ctlX COO64_RS19070 0.58 -1.1 136,934 - ctlX COO64_RS19070 0.58 +0.4 136,934 - ctlX COO64_RS19070 0.58 -0.6 136,934 - ctlX COO64_RS19070 0.58 +0.8 136,934 - ctlX COO64_RS19070 0.58 +0.3 136,934 - ctlX COO64_RS19070 0.58 +1.6 136,934 - ctlX COO64_RS19070 0.58 -0.5 136,934 - ctlX COO64_RS19070 0.58 -1.8 136,934 - ctlX COO64_RS19070 0.58 -0.1 136,934 - ctlX COO64_RS19070 0.58 +0.8 136,934 - ctlX COO64_RS19070 0.58 +0.4 136,934 - ctlX COO64_RS19070 0.58 -0.4 136,934 - ctlX COO64_RS19070 0.58 +0.5 136,934 - ctlX COO64_RS19070 0.58 -0.9 136,934 - ctlX COO64_RS19070 0.58 -0.3 136,934 - ctlX COO64_RS19070 0.58 -0.2 136,934 - ctlX COO64_RS19070 0.58 +0.1 136,934 - ctlX COO64_RS19070 0.58 -0.3 137,004 - ctlX COO64_RS19070 0.65 +0.2 137,178 + ctlX COO64_RS19070 0.84 +0.7 137,178 + ctlX COO64_RS19070 0.84 +0.4 137,178 + ctlX COO64_RS19070 0.84 +0.9 137,305 + -1.1 137,305 + -0.3 137,306 - +1.1 137,306 - -0.3 137,306 - -1.4 137,306 - +0.4 137,306 - +0.4 137,306 - +0.1 137,306 - -0.4 137,352 + -1.4 137,352 + +0.2 137,352 + -1.6 137,353 - -0.1 137,353 - +0.8 137,353 - +0.8 137,373 + +0.4 137,373 + +0.1 137,373 + +0.3 137,374 - +3.3 137,374 - -0.1 137,421 - +0.2 137,421 - -0.3 137,428 + +0.1 137,511 + +0.4 137,512 - +0.8 137,649 + COO64_RS19075 0.30 -0.1 137,650 - COO64_RS19075 0.31 -0.9 137,827 + COO64_RS19075 0.76 -0.6 138,011 + +1.4 138,011 + +0.0 138,011 + -1.9 138,012 - -1.3 138,288 + +0.4 138,288 + -0.3 138,289 - +0.2 138,289 - +0.6 138,334 + +1.1 138,379 + +0.7 138,379 + -0.3 138,379 + -1.5 138,681 + COO64_RS19080 0.25 -1.1 138,682 - COO64_RS19080 0.25 -1.8 138,682 - COO64_RS19080 0.25 -1.0 138,684 + COO64_RS19080 0.25 +0.2 138,685 - COO64_RS19080 0.25 +0.9 138,685 - COO64_RS19080 0.25 +0.1 138,713 + COO64_RS19080 0.27 -0.5 138,713 + COO64_RS19080 0.27 +1.0 138,713 + COO64_RS19080 0.27 +3.5 138,713 + COO64_RS19080 0.27 -1.2 138,714 - COO64_RS19080 0.27 +0.1 138,714 - COO64_RS19080 0.27 +0.1 138,714 - COO64_RS19080 0.27 -0.5 138,714 - COO64_RS19080 0.27 -0.4 138,714 - COO64_RS19080 0.27 +0.5
Or see this region's nucleotide sequence