Experiment: supernatant control, M9 with 0.25X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt COO64_RS15945 and COO64_RS15950 overlap by 8 nucleotides COO64_RS15950 and COO64_RS15955 are separated by 295 nucleotides
COO64_RS15945: COO64_RS15945 - NAD-dependent epimerase/dehydratase family protein, at 203,082 to 204,011
_RS15945
COO64_RS15950: COO64_RS15950 - sugar nucleotide-binding protein, at 204,004 to 204,888
_RS15950
COO64_RS15955: COO64_RS15955 - TauD/TfdA family dioxygenase, at 205,184 to 206,227
_RS15955
Position (kb) 204
205 Strain fitness (log2 ratio) -2
-1
0
1 at 203.042 kb on + strand at 203.042 kb on + strand at 203.043 kb on - strand at 203.043 kb on - strand at 203.054 kb on + strand at 203.054 kb on + strand at 203.054 kb on + strand at 203.054 kb on + strand at 203.055 kb on - strand at 203.055 kb on - strand at 203.055 kb on - strand at 204.079 kb on - strand at 204.079 kb on - strand at 204.181 kb on - strand, within COO64_RS15950 at 204.181 kb on - strand, within COO64_RS15950 at 204.181 kb on - strand, within COO64_RS15950 at 204.252 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.258 kb on - strand, within COO64_RS15950 at 204.262 kb on - strand, within COO64_RS15950 at 204.549 kb on - strand, within COO64_RS15950 at 204.705 kb on - strand, within COO64_RS15950 at 204.708 kb on - strand, within COO64_RS15950 at 204.708 kb on - strand, within COO64_RS15950 at 204.889 kb on - strand at 204.889 kb on - strand at 204.889 kb on - strand at 204.889 kb on - strand at 204.913 kb on - strand at 204.913 kb on - strand at 204.913 kb on - strand at 205.005 kb on + strand at 205.005 kb on + strand at 205.006 kb on - strand at 205.016 kb on + strand at 205.016 kb on + strand at 205.016 kb on + strand at 205.017 kb on - strand at 205.017 kb on - strand at 205.017 kb on - strand at 205.017 kb on - strand at 205.037 kb on + strand at 205.037 kb on + strand at 205.037 kb on + strand at 205.037 kb on + strand at 205.037 kb on + strand at 205.038 kb on - strand at 205.040 kb on - strand at 205.040 kb on - strand at 205.040 kb on - strand at 205.040 kb on - strand at 205.040 kb on - strand at 205.040 kb on - strand at 205.040 kb on - strand at 205.040 kb on - strand at 205.055 kb on - strand at 205.088 kb on + strand at 205.088 kb on + strand at 205.088 kb on + strand at 205.088 kb on + strand at 205.088 kb on + strand at 205.089 kb on - strand at 205.089 kb on - strand at 205.089 kb on - strand at 205.089 kb on - strand at 205.089 kb on - strand at 205.092 kb on + strand at 205.092 kb on + strand at 205.092 kb on + strand at 205.092 kb on + strand at 205.092 kb on + strand at 205.092 kb on + strand at 205.092 kb on + strand at 205.092 kb on + strand at 205.093 kb on - strand at 205.093 kb on - strand at 205.093 kb on - strand at 205.093 kb on - strand at 205.093 kb on - strand at 205.093 kb on - strand at 205.093 kb on - strand at 205.093 kb on - strand at 205.093 kb on - strand at 205.097 kb on + strand at 205.097 kb on + strand at 205.098 kb on - strand at 205.156 kb on + strand at 205.157 kb on - strand at 205.206 kb on - strand at 205.206 kb on - strand at 205.206 kb on - strand at 205.256 kb on + strand at 205.257 kb on - strand at 205.257 kb on - strand at 205.257 kb on - strand at 205.333 kb on + strand, within COO64_RS15955 at 205.334 kb on - strand, within COO64_RS15955 at 205.487 kb on + strand, within COO64_RS15955 at 205.487 kb on + strand, within COO64_RS15955 at 205.488 kb on - strand, within COO64_RS15955 at 205.488 kb on - strand, within COO64_RS15955 at 205.488 kb on - strand, within COO64_RS15955 at 205.529 kb on + strand, within COO64_RS15955 at 205.530 kb on - strand, within COO64_RS15955 at 205.530 kb on - strand, within COO64_RS15955 at 205.585 kb on + strand, within COO64_RS15955 at 205.694 kb on + strand, within COO64_RS15955 at 205.694 kb on + strand, within COO64_RS15955
Per-strain Table
Position Strand Gene LocusTag Fraction supernatant control, M9 with 0.25X LB remove 203,042 + -0.0 203,042 + -0.6 203,043 - -0.6 203,043 - +1.6 203,054 + -0.7 203,054 + -0.7 203,054 + +0.5 203,054 + +0.0 203,055 - +0.4 203,055 - +0.5 203,055 - -0.7 204,079 - -0.8 204,079 - -0.7 204,181 - COO64_RS15950 0.20 +0.2 204,181 - COO64_RS15950 0.20 -0.9 204,181 - COO64_RS15950 0.20 -0.7 204,252 - COO64_RS15950 0.28 -1.9 204,258 - COO64_RS15950 0.29 -0.6 204,258 - COO64_RS15950 0.29 -0.8 204,258 - COO64_RS15950 0.29 +0.4 204,258 - COO64_RS15950 0.29 +0.5 204,258 - COO64_RS15950 0.29 +0.2 204,258 - COO64_RS15950 0.29 +0.1 204,258 - COO64_RS15950 0.29 -1.0 204,258 - COO64_RS15950 0.29 -1.3 204,258 - COO64_RS15950 0.29 +1.4 204,258 - COO64_RS15950 0.29 -0.2 204,258 - COO64_RS15950 0.29 -0.9 204,258 - COO64_RS15950 0.29 -0.7 204,258 - COO64_RS15950 0.29 -0.8 204,258 - COO64_RS15950 0.29 -0.8 204,258 - COO64_RS15950 0.29 -0.2 204,258 - COO64_RS15950 0.29 -1.9 204,258 - COO64_RS15950 0.29 -0.1 204,262 - COO64_RS15950 0.29 -0.9 204,549 - COO64_RS15950 0.62 +0.4 204,705 - COO64_RS15950 0.79 +0.0 204,708 - COO64_RS15950 0.80 -0.8 204,708 - COO64_RS15950 0.80 -0.6 204,889 - -0.6 204,889 - -0.4 204,889 - +0.4 204,889 - -0.2 204,913 - -2.0 204,913 - +1.0 204,913 - -0.9 205,005 + +0.8 205,005 + +0.2 205,006 - -0.4 205,016 + -0.3 205,016 + +0.2 205,016 + -1.2 205,017 - +0.4 205,017 - -0.3 205,017 - -0.2 205,017 - -0.3 205,037 + -0.2 205,037 + +0.3 205,037 + -0.3 205,037 + +0.6 205,037 + -0.2 205,038 - -0.2 205,040 - +0.4 205,040 - +1.2 205,040 - -0.4 205,040 - +1.0 205,040 - +0.4 205,040 - -0.2 205,040 - +0.4 205,040 - +1.0 205,055 - +1.0 205,088 + -0.9 205,088 + -2.1 205,088 + -1.2 205,088 + -0.6 205,088 + -0.2 205,089 - -0.6 205,089 - +1.0 205,089 - +0.1 205,089 - +0.4 205,089 - -0.4 205,092 + +0.2 205,092 + -0.0 205,092 + -1.4 205,092 + +1.3 205,092 + +0.7 205,092 + +0.8 205,092 + -0.4 205,092 + +0.5 205,093 - -0.1 205,093 - -0.6 205,093 - +0.5 205,093 - +0.6 205,093 - +0.3 205,093 - +0.1 205,093 - +0.4 205,093 - +1.3 205,093 - -0.3 205,097 + -1.6 205,097 + -0.0 205,098 - -0.6 205,156 + -0.7 205,157 - -1.5 205,206 - -0.5 205,206 - -0.3 205,206 - +0.3 205,256 + -0.3 205,257 - -0.4 205,257 - -0.1 205,257 - -0.4 205,333 + COO64_RS15955 0.14 +0.6 205,334 - COO64_RS15955 0.14 +0.4 205,487 + COO64_RS15955 0.29 +0.8 205,487 + COO64_RS15955 0.29 -0.7 205,488 - COO64_RS15955 0.29 -1.0 205,488 - COO64_RS15955 0.29 +0.4 205,488 - COO64_RS15955 0.29 +0.1 205,529 + COO64_RS15955 0.33 +1.0 205,530 - COO64_RS15955 0.33 +0.5 205,530 - COO64_RS15955 0.33 -1.1 205,585 + COO64_RS15955 0.38 -0.7 205,694 + COO64_RS15955 0.49 -0.1 205,694 + COO64_RS15955 0.49 -0.5
Or see this region's nucleotide sequence