Experiment: supernatant control, M9 with 0.25X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt COO64_RS13510 and ubiE overlap by 1 nucleotides ubiE and COO64_RS13520 are separated by 124 nucleotides COO64_RS13520 and COO64_RS13525 are separated by 219 nucleotides COO64_RS13525 and COO64_RS13530 are separated by 10 nucleotides
COO64_RS13510: COO64_RS13510 - SCP2 domain-containing protein, at 255,172 to 255,795
_RS13510
COO64_RS13515: ubiE - bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE, at 255,795 to 256,565
ubiE
COO64_RS13520: COO64_RS13520 - polyhydroxyalkanoic acid system family protein, at 256,690 to 256,965
_RS13520
COO64_RS13525: COO64_RS13525 - phasin family protein, at 257,185 to 257,604
_RS13525
COO64_RS13530: COO64_RS13530 - phasin family protein, at 257,615 to 258,376
_RS13530
Position (kb) 256
257 Strain fitness (log2 ratio) -2
-1
0
1
2 at 256.598 kb on + strand at 256.605 kb on + strand at 256.606 kb on - strand at 256.606 kb on - strand at 256.606 kb on - strand at 256.654 kb on + strand at 256.654 kb on + strand at 256.655 kb on - strand at 256.655 kb on - strand at 256.657 kb on + strand at 256.657 kb on + strand at 256.657 kb on + strand at 256.657 kb on + strand at 256.657 kb on + strand at 256.657 kb on + strand at 256.657 kb on + strand at 256.657 kb on + strand at 256.657 kb on + strand at 256.657 kb on + strand at 256.657 kb on + strand at 256.657 kb on + strand at 256.658 kb on - strand at 256.658 kb on - strand at 256.658 kb on - strand at 256.658 kb on - strand at 256.658 kb on - strand at 256.658 kb on - strand at 256.658 kb on - strand at 256.658 kb on - strand at 256.658 kb on - strand at 256.658 kb on - strand at 256.658 kb on - strand at 256.658 kb on - strand at 256.658 kb on - strand at 256.658 kb on - strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.659 kb on + strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.660 kb on - strand at 256.663 kb on + strand at 256.663 kb on + strand at 256.663 kb on + strand at 256.664 kb on - strand at 256.664 kb on - strand at 256.664 kb on - strand at 256.664 kb on - strand at 256.664 kb on - strand at 256.664 kb on - strand at 256.664 kb on - strand at 256.783 kb on + strand, within COO64_RS13520 at 256.783 kb on + strand, within COO64_RS13520 at 256.784 kb on - strand, within COO64_RS13520 at 256.784 kb on - strand, within COO64_RS13520 at 256.950 kb on + strand at 257.086 kb on + strand at 257.086 kb on + strand at 257.087 kb on - strand at 257.087 kb on - strand at 257.087 kb on - strand at 257.087 kb on - strand at 257.087 kb on - strand at 257.089 kb on + strand at 257.089 kb on + strand at 257.089 kb on + strand at 257.089 kb on + strand at 257.089 kb on + strand at 257.090 kb on - strand at 257.090 kb on - strand at 257.090 kb on - strand at 257.090 kb on - strand at 257.090 kb on - strand at 257.090 kb on - strand at 257.090 kb on - strand at 257.117 kb on - strand at 257.284 kb on + strand, within COO64_RS13525 at 257.285 kb on - strand, within COO64_RS13525 at 257.314 kb on + strand, within COO64_RS13525 at 257.315 kb on - strand, within COO64_RS13525 at 257.320 kb on - strand, within COO64_RS13525 at 257.320 kb on - strand, within COO64_RS13525 at 257.595 kb on + strand at 257.595 kb on + strand at 257.595 kb on + strand at 257.595 kb on + strand at 257.596 kb on - strand at 257.596 kb on - strand at 257.596 kb on - strand at 257.596 kb on - strand at 257.596 kb on - strand at 257.596 kb on - strand at 257.602 kb on + strand at 257.602 kb on + strand at 257.603 kb on - strand at 257.603 kb on - strand at 257.632 kb on + strand at 257.632 kb on + strand at 257.632 kb on + strand at 257.632 kb on + strand at 257.633 kb on - strand at 257.676 kb on - strand at 257.707 kb on + strand, within COO64_RS13530 at 257.707 kb on + strand, within COO64_RS13530 at 257.708 kb on - strand, within COO64_RS13530 at 257.708 kb on - strand, within COO64_RS13530 at 257.711 kb on + strand, within COO64_RS13530 at 257.711 kb on + strand, within COO64_RS13530 at 257.711 kb on + strand, within COO64_RS13530 at 257.712 kb on - strand, within COO64_RS13530 at 257.712 kb on - strand, within COO64_RS13530 at 257.712 kb on - strand, within COO64_RS13530 at 257.712 kb on - strand, within COO64_RS13530 at 257.712 kb on - strand, within COO64_RS13530 at 257.785 kb on - strand, within COO64_RS13530 at 257.846 kb on - strand, within COO64_RS13530 at 257.846 kb on - strand, within COO64_RS13530
Per-strain Table
Position Strand Gene LocusTag Fraction supernatant control, M9 with 0.25X LB remove 256,598 + -1.5 256,605 + -2.2 256,606 - +0.7 256,606 - +0.1 256,606 - -0.8 256,654 + -0.1 256,654 + -0.5 256,655 - +1.2 256,655 - +0.6 256,657 + +0.2 256,657 + -1.1 256,657 + -0.3 256,657 + +0.7 256,657 + -0.6 256,657 + +1.1 256,657 + -0.8 256,657 + -1.3 256,657 + +0.9 256,657 + -1.5 256,657 + -1.3 256,657 + -0.8 256,658 - -0.5 256,658 - -0.9 256,658 - -0.6 256,658 - +0.2 256,658 - -0.3 256,658 - +1.1 256,658 - +1.2 256,658 - -0.6 256,658 - -0.3 256,658 - +0.2 256,658 - -1.5 256,658 - +0.8 256,658 - +1.3 256,658 - -0.2 256,659 + +1.2 256,659 + +1.4 256,659 + -0.3 256,659 + -0.6 256,659 + -1.0 256,659 + +0.1 256,659 + +0.5 256,659 + -0.1 256,659 + -0.2 256,659 + -0.3 256,659 + -0.9 256,659 + -0.6 256,659 + +0.3 256,659 + -1.1 256,659 + -0.8 256,659 + -0.2 256,659 + -0.1 256,659 + -0.5 256,659 + -1.0 256,659 + -0.0 256,659 + -0.2 256,659 + -0.0 256,659 + +0.6 256,659 + -0.0 256,659 + -0.7 256,659 + -1.0 256,659 + -0.6 256,659 + +1.0 256,659 + +0.2 256,659 + +0.4 256,660 - -0.7 256,660 - -1.5 256,660 - -0.3 256,660 - +0.4 256,660 - -1.1 256,660 - -0.8 256,660 - -0.4 256,660 - +0.9 256,660 - -0.6 256,660 - +0.4 256,660 - -0.5 256,660 - +0.6 256,660 - -0.3 256,660 - +0.1 256,660 - -0.9 256,660 - +0.7 256,660 - -1.3 256,660 - -0.3 256,660 - -0.5 256,660 - -0.0 256,660 - +0.6 256,660 - +0.3 256,660 - -0.3 256,660 - +0.2 256,660 - +0.8 256,660 - +1.0 256,660 - +2.0 256,660 - -0.2 256,663 + -0.2 256,663 + -1.0 256,663 + +0.5 256,664 - -0.3 256,664 - +0.1 256,664 - -0.8 256,664 - +0.5 256,664 - +0.7 256,664 - +1.0 256,664 - -0.9 256,783 + COO64_RS13520 0.34 +0.7 256,783 + COO64_RS13520 0.34 -0.3 256,784 - COO64_RS13520 0.34 -1.3 256,784 - COO64_RS13520 0.34 -1.8 256,950 + +0.9 257,086 + -0.9 257,086 + +0.7 257,087 - -0.7 257,087 - -0.3 257,087 - -0.1 257,087 - -1.0 257,087 - -1.2 257,089 + -0.7 257,089 + +1.7 257,089 + +1.0 257,089 + -0.4 257,089 + -0.0 257,090 - -0.8 257,090 - -0.2 257,090 - -0.3 257,090 - +0.5 257,090 - -0.0 257,090 - -1.8 257,090 - +0.3 257,117 - +1.3 257,284 + COO64_RS13525 0.24 +0.6 257,285 - COO64_RS13525 0.24 -0.7 257,314 + COO64_RS13525 0.31 -0.5 257,315 - COO64_RS13525 0.31 +0.3 257,320 - COO64_RS13525 0.32 -1.0 257,320 - COO64_RS13525 0.32 -0.6 257,595 + -0.3 257,595 + +0.8 257,595 + +1.6 257,595 + -0.1 257,596 - +2.0 257,596 - +0.4 257,596 - -0.5 257,596 - +0.6 257,596 - -0.1 257,596 - +1.0 257,602 + +0.4 257,602 + +0.5 257,603 - -0.2 257,603 - -0.8 257,632 + -0.9 257,632 + +0.3 257,632 + +1.3 257,632 + -0.0 257,633 - -1.0 257,676 - -1.0 257,707 + COO64_RS13530 0.12 +0.4 257,707 + COO64_RS13530 0.12 -1.7 257,708 - COO64_RS13530 0.12 +0.6 257,708 - COO64_RS13530 0.12 +0.1 257,711 + COO64_RS13530 0.13 -0.2 257,711 + COO64_RS13530 0.13 -0.2 257,711 + COO64_RS13530 0.13 +1.0 257,712 - COO64_RS13530 0.13 -0.2 257,712 - COO64_RS13530 0.13 -1.6 257,712 - COO64_RS13530 0.13 -0.8 257,712 - COO64_RS13530 0.13 +0.4 257,712 - COO64_RS13530 0.13 +1.4 257,785 - COO64_RS13530 0.22 +1.1 257,846 - COO64_RS13530 0.30 +0.1 257,846 - COO64_RS13530 0.30 -1.1
Or see this region's nucleotide sequence