Experiment: supernatant control, M9 with 0.25X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt COO64_RS13040 and COO64_RS13045 are separated by 179 nucleotides COO64_RS13045 and COO64_RS13050 are separated by 170 nucleotides
COO64_RS13040: COO64_RS13040 - thermonuclease family protein, at 147,564 to 148,385
_RS13040
COO64_RS13045: COO64_RS13045 - malic enzyme-like NAD(P)-binding protein, at 148,565 to 149,833
_RS13045
COO64_RS13050: COO64_RS13050 - penicillin-binding protein 1A, at 150,004 to 152,457
_RS13050
Position (kb) 148
149
150 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 147.726 kb on - strand, within COO64_RS13040 at 147.726 kb on - strand, within COO64_RS13040 at 147.767 kb on + strand, within COO64_RS13040 at 147.768 kb on - strand, within COO64_RS13040 at 147.907 kb on - strand, within COO64_RS13040 at 147.907 kb on - strand, within COO64_RS13040 at 147.930 kb on + strand, within COO64_RS13040 at 148.129 kb on + strand, within COO64_RS13040 at 148.129 kb on + strand, within COO64_RS13040 at 148.129 kb on + strand, within COO64_RS13040 at 148.129 kb on + strand, within COO64_RS13040 at 148.130 kb on - strand, within COO64_RS13040 at 148.130 kb on - strand, within COO64_RS13040 at 148.130 kb on - strand, within COO64_RS13040 at 148.130 kb on - strand, within COO64_RS13040 at 148.130 kb on - strand, within COO64_RS13040 at 148.384 kb on - strand at 148.417 kb on - strand at 148.466 kb on + strand at 148.520 kb on + strand at 148.545 kb on + strand at 148.545 kb on + strand at 148.545 kb on + strand at 148.545 kb on + strand at 148.545 kb on + strand at 148.545 kb on + strand at 148.545 kb on + strand at 148.545 kb on + strand at 148.546 kb on - strand at 148.546 kb on - strand at 148.546 kb on - strand at 148.546 kb on - strand at 148.546 kb on - strand at 148.546 kb on - strand at 148.546 kb on - strand at 148.546 kb on - strand at 148.546 kb on - strand at 148.546 kb on - strand at 148.546 kb on - strand at 148.550 kb on - strand at 148.550 kb on - strand at 148.595 kb on + strand at 148.596 kb on - strand at 148.646 kb on - strand at 148.677 kb on - strand at 148.701 kb on + strand, within COO64_RS13045 at 148.733 kb on + strand, within COO64_RS13045 at 148.733 kb on + strand, within COO64_RS13045 at 148.733 kb on + strand, within COO64_RS13045 at 148.734 kb on - strand, within COO64_RS13045 at 148.739 kb on + strand, within COO64_RS13045 at 148.739 kb on + strand, within COO64_RS13045 at 148.739 kb on + strand, within COO64_RS13045 at 148.739 kb on + strand, within COO64_RS13045 at 148.740 kb on - strand, within COO64_RS13045 at 148.740 kb on - strand, within COO64_RS13045 at 148.740 kb on - strand, within COO64_RS13045 at 148.936 kb on + strand, within COO64_RS13045 at 148.936 kb on + strand, within COO64_RS13045 at 148.936 kb on + strand, within COO64_RS13045 at 148.936 kb on + strand, within COO64_RS13045 at 148.936 kb on + strand, within COO64_RS13045 at 148.937 kb on - strand, within COO64_RS13045 at 148.937 kb on - strand, within COO64_RS13045 at 149.265 kb on - strand, within COO64_RS13045 at 149.265 kb on - strand, within COO64_RS13045 at 149.517 kb on + strand, within COO64_RS13045 at 149.517 kb on + strand, within COO64_RS13045 at 149.518 kb on - strand, within COO64_RS13045 at 149.518 kb on - strand, within COO64_RS13045 at 149.518 kb on - strand, within COO64_RS13045 at 149.654 kb on + strand, within COO64_RS13045 at 149.687 kb on + strand, within COO64_RS13045 at 149.687 kb on + strand, within COO64_RS13045 at 149.687 kb on + strand, within COO64_RS13045 at 149.687 kb on + strand, within COO64_RS13045 at 149.687 kb on + strand, within COO64_RS13045 at 149.687 kb on + strand, within COO64_RS13045 at 149.687 kb on + strand, within COO64_RS13045 at 149.687 kb on + strand, within COO64_RS13045 at 149.687 kb on + strand, within COO64_RS13045 at 149.687 kb on + strand, within COO64_RS13045 at 149.687 kb on + strand, within COO64_RS13045 at 149.687 kb on + strand, within COO64_RS13045 at 149.688 kb on - strand, within COO64_RS13045 at 149.688 kb on - strand, within COO64_RS13045 at 149.688 kb on - strand, within COO64_RS13045 at 149.688 kb on - strand, within COO64_RS13045 at 149.688 kb on - strand, within COO64_RS13045 at 149.688 kb on - strand, within COO64_RS13045 at 149.688 kb on - strand, within COO64_RS13045 at 149.795 kb on + strand at 149.795 kb on + strand at 149.795 kb on + strand at 149.796 kb on - strand at 149.796 kb on - strand at 149.796 kb on - strand at 149.832 kb on - strand at 149.841 kb on + strand at 149.841 kb on + strand at 149.841 kb on + strand at 149.841 kb on + strand at 149.842 kb on - strand at 149.842 kb on - strand at 149.842 kb on - strand at 149.842 kb on - strand at 149.842 kb on - strand at 149.849 kb on + strand at 149.849 kb on + strand at 149.850 kb on - strand at 149.850 kb on - strand at 150.120 kb on - strand at 150.120 kb on - strand at 150.120 kb on - strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.239 kb on + strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.240 kb on - strand at 150.333 kb on - strand, within COO64_RS13050 at 150.333 kb on - strand, within COO64_RS13050 at 150.342 kb on + strand, within COO64_RS13050 at 150.343 kb on - strand, within COO64_RS13050 at 150.344 kb on + strand, within COO64_RS13050 at 150.345 kb on - strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.476 kb on + strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.477 kb on - strand, within COO64_RS13050 at 150.480 kb on + strand, within COO64_RS13050 at 150.481 kb on - strand, within COO64_RS13050 at 150.481 kb on - strand, within COO64_RS13050 at 150.481 kb on - strand, within COO64_RS13050 at 150.481 kb on - strand, within COO64_RS13050 at 150.481 kb on - strand, within COO64_RS13050 at 150.481 kb on - strand, within COO64_RS13050 at 150.702 kb on - strand, within COO64_RS13050 at 150.702 kb on - strand, within COO64_RS13050 at 150.702 kb on - strand, within COO64_RS13050 at 150.716 kb on + strand, within COO64_RS13050 at 150.717 kb on - strand, within COO64_RS13050 at 150.717 kb on - strand, within COO64_RS13050
Per-strain Table
Position Strand Gene LocusTag Fraction supernatant control, M9 with 0.25X LB remove 147,726 - COO64_RS13040 0.20 +0.5 147,726 - COO64_RS13040 0.20 -2.5 147,767 + COO64_RS13040 0.25 -1.0 147,768 - COO64_RS13040 0.25 -0.2 147,907 - COO64_RS13040 0.42 -0.7 147,907 - COO64_RS13040 0.42 -1.2 147,930 + COO64_RS13040 0.45 +0.2 148,129 + COO64_RS13040 0.69 +0.2 148,129 + COO64_RS13040 0.69 -1.1 148,129 + COO64_RS13040 0.69 +0.5 148,129 + COO64_RS13040 0.69 -1.0 148,130 - COO64_RS13040 0.69 -0.5 148,130 - COO64_RS13040 0.69 -1.3 148,130 - COO64_RS13040 0.69 +1.2 148,130 - COO64_RS13040 0.69 -0.2 148,130 - COO64_RS13040 0.69 -0.9 148,384 - -1.0 148,417 - -0.3 148,466 + -1.7 148,520 + -0.1 148,545 + +0.0 148,545 + +0.1 148,545 + -0.2 148,545 + -0.8 148,545 + -0.6 148,545 + +0.6 148,545 + +0.9 148,545 + +0.7 148,546 - -1.0 148,546 - -0.5 148,546 - +0.0 148,546 - -1.3 148,546 - -0.5 148,546 - -1.4 148,546 - -1.6 148,546 - -2.0 148,546 - -1.8 148,546 - +0.1 148,546 - -0.7 148,550 - -1.5 148,550 - -1.3 148,595 + -1.3 148,596 - -0.5 148,646 - -2.7 148,677 - -0.8 148,701 + COO64_RS13045 0.11 -2.8 148,733 + COO64_RS13045 0.13 -1.5 148,733 + COO64_RS13045 0.13 -0.3 148,733 + COO64_RS13045 0.13 -2.0 148,734 - COO64_RS13045 0.13 -0.8 148,739 + COO64_RS13045 0.14 -1.2 148,739 + COO64_RS13045 0.14 -1.4 148,739 + COO64_RS13045 0.14 -1.1 148,739 + COO64_RS13045 0.14 -1.3 148,740 - COO64_RS13045 0.14 -1.4 148,740 - COO64_RS13045 0.14 -1.0 148,740 - COO64_RS13045 0.14 +0.8 148,936 + COO64_RS13045 0.29 -1.1 148,936 + COO64_RS13045 0.29 -1.3 148,936 + COO64_RS13045 0.29 -1.3 148,936 + COO64_RS13045 0.29 -0.3 148,936 + COO64_RS13045 0.29 -0.8 148,937 - COO64_RS13045 0.29 -1.0 148,937 - COO64_RS13045 0.29 -0.8 149,265 - COO64_RS13045 0.55 -1.4 149,265 - COO64_RS13045 0.55 -2.2 149,517 + COO64_RS13045 0.75 -0.4 149,517 + COO64_RS13045 0.75 -1.7 149,518 - COO64_RS13045 0.75 -0.3 149,518 - COO64_RS13045 0.75 -1.5 149,518 - COO64_RS13045 0.75 -0.8 149,654 + COO64_RS13045 0.86 -3.7 149,687 + COO64_RS13045 0.88 -0.7 149,687 + COO64_RS13045 0.88 -1.4 149,687 + COO64_RS13045 0.88 -0.2 149,687 + COO64_RS13045 0.88 -2.4 149,687 + COO64_RS13045 0.88 -1.1 149,687 + COO64_RS13045 0.88 -1.8 149,687 + COO64_RS13045 0.88 -3.1 149,687 + COO64_RS13045 0.88 +0.2 149,687 + COO64_RS13045 0.88 -1.0 149,687 + COO64_RS13045 0.88 -1.1 149,687 + COO64_RS13045 0.88 -1.0 149,687 + COO64_RS13045 0.88 -0.1 149,688 - COO64_RS13045 0.88 -1.8 149,688 - COO64_RS13045 0.88 -1.9 149,688 - COO64_RS13045 0.88 -0.9 149,688 - COO64_RS13045 0.88 +1.5 149,688 - COO64_RS13045 0.88 -0.3 149,688 - COO64_RS13045 0.88 -1.0 149,688 - COO64_RS13045 0.88 -1.7 149,795 + -0.1 149,795 + +0.3 149,795 + +0.5 149,796 - -0.8 149,796 - -0.4 149,796 - -0.4 149,832 - -1.0 149,841 + -0.3 149,841 + +0.8 149,841 + -0.1 149,841 + -0.7 149,842 - -0.2 149,842 - -0.9 149,842 - -0.8 149,842 - -0.5 149,842 - -0.5 149,849 + +0.7 149,849 + -1.0 149,850 - -0.1 149,850 - +0.6 150,120 - +0.3 150,120 - +0.7 150,120 - +1.0 150,239 + -0.1 150,239 + -0.1 150,239 + +0.4 150,239 + +0.2 150,239 + +0.7 150,239 + +0.3 150,239 + +0.0 150,239 + +0.9 150,239 + -1.0 150,239 + -0.8 150,239 + +0.6 150,239 + -0.1 150,239 + -0.3 150,240 - -0.2 150,240 - +0.8 150,240 - +0.5 150,240 - +0.5 150,240 - +1.2 150,240 - +0.7 150,240 - +0.4 150,240 - -1.0 150,240 - -0.8 150,240 - +0.8 150,240 - +0.3 150,240 - +0.8 150,240 - +1.5 150,240 - -0.5 150,240 - +0.7 150,240 - +0.4 150,333 - COO64_RS13050 0.13 +0.7 150,333 - COO64_RS13050 0.13 +0.9 150,342 + COO64_RS13050 0.14 +0.2 150,343 - COO64_RS13050 0.14 -1.1 150,344 + COO64_RS13050 0.14 -0.7 150,345 - COO64_RS13050 0.14 +0.5 150,476 + COO64_RS13050 0.19 -0.9 150,476 + COO64_RS13050 0.19 +0.6 150,476 + COO64_RS13050 0.19 -0.2 150,476 + COO64_RS13050 0.19 -0.2 150,476 + COO64_RS13050 0.19 -0.2 150,476 + COO64_RS13050 0.19 +1.3 150,476 + COO64_RS13050 0.19 +0.7 150,476 + COO64_RS13050 0.19 -0.2 150,476 + COO64_RS13050 0.19 +0.1 150,476 + COO64_RS13050 0.19 +0.6 150,476 + COO64_RS13050 0.19 -0.9 150,476 + COO64_RS13050 0.19 -0.1 150,476 + COO64_RS13050 0.19 +1.2 150,476 + COO64_RS13050 0.19 +0.3 150,476 + COO64_RS13050 0.19 +0.7 150,476 + COO64_RS13050 0.19 -0.3 150,476 + COO64_RS13050 0.19 +0.2 150,476 + COO64_RS13050 0.19 +0.2 150,476 + COO64_RS13050 0.19 -1.5 150,476 + COO64_RS13050 0.19 +1.3 150,477 - COO64_RS13050 0.19 +0.2 150,477 - COO64_RS13050 0.19 +0.8 150,477 - COO64_RS13050 0.19 +0.1 150,477 - COO64_RS13050 0.19 +0.3 150,477 - COO64_RS13050 0.19 +0.8 150,477 - COO64_RS13050 0.19 +0.6 150,477 - COO64_RS13050 0.19 +0.1 150,477 - COO64_RS13050 0.19 +0.4 150,477 - COO64_RS13050 0.19 +0.2 150,477 - COO64_RS13050 0.19 -1.1 150,477 - COO64_RS13050 0.19 +1.4 150,477 - COO64_RS13050 0.19 -0.7 150,477 - COO64_RS13050 0.19 -0.4 150,477 - COO64_RS13050 0.19 +0.4 150,477 - COO64_RS13050 0.19 +0.4 150,477 - COO64_RS13050 0.19 -1.8 150,477 - COO64_RS13050 0.19 +1.5 150,480 + COO64_RS13050 0.19 -0.9 150,481 - COO64_RS13050 0.19 -0.9 150,481 - COO64_RS13050 0.19 +0.5 150,481 - COO64_RS13050 0.19 +0.5 150,481 - COO64_RS13050 0.19 +0.3 150,481 - COO64_RS13050 0.19 -0.3 150,481 - COO64_RS13050 0.19 +1.3 150,702 - COO64_RS13050 0.28 +1.5 150,702 - COO64_RS13050 0.28 +0.0 150,702 - COO64_RS13050 0.28 -0.2 150,716 + COO64_RS13050 0.29 +0.8 150,717 - COO64_RS13050 0.29 -0.3 150,717 - COO64_RS13050 0.29 +0.4
Or see this region's nucleotide sequence