Experiment: supernatant control, M9 with 0.25X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt COO64_RS07290 and purM are separated by 345 nucleotides purM and purN overlap by 1 nucleotides purN and COO64_RS07305 are separated by 8 nucleotides
COO64_RS07290: COO64_RS07290 - DUF2066 domain-containing protein, at 971,782 to 972,831
_RS07290
COO64_RS07295: purM - phosphoribosylformylglycinamidine cyclo-ligase, at 973,177 to 974,235
purM
COO64_RS07300: purN - phosphoribosylglycinamide formyltransferase, at 974,235 to 974,888
purN
COO64_RS07305: COO64_RS07305 - DUF3108 domain-containing protein, at 974,897 to 975,607
_RS07305
Position (kb) 973
974
975 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 972.204 kb on + strand, within COO64_RS07290 at 972.204 kb on + strand, within COO64_RS07290 at 972.204 kb on + strand, within COO64_RS07290 at 972.204 kb on + strand, within COO64_RS07290 at 972.204 kb on + strand, within COO64_RS07290 at 972.204 kb on + strand, within COO64_RS07290 at 972.204 kb on + strand, within COO64_RS07290 at 972.205 kb on - strand, within COO64_RS07290 at 972.205 kb on - strand, within COO64_RS07290 at 972.750 kb on - strand at 972.750 kb on - strand at 972.815 kb on + strand at 972.815 kb on + strand at 972.815 kb on + strand at 972.815 kb on + strand at 972.815 kb on + strand at 972.816 kb on - strand at 972.816 kb on - strand at 972.816 kb on - strand at 972.816 kb on - strand at 972.819 kb on + strand at 972.819 kb on + strand at 972.819 kb on + strand at 972.820 kb on - strand at 972.820 kb on - strand at 972.820 kb on - strand at 972.820 kb on - strand at 972.820 kb on - strand at 972.820 kb on - strand at 972.820 kb on - strand at 972.853 kb on + strand at 972.854 kb on - strand at 972.854 kb on - strand at 972.926 kb on + strand at 972.927 kb on - strand at 972.927 kb on - strand at 972.927 kb on - strand at 972.949 kb on + strand at 972.949 kb on + strand at 972.949 kb on + strand at 972.949 kb on + strand at 972.949 kb on + strand at 972.949 kb on + strand at 972.949 kb on + strand at 972.950 kb on - strand at 972.950 kb on - strand at 972.950 kb on - strand at 972.950 kb on - strand at 972.950 kb on - strand at 972.950 kb on - strand at 972.950 kb on - strand at 972.950 kb on - strand at 972.950 kb on - strand at 972.950 kb on - strand at 972.950 kb on - strand at 972.951 kb on + strand at 972.951 kb on + strand at 972.951 kb on + strand at 972.951 kb on + strand at 972.952 kb on - strand at 972.952 kb on - strand at 972.952 kb on - strand at 972.952 kb on - strand at 972.952 kb on - strand at 972.952 kb on - strand at 972.952 kb on - strand at 972.952 kb on - strand at 972.952 kb on - strand at 972.956 kb on + strand at 972.956 kb on + strand at 972.956 kb on + strand at 972.956 kb on + strand at 972.957 kb on - strand at 972.957 kb on - strand at 972.957 kb on - strand at 972.957 kb on - strand at 972.957 kb on - strand at 972.957 kb on - strand at 972.958 kb on + strand at 972.958 kb on + strand at 972.958 kb on + strand at 972.958 kb on + strand at 972.958 kb on + strand at 972.958 kb on + strand at 972.958 kb on + strand at 972.958 kb on + strand at 972.958 kb on + strand at 972.958 kb on + strand at 972.958 kb on + strand at 972.959 kb on - strand at 972.959 kb on - strand at 972.959 kb on - strand at 972.959 kb on - strand at 972.959 kb on - strand at 972.959 kb on - strand at 972.959 kb on - strand at 972.959 kb on - strand at 972.993 kb on + strand at 972.993 kb on + strand at 972.993 kb on + strand at 972.993 kb on + strand at 972.994 kb on - strand at 973.001 kb on - strand at 973.014 kb on + strand at 973.014 kb on + strand at 973.014 kb on + strand at 973.015 kb on - strand at 973.015 kb on - strand at 973.017 kb on + strand at 973.017 kb on + strand at 973.017 kb on + strand at 973.017 kb on + strand at 973.018 kb on - strand at 973.018 kb on - strand at 973.018 kb on - strand at 973.018 kb on - strand at 973.018 kb on - strand at 973.018 kb on - strand at 973.018 kb on - strand at 973.018 kb on - strand at 973.018 kb on - strand at 973.064 kb on + strand at 973.201 kb on + strand at 973.201 kb on + strand at 973.201 kb on + strand at 973.201 kb on + strand at 973.217 kb on + strand at 973.217 kb on + strand at 973.217 kb on + strand at 973.217 kb on + strand at 973.339 kb on + strand, within purM at 973.498 kb on + strand, within purM at 973.501 kb on + strand, within purM at 973.501 kb on + strand, within purM at 973.502 kb on - strand, within purM at 973.502 kb on - strand, within purM at 973.502 kb on - strand, within purM at 973.502 kb on - strand, within purM at 973.502 kb on - strand, within purM at 973.502 kb on - strand, within purM at 973.621 kb on + strand, within purM at 973.621 kb on + strand, within purM at 973.621 kb on + strand, within purM at 973.622 kb on - strand, within purM at 973.622 kb on - strand, within purM at 973.622 kb on - strand, within purM at 973.622 kb on - strand, within purM at 973.622 kb on - strand, within purM at 973.622 kb on - strand, within purM at 973.636 kb on + strand, within purM at 973.637 kb on - strand, within purM at 973.637 kb on - strand, within purM at 973.757 kb on - strand, within purM at 973.809 kb on - strand, within purM at 973.809 kb on - strand, within purM at 973.861 kb on + strand, within purM at 973.861 kb on + strand, within purM at 973.862 kb on - strand, within purM at 974.370 kb on + strand, within purN at 974.500 kb on + strand, within purN at 974.501 kb on - strand, within purN at 974.547 kb on + strand, within purN at 974.547 kb on + strand, within purN at 974.592 kb on + strand, within purN at 974.592 kb on + strand, within purN at 974.592 kb on + strand, within purN at 974.592 kb on + strand, within purN at 974.592 kb on + strand, within purN at 974.593 kb on - strand, within purN at 974.593 kb on - strand, within purN at 974.593 kb on - strand, within purN at 974.698 kb on + strand, within purN at 974.698 kb on + strand, within purN at 974.707 kb on + strand, within purN at 974.707 kb on + strand, within purN at 974.707 kb on + strand, within purN at 974.707 kb on + strand, within purN at 974.708 kb on - strand, within purN at 974.710 kb on + strand, within purN at 974.711 kb on - strand, within purN at 974.711 kb on - strand, within purN at 974.711 kb on - strand, within purN at 974.716 kb on + strand, within purN at 974.716 kb on + strand, within purN at 974.717 kb on - strand, within purN at 974.778 kb on + strand, within purN at 974.779 kb on - strand, within purN at 974.840 kb on - strand at 974.840 kb on - strand at 974.896 kb on + strand at 974.978 kb on + strand, within COO64_RS07305 at 974.978 kb on + strand, within COO64_RS07305 at 974.979 kb on - strand, within COO64_RS07305 at 975.107 kb on - strand, within COO64_RS07305 at 975.107 kb on - strand, within COO64_RS07305 at 975.146 kb on + strand, within COO64_RS07305 at 975.146 kb on + strand, within COO64_RS07305 at 975.146 kb on + strand, within COO64_RS07305 at 975.146 kb on + strand, within COO64_RS07305 at 975.147 kb on - strand, within COO64_RS07305 at 975.147 kb on - strand, within COO64_RS07305
Per-strain Table
Position Strand Gene LocusTag Fraction supernatant control, M9 with 0.25X LB remove 972,204 + COO64_RS07290 0.40 -1.0 972,204 + COO64_RS07290 0.40 +0.5 972,204 + COO64_RS07290 0.40 +0.1 972,204 + COO64_RS07290 0.40 +1.1 972,204 + COO64_RS07290 0.40 -0.1 972,204 + COO64_RS07290 0.40 -0.1 972,204 + COO64_RS07290 0.40 -2.1 972,205 - COO64_RS07290 0.40 -0.4 972,205 - COO64_RS07290 0.40 +0.2 972,750 - -1.5 972,750 - -2.5 972,815 + +1.1 972,815 + -0.3 972,815 + +0.1 972,815 + -0.9 972,815 + -1.0 972,816 - -0.2 972,816 - -0.1 972,816 - +0.0 972,816 - -0.8 972,819 + -0.1 972,819 + +0.5 972,819 + -0.5 972,820 - +0.7 972,820 - -0.5 972,820 - +0.0 972,820 - +0.4 972,820 - +0.6 972,820 - -0.2 972,820 - -0.8 972,853 + -0.0 972,854 - -0.7 972,854 - -0.9 972,926 + +0.2 972,927 - -0.2 972,927 - -1.0 972,927 - +0.9 972,949 + -0.1 972,949 + -0.7 972,949 + -0.8 972,949 + -0.0 972,949 + -0.5 972,949 + +0.2 972,949 + -1.1 972,950 - -0.1 972,950 - +0.2 972,950 - +0.2 972,950 - -0.2 972,950 - +0.2 972,950 - +0.9 972,950 - +0.9 972,950 - +0.4 972,950 - +0.4 972,950 - -0.3 972,950 - +1.4 972,951 + +0.5 972,951 + +0.6 972,951 + -1.0 972,951 + -0.5 972,952 - -0.6 972,952 - +0.9 972,952 - +1.9 972,952 - -2.4 972,952 - -1.3 972,952 - -0.9 972,952 - +0.5 972,952 - -0.3 972,952 - +0.4 972,956 + +1.9 972,956 + +0.3 972,956 + -0.4 972,956 + -0.1 972,957 - -0.9 972,957 - +0.1 972,957 - +0.6 972,957 - -0.5 972,957 - +0.2 972,957 - +0.0 972,958 + -1.1 972,958 + +0.1 972,958 + +0.4 972,958 + +0.4 972,958 + -1.5 972,958 + +0.5 972,958 + +0.1 972,958 + -0.4 972,958 + -0.1 972,958 + -0.1 972,958 + -0.4 972,959 - +0.4 972,959 - +0.8 972,959 - +0.2 972,959 - +0.7 972,959 - -0.6 972,959 - -0.3 972,959 - -0.3 972,959 - +2.2 972,993 + -0.3 972,993 + -0.6 972,993 + -0.6 972,993 + +0.5 972,994 - -1.3 973,001 - -1.1 973,014 + +0.4 973,014 + +0.0 973,014 + +0.5 973,015 - +0.5 973,015 - +0.2 973,017 + -0.9 973,017 + -0.0 973,017 + -0.6 973,017 + -0.2 973,018 - -0.2 973,018 - -1.2 973,018 - +0.9 973,018 - -0.3 973,018 - +0.9 973,018 - +0.2 973,018 - +0.1 973,018 - +1.2 973,018 - +0.4 973,064 + -0.1 973,201 + +0.1 973,201 + -1.2 973,201 + -1.2 973,201 + -2.2 973,217 + +0.9 973,217 + -0.4 973,217 + -0.9 973,217 + +0.4 973,339 + purM COO64_RS07295 0.15 -1.9 973,498 + purM COO64_RS07295 0.30 +0.4 973,501 + purM COO64_RS07295 0.31 -0.6 973,501 + purM COO64_RS07295 0.31 -1.2 973,502 - purM COO64_RS07295 0.31 +0.9 973,502 - purM COO64_RS07295 0.31 +1.9 973,502 - purM COO64_RS07295 0.31 -1.2 973,502 - purM COO64_RS07295 0.31 -0.4 973,502 - purM COO64_RS07295 0.31 -0.2 973,502 - purM COO64_RS07295 0.31 -0.5 973,621 + purM COO64_RS07295 0.42 -1.1 973,621 + purM COO64_RS07295 0.42 -0.1 973,621 + purM COO64_RS07295 0.42 -1.1 973,622 - purM COO64_RS07295 0.42 -1.1 973,622 - purM COO64_RS07295 0.42 -2.5 973,622 - purM COO64_RS07295 0.42 -1.0 973,622 - purM COO64_RS07295 0.42 -0.6 973,622 - purM COO64_RS07295 0.42 -1.4 973,622 - purM COO64_RS07295 0.42 -1.9 973,636 + purM COO64_RS07295 0.43 -2.1 973,637 - purM COO64_RS07295 0.43 -0.4 973,637 - purM COO64_RS07295 0.43 -1.2 973,757 - purM COO64_RS07295 0.55 -1.6 973,809 - purM COO64_RS07295 0.60 -1.3 973,809 - purM COO64_RS07295 0.60 -1.1 973,861 + purM COO64_RS07295 0.65 -2.4 973,861 + purM COO64_RS07295 0.65 -0.9 973,862 - purM COO64_RS07295 0.65 -1.9 974,370 + purN COO64_RS07300 0.21 -0.8 974,500 + purN COO64_RS07300 0.41 -0.6 974,501 - purN COO64_RS07300 0.41 +0.3 974,547 + purN COO64_RS07300 0.48 -2.5 974,547 + purN COO64_RS07300 0.48 -2.7 974,592 + purN COO64_RS07300 0.55 -1.1 974,592 + purN COO64_RS07300 0.55 -3.1 974,592 + purN COO64_RS07300 0.55 -2.1 974,592 + purN COO64_RS07300 0.55 -1.6 974,592 + purN COO64_RS07300 0.55 -0.6 974,593 - purN COO64_RS07300 0.55 -1.3 974,593 - purN COO64_RS07300 0.55 -1.0 974,593 - purN COO64_RS07300 0.55 -0.6 974,698 + purN COO64_RS07300 0.71 +0.2 974,698 + purN COO64_RS07300 0.71 +0.5 974,707 + purN COO64_RS07300 0.72 -0.4 974,707 + purN COO64_RS07300 0.72 -0.9 974,707 + purN COO64_RS07300 0.72 -0.9 974,707 + purN COO64_RS07300 0.72 +1.7 974,708 - purN COO64_RS07300 0.72 -0.1 974,710 + purN COO64_RS07300 0.73 -0.2 974,711 - purN COO64_RS07300 0.73 -1.6 974,711 - purN COO64_RS07300 0.73 -0.4 974,711 - purN COO64_RS07300 0.73 -0.7 974,716 + purN COO64_RS07300 0.74 -0.8 974,716 + purN COO64_RS07300 0.74 -0.1 974,717 - purN COO64_RS07300 0.74 -1.0 974,778 + purN COO64_RS07300 0.83 +0.5 974,779 - purN COO64_RS07300 0.83 -1.4 974,840 - +0.4 974,840 - -0.9 974,896 + +0.1 974,978 + COO64_RS07305 0.11 +0.2 974,978 + COO64_RS07305 0.11 +0.1 974,979 - COO64_RS07305 0.12 -0.9 975,107 - COO64_RS07305 0.30 +0.1 975,107 - COO64_RS07305 0.30 -0.2 975,146 + COO64_RS07305 0.35 -0.5 975,146 + COO64_RS07305 0.35 -1.5 975,146 + COO64_RS07305 0.35 +0.5 975,146 + COO64_RS07305 0.35 -0.4 975,147 - COO64_RS07305 0.35 +0.1 975,147 - COO64_RS07305 0.35 -1.7
Or see this region's nucleotide sequence