Experiment: supernatant control, M9 with 0.25X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mltG and pabC are separated by 3 nucleotides pabC and fabF overlap by 1 nucleotides fabF and acpP are separated by 104 nucleotides acpP and fabG are separated by 196 nucleotides
COO64_RS05785: mltG - endolytic transglycosylase MltG, at 673,457 to 674,596
mltG
COO64_RS05790: pabC - aminodeoxychorismate lyase, at 674,600 to 675,415
pabC
COO64_RS05795: fabF - beta-ketoacyl-ACP synthase II, at 675,415 to 676,659
fabF
COO64_RS05800: acpP - acyl carrier protein, at 676,764 to 677,000
acpP
COO64_RS05805: fabG - 3-oxoacyl-ACP reductase FabG, at 677,197 to 677,937
fabG
Position (kb) 675
676
677 Strain fitness (log2 ratio) -2
-1
0
1
2 at 674.431 kb on - strand, within mltG at 674.431 kb on - strand, within mltG at 674.431 kb on - strand, within mltG at 674.431 kb on - strand, within mltG at 674.438 kb on - strand, within mltG at 674.438 kb on - strand, within mltG at 674.438 kb on - strand, within mltG at 674.438 kb on - strand, within mltG at 674.438 kb on - strand, within mltG at 674.438 kb on - strand, within mltG at 674.588 kb on - strand at 674.588 kb on - strand at 674.674 kb on + strand at 674.674 kb on + strand at 674.674 kb on + strand at 674.674 kb on + strand at 674.674 kb on + strand at 674.675 kb on - strand at 674.701 kb on - strand, within pabC at 674.887 kb on + strand, within pabC at 674.887 kb on + strand, within pabC at 674.887 kb on + strand, within pabC at 674.887 kb on + strand, within pabC at 674.887 kb on + strand, within pabC at 674.887 kb on + strand, within pabC at 674.887 kb on + strand, within pabC at 674.888 kb on - strand, within pabC at 674.888 kb on - strand, within pabC at 674.888 kb on - strand, within pabC at 674.888 kb on - strand, within pabC at 674.888 kb on - strand, within pabC at 674.888 kb on - strand, within pabC at 674.888 kb on - strand, within pabC at 674.888 kb on - strand, within pabC at 674.888 kb on - strand, within pabC at 674.888 kb on - strand, within pabC at 674.889 kb on + strand, within pabC at 674.889 kb on + strand, within pabC at 674.889 kb on + strand, within pabC at 674.889 kb on + strand, within pabC at 674.889 kb on + strand, within pabC at 674.889 kb on + strand, within pabC at 674.889 kb on + strand, within pabC at 674.889 kb on + strand, within pabC at 674.889 kb on + strand, within pabC at 674.890 kb on - strand, within pabC at 674.890 kb on - strand, within pabC at 674.890 kb on - strand, within pabC at 674.890 kb on - strand, within pabC at 674.890 kb on - strand, within pabC at 674.890 kb on - strand, within pabC at 674.890 kb on - strand, within pabC at 674.890 kb on - strand, within pabC at 674.890 kb on - strand, within pabC at 674.890 kb on - strand, within pabC at 674.890 kb on - strand, within pabC at 674.890 kb on - strand, within pabC at 674.940 kb on + strand, within pabC at 674.940 kb on + strand, within pabC at 674.941 kb on - strand, within pabC at 674.941 kb on - strand, within pabC at 674.972 kb on + strand, within pabC at 674.972 kb on + strand, within pabC at 674.972 kb on + strand, within pabC at 674.973 kb on - strand, within pabC at 675.109 kb on + strand, within pabC at 675.109 kb on + strand, within pabC at 675.110 kb on - strand, within pabC at 675.172 kb on + strand, within pabC at 675.172 kb on + strand, within pabC at 675.172 kb on + strand, within pabC at 675.172 kb on + strand, within pabC at 675.172 kb on + strand, within pabC at 675.172 kb on + strand, within pabC at 675.173 kb on - strand, within pabC at 675.173 kb on - strand, within pabC at 675.173 kb on - strand, within pabC at 675.173 kb on - strand, within pabC at 675.173 kb on - strand, within pabC at 675.173 kb on - strand, within pabC at 675.173 kb on - strand, within pabC at 675.216 kb on - strand, within pabC at 675.291 kb on + strand, within pabC at 675.291 kb on + strand, within pabC at 675.292 kb on - strand, within pabC at 675.453 kb on + strand at 675.453 kb on + strand at 675.677 kb on + strand, within fabF at 675.677 kb on + strand, within fabF at 675.677 kb on + strand, within fabF at 675.678 kb on - strand, within fabF at 675.761 kb on + strand, within fabF at 675.761 kb on + strand, within fabF at 675.762 kb on - strand, within fabF at 675.762 kb on - strand, within fabF at 675.762 kb on - strand, within fabF at 675.858 kb on - strand, within fabF at 675.896 kb on + strand, within fabF at 675.896 kb on + strand, within fabF at 675.896 kb on + strand, within fabF at 675.897 kb on - strand, within fabF at 675.897 kb on - strand, within fabF at 675.897 kb on - strand, within fabF at 675.897 kb on - strand, within fabF at 676.150 kb on - strand, within fabF at 676.183 kb on - strand, within fabF at 676.187 kb on + strand, within fabF at 676.187 kb on + strand, within fabF at 676.187 kb on + strand, within fabF at 676.187 kb on + strand, within fabF at 676.187 kb on + strand, within fabF at 676.187 kb on + strand, within fabF at 676.187 kb on + strand, within fabF at 676.188 kb on - strand, within fabF at 676.188 kb on - strand, within fabF at 676.188 kb on - strand, within fabF at 676.188 kb on - strand, within fabF at 676.188 kb on - strand, within fabF at 676.188 kb on - strand, within fabF at 676.188 kb on - strand, within fabF at 676.191 kb on + strand, within fabF at 676.191 kb on + strand, within fabF at 676.191 kb on + strand, within fabF at 676.192 kb on - strand, within fabF at 676.192 kb on - strand, within fabF at 676.192 kb on - strand, within fabF at 676.201 kb on + strand, within fabF at 676.273 kb on - strand, within fabF at 676.382 kb on - strand, within fabF at 676.475 kb on + strand, within fabF at 676.475 kb on + strand, within fabF at 676.475 kb on + strand, within fabF at 676.476 kb on - strand, within fabF at 676.524 kb on - strand, within fabF at 676.524 kb on - strand, within fabF at 676.539 kb on + strand at 676.539 kb on + strand at 676.539 kb on + strand at 676.539 kb on + strand at 676.555 kb on + strand at 676.555 kb on + strand at 676.555 kb on + strand at 676.555 kb on + strand at 676.555 kb on + strand at 676.555 kb on + strand at 676.556 kb on - strand at 676.556 kb on - strand at 676.556 kb on - strand at 676.556 kb on - strand at 676.556 kb on - strand at 676.556 kb on - strand at 676.623 kb on + strand at 676.624 kb on - strand at 676.624 kb on - strand at 676.650 kb on + strand at 676.683 kb on + strand at 676.683 kb on + strand at 676.684 kb on - strand at 676.684 kb on - strand at 676.684 kb on - strand at 676.684 kb on - strand at 676.684 kb on - strand at 676.684 kb on - strand at 676.694 kb on + strand at 676.694 kb on + strand at 676.694 kb on + strand at 676.694 kb on + strand at 676.756 kb on - strand at 676.756 kb on - strand at 676.756 kb on - strand at 676.756 kb on - strand at 676.756 kb on - strand at 676.766 kb on - strand at 676.766 kb on - strand at 677.027 kb on - strand at 677.027 kb on - strand at 677.027 kb on - strand at 677.027 kb on - strand at 677.027 kb on - strand at 677.027 kb on - strand at 677.027 kb on - strand at 677.027 kb on - strand at 677.027 kb on - strand at 677.051 kb on - strand at 677.051 kb on - strand at 677.051 kb on - strand at 677.051 kb on - strand at 677.051 kb on - strand at 677.051 kb on - strand at 677.051 kb on - strand at 677.057 kb on - strand at 677.119 kb on - strand at 677.138 kb on - strand at 677.138 kb on - strand at 677.138 kb on - strand at 677.138 kb on - strand at 677.138 kb on - strand at 677.140 kb on - strand at 677.198 kb on + strand at 677.199 kb on - strand at 677.205 kb on - strand at 677.205 kb on - strand at 677.205 kb on - strand at 677.205 kb on - strand at 677.205 kb on - strand at 677.205 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction supernatant control, M9 with 0.25X LB remove 674,431 - mltG COO64_RS05785 0.85 -0.5 674,431 - mltG COO64_RS05785 0.85 -0.5 674,431 - mltG COO64_RS05785 0.85 +0.3 674,431 - mltG COO64_RS05785 0.85 +0.2 674,438 - mltG COO64_RS05785 0.86 -1.9 674,438 - mltG COO64_RS05785 0.86 -1.4 674,438 - mltG COO64_RS05785 0.86 -0.5 674,438 - mltG COO64_RS05785 0.86 +0.6 674,438 - mltG COO64_RS05785 0.86 -1.1 674,438 - mltG COO64_RS05785 0.86 -0.9 674,588 - -1.3 674,588 - +0.1 674,674 + +1.2 674,674 + +0.0 674,674 + +0.4 674,674 + -0.9 674,674 + -0.6 674,675 - -0.7 674,701 - pabC COO64_RS05790 0.12 -0.3 674,887 + pabC COO64_RS05790 0.35 +0.0 674,887 + pabC COO64_RS05790 0.35 +0.3 674,887 + pabC COO64_RS05790 0.35 +0.5 674,887 + pabC COO64_RS05790 0.35 +0.6 674,887 + pabC COO64_RS05790 0.35 +0.6 674,887 + pabC COO64_RS05790 0.35 +0.6 674,887 + pabC COO64_RS05790 0.35 -0.1 674,888 - pabC COO64_RS05790 0.35 -0.2 674,888 - pabC COO64_RS05790 0.35 +0.6 674,888 - pabC COO64_RS05790 0.35 +0.1 674,888 - pabC COO64_RS05790 0.35 +0.3 674,888 - pabC COO64_RS05790 0.35 +1.5 674,888 - pabC COO64_RS05790 0.35 +0.6 674,888 - pabC COO64_RS05790 0.35 +1.0 674,888 - pabC COO64_RS05790 0.35 -0.2 674,888 - pabC COO64_RS05790 0.35 -0.5 674,888 - pabC COO64_RS05790 0.35 +0.2 674,889 + pabC COO64_RS05790 0.35 +0.5 674,889 + pabC COO64_RS05790 0.35 +1.5 674,889 + pabC COO64_RS05790 0.35 -2.3 674,889 + pabC COO64_RS05790 0.35 +0.5 674,889 + pabC COO64_RS05790 0.35 -0.5 674,889 + pabC COO64_RS05790 0.35 -1.0 674,889 + pabC COO64_RS05790 0.35 +0.5 674,889 + pabC COO64_RS05790 0.35 -0.1 674,889 + pabC COO64_RS05790 0.35 -0.3 674,890 - pabC COO64_RS05790 0.36 -0.2 674,890 - pabC COO64_RS05790 0.36 +0.6 674,890 - pabC COO64_RS05790 0.36 -0.1 674,890 - pabC COO64_RS05790 0.36 -0.1 674,890 - pabC COO64_RS05790 0.36 -0.2 674,890 - pabC COO64_RS05790 0.36 -0.1 674,890 - pabC COO64_RS05790 0.36 +0.9 674,890 - pabC COO64_RS05790 0.36 +0.5 674,890 - pabC COO64_RS05790 0.36 -1.3 674,890 - pabC COO64_RS05790 0.36 -1.2 674,890 - pabC COO64_RS05790 0.36 -0.5 674,890 - pabC COO64_RS05790 0.36 -0.7 674,940 + pabC COO64_RS05790 0.42 +0.9 674,940 + pabC COO64_RS05790 0.42 -1.7 674,941 - pabC COO64_RS05790 0.42 -0.2 674,941 - pabC COO64_RS05790 0.42 -0.4 674,972 + pabC COO64_RS05790 0.46 -1.1 674,972 + pabC COO64_RS05790 0.46 -1.3 674,972 + pabC COO64_RS05790 0.46 +0.2 674,973 - pabC COO64_RS05790 0.46 -0.2 675,109 + pabC COO64_RS05790 0.62 +0.1 675,109 + pabC COO64_RS05790 0.62 +0.6 675,110 - pabC COO64_RS05790 0.62 +0.5 675,172 + pabC COO64_RS05790 0.70 +0.5 675,172 + pabC COO64_RS05790 0.70 +0.1 675,172 + pabC COO64_RS05790 0.70 -0.3 675,172 + pabC COO64_RS05790 0.70 -0.2 675,172 + pabC COO64_RS05790 0.70 -0.1 675,172 + pabC COO64_RS05790 0.70 -0.6 675,173 - pabC COO64_RS05790 0.70 -0.9 675,173 - pabC COO64_RS05790 0.70 -0.9 675,173 - pabC COO64_RS05790 0.70 -0.5 675,173 - pabC COO64_RS05790 0.70 -0.4 675,173 - pabC COO64_RS05790 0.70 -1.8 675,173 - pabC COO64_RS05790 0.70 -0.6 675,173 - pabC COO64_RS05790 0.70 -0.0 675,216 - pabC COO64_RS05790 0.75 +0.9 675,291 + pabC COO64_RS05790 0.85 -0.0 675,291 + pabC COO64_RS05790 0.85 +1.3 675,292 - pabC COO64_RS05790 0.85 -0.3 675,453 + -0.7 675,453 + -0.4 675,677 + fabF COO64_RS05795 0.21 +0.3 675,677 + fabF COO64_RS05795 0.21 +0.1 675,677 + fabF COO64_RS05795 0.21 +0.9 675,678 - fabF COO64_RS05795 0.21 -0.7 675,761 + fabF COO64_RS05795 0.28 -1.1 675,761 + fabF COO64_RS05795 0.28 -1.3 675,762 - fabF COO64_RS05795 0.28 -0.3 675,762 - fabF COO64_RS05795 0.28 -0.4 675,762 - fabF COO64_RS05795 0.28 -0.7 675,858 - fabF COO64_RS05795 0.36 -0.5 675,896 + fabF COO64_RS05795 0.39 -0.6 675,896 + fabF COO64_RS05795 0.39 -0.9 675,896 + fabF COO64_RS05795 0.39 -1.6 675,897 - fabF COO64_RS05795 0.39 +1.4 675,897 - fabF COO64_RS05795 0.39 -0.1 675,897 - fabF COO64_RS05795 0.39 +0.7 675,897 - fabF COO64_RS05795 0.39 -0.7 676,150 - fabF COO64_RS05795 0.59 -0.1 676,183 - fabF COO64_RS05795 0.62 -1.3 676,187 + fabF COO64_RS05795 0.62 +0.3 676,187 + fabF COO64_RS05795 0.62 +0.3 676,187 + fabF COO64_RS05795 0.62 +0.1 676,187 + fabF COO64_RS05795 0.62 -1.7 676,187 + fabF COO64_RS05795 0.62 -2.2 676,187 + fabF COO64_RS05795 0.62 -1.3 676,187 + fabF COO64_RS05795 0.62 -0.4 676,188 - fabF COO64_RS05795 0.62 +1.2 676,188 - fabF COO64_RS05795 0.62 -0.6 676,188 - fabF COO64_RS05795 0.62 -1.1 676,188 - fabF COO64_RS05795 0.62 -1.4 676,188 - fabF COO64_RS05795 0.62 -0.5 676,188 - fabF COO64_RS05795 0.62 +0.3 676,188 - fabF COO64_RS05795 0.62 +0.9 676,191 + fabF COO64_RS05795 0.62 +0.1 676,191 + fabF COO64_RS05795 0.62 -2.0 676,191 + fabF COO64_RS05795 0.62 +0.1 676,192 - fabF COO64_RS05795 0.62 -0.7 676,192 - fabF COO64_RS05795 0.62 +0.0 676,192 - fabF COO64_RS05795 0.62 -0.1 676,201 + fabF COO64_RS05795 0.63 -1.7 676,273 - fabF COO64_RS05795 0.69 +0.5 676,382 - fabF COO64_RS05795 0.78 +1.9 676,475 + fabF COO64_RS05795 0.85 -0.7 676,475 + fabF COO64_RS05795 0.85 -0.7 676,475 + fabF COO64_RS05795 0.85 -0.4 676,476 - fabF COO64_RS05795 0.85 -1.4 676,524 - fabF COO64_RS05795 0.89 +0.1 676,524 - fabF COO64_RS05795 0.89 -0.9 676,539 + +0.3 676,539 + -0.7 676,539 + -0.9 676,539 + +0.9 676,555 + -0.7 676,555 + -0.7 676,555 + +0.3 676,555 + +0.9 676,555 + -2.0 676,555 + +0.3 676,556 - -0.9 676,556 - -0.4 676,556 - -0.9 676,556 - +0.1 676,556 - +0.3 676,556 - -0.7 676,623 + -1.3 676,624 - -0.8 676,624 - -0.3 676,650 + +0.2 676,683 + -0.2 676,683 + -0.7 676,684 - +0.3 676,684 - -0.7 676,684 - +0.5 676,684 - +0.1 676,684 - -0.9 676,684 - +0.7 676,694 + -0.1 676,694 + -0.1 676,694 + -2.0 676,694 + -0.4 676,756 - +0.5 676,756 - -1.4 676,756 - -0.1 676,756 - -0.1 676,756 - -0.7 676,766 - -0.5 676,766 - +0.1 677,027 - -0.1 677,027 - -1.4 677,027 - -1.8 677,027 - +0.4 677,027 - -0.3 677,027 - -2.1 677,027 - -0.3 677,027 - +0.3 677,027 - -1.2 677,051 - -0.3 677,051 - -1.3 677,051 - -0.1 677,051 - -0.1 677,051 - +0.3 677,051 - +1.5 677,051 - -0.9 677,057 - -0.8 677,119 - +0.5 677,138 - +0.5 677,138 - -0.6 677,138 - +0.5 677,138 - -1.2 677,138 - -0.8 677,140 - -0.4 677,198 + +1.1 677,199 - -0.4 677,205 - -0.9 677,205 - -1.9 677,205 - -0.3 677,205 - +0.3 677,205 - +0.2 677,205 - -1.6
Or see this region's nucleotide sequence