Experiment: supernatant control, M9 with 0.25X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt phoU and pstB are separated by 121 nucleotides pstB and pstA are separated by 97 nucleotides
COO64_RS01695: phoU - phosphate signaling complex protein PhoU, at 346,856 to 347,614
phoU
COO64_RS01700: pstB - phosphate ABC transporter ATP-binding protein PstB, at 347,736 to 348,569
pstB
COO64_RS01705: pstA - phosphate ABC transporter permease PstA, at 348,667 to 350,283
pstA
Position (kb) 347
348
349 Strain fitness (log2 ratio) -2
-1
0
1
2 at 346.857 kb on + strand at 346.857 kb on + strand at 346.857 kb on + strand at 346.857 kb on + strand at 346.857 kb on + strand at 346.857 kb on + strand at 346.857 kb on + strand at 346.857 kb on + strand at 346.857 kb on + strand at 346.857 kb on + strand at 346.857 kb on + strand at 346.858 kb on - strand at 346.858 kb on - strand at 346.858 kb on - strand at 346.858 kb on - strand at 346.858 kb on - strand at 346.858 kb on - strand at 346.858 kb on - strand at 346.858 kb on - strand at 346.858 kb on - strand at 346.858 kb on - strand at 346.858 kb on - strand at 346.858 kb on - strand at 346.858 kb on - strand at 346.858 kb on - strand at 346.858 kb on - strand at 346.861 kb on + strand at 346.861 kb on + strand at 346.861 kb on + strand at 346.861 kb on + strand at 346.861 kb on + strand at 346.862 kb on - strand at 346.862 kb on - strand at 346.886 kb on - strand at 346.921 kb on + strand at 346.921 kb on + strand at 346.921 kb on + strand at 346.922 kb on - strand at 346.922 kb on - strand at 346.959 kb on - strand, within phoU at 346.959 kb on - strand, within phoU at 347.642 kb on + strand at 347.642 kb on + strand at 347.643 kb on - strand at 347.643 kb on - strand at 347.743 kb on + strand at 347.834 kb on - strand, within pstB at 347.834 kb on - strand, within pstB at 347.834 kb on - strand, within pstB at 347.834 kb on - strand, within pstB at 347.834 kb on - strand, within pstB at 347.834 kb on - strand, within pstB at 347.834 kb on - strand, within pstB at 347.848 kb on + strand, within pstB at 347.849 kb on - strand, within pstB at 347.880 kb on - strand, within pstB at 347.880 kb on - strand, within pstB at 347.902 kb on + strand, within pstB at 347.902 kb on + strand, within pstB at 347.903 kb on - strand, within pstB at 347.921 kb on - strand, within pstB at 347.921 kb on - strand, within pstB at 347.921 kb on - strand, within pstB at 348.173 kb on - strand, within pstB at 348.187 kb on + strand, within pstB at 348.187 kb on + strand, within pstB at 348.187 kb on + strand, within pstB at 348.188 kb on - strand, within pstB at 348.271 kb on + strand, within pstB at 348.271 kb on + strand, within pstB at 348.271 kb on + strand, within pstB at 348.272 kb on - strand, within pstB at 348.272 kb on - strand, within pstB at 348.335 kb on + strand, within pstB at 348.347 kb on + strand, within pstB at 348.347 kb on + strand, within pstB at 348.348 kb on - strand, within pstB at 348.348 kb on - strand, within pstB at 348.451 kb on + strand, within pstB at 348.452 kb on - strand, within pstB at 348.452 kb on - strand, within pstB at 348.454 kb on + strand, within pstB at 348.484 kb on - strand, within pstB at 348.586 kb on + strand at 348.586 kb on + strand at 348.636 kb on + strand at 348.636 kb on + strand at 348.636 kb on + strand at 348.637 kb on - strand at 348.637 kb on - strand at 348.637 kb on - strand at 348.637 kb on - strand at 348.648 kb on + strand at 348.648 kb on + strand at 348.649 kb on - strand at 348.649 kb on - strand at 348.654 kb on + strand at 348.654 kb on + strand at 348.654 kb on + strand at 348.654 kb on + strand at 348.654 kb on + strand at 348.654 kb on + strand at 348.655 kb on - strand at 348.657 kb on + strand at 348.657 kb on + strand at 348.657 kb on + strand at 348.657 kb on + strand at 348.657 kb on + strand at 348.657 kb on + strand at 348.657 kb on + strand at 348.657 kb on + strand at 348.658 kb on - strand at 348.658 kb on - strand at 348.658 kb on - strand at 348.658 kb on - strand at 348.658 kb on - strand at 348.658 kb on - strand at 348.658 kb on - strand at 348.672 kb on + strand at 348.672 kb on + strand at 348.673 kb on - strand at 348.673 kb on - strand at 348.686 kb on + strand at 348.686 kb on + strand at 348.686 kb on + strand at 348.686 kb on + strand at 348.687 kb on - strand at 348.687 kb on - strand at 348.687 kb on - strand at 348.687 kb on - strand at 348.743 kb on - strand at 348.770 kb on + strand at 348.771 kb on - strand at 348.821 kb on + strand at 348.821 kb on + strand at 348.821 kb on + strand at 348.822 kb on - strand at 348.822 kb on - strand at 348.822 kb on - strand at 348.822 kb on - strand at 348.822 kb on - strand at 348.822 kb on - strand at 348.822 kb on - strand at 348.822 kb on - strand at 348.822 kb on - strand at 348.822 kb on - strand at 348.867 kb on - strand, within pstA at 348.867 kb on - strand, within pstA at 348.867 kb on - strand, within pstA at 348.872 kb on + strand, within pstA at 348.872 kb on + strand, within pstA at 348.872 kb on + strand, within pstA at 348.872 kb on + strand, within pstA at 348.872 kb on + strand, within pstA at 348.872 kb on + strand, within pstA at 348.873 kb on - strand, within pstA at 348.873 kb on - strand, within pstA at 348.873 kb on - strand, within pstA at 348.873 kb on - strand, within pstA at 348.873 kb on - strand, within pstA at 349.226 kb on + strand, within pstA at 349.226 kb on + strand, within pstA at 349.226 kb on + strand, within pstA at 349.226 kb on + strand, within pstA at 349.226 kb on + strand, within pstA at 349.226 kb on + strand, within pstA at 349.227 kb on - strand, within pstA at 349.227 kb on - strand, within pstA at 349.227 kb on - strand, within pstA at 349.256 kb on + strand, within pstA at 349.332 kb on - strand, within pstA at 349.332 kb on - strand, within pstA at 349.343 kb on + strand, within pstA at 349.343 kb on + strand, within pstA at 349.343 kb on + strand, within pstA at 349.344 kb on - strand, within pstA at 349.344 kb on - strand, within pstA at 349.490 kb on + strand, within pstA at 349.490 kb on + strand, within pstA at 349.490 kb on + strand, within pstA at 349.490 kb on + strand, within pstA at 349.490 kb on + strand, within pstA at 349.490 kb on + strand, within pstA at 349.491 kb on - strand, within pstA at 349.491 kb on - strand, within pstA at 349.491 kb on - strand, within pstA at 349.491 kb on - strand, within pstA at 349.491 kb on - strand, within pstA at 349.491 kb on - strand, within pstA at 349.511 kb on - strand, within pstA at 349.519 kb on - strand, within pstA
Per-strain Table
Position Strand Gene LocusTag Fraction supernatant control, M9 with 0.25X LB remove 346,857 + +0.8 346,857 + -0.7 346,857 + +2.1 346,857 + -0.5 346,857 + +0.1 346,857 + +0.2 346,857 + +1.1 346,857 + +0.2 346,857 + -0.7 346,857 + -0.8 346,857 + +0.1 346,858 - +0.9 346,858 - +0.3 346,858 - -0.8 346,858 - -0.3 346,858 - -0.5 346,858 - +0.8 346,858 - -0.4 346,858 - -0.2 346,858 - -0.2 346,858 - +0.1 346,858 - -0.1 346,858 - -0.5 346,858 - -0.0 346,858 - +0.7 346,858 - +0.9 346,861 + -0.5 346,861 + +0.1 346,861 + -1.5 346,861 + +0.4 346,861 + +0.1 346,862 - +0.7 346,862 - -0.9 346,886 - -0.5 346,921 + -1.1 346,921 + -0.6 346,921 + -0.5 346,922 - -0.8 346,922 - +0.8 346,959 - phoU COO64_RS01695 0.14 +0.8 346,959 - phoU COO64_RS01695 0.14 -0.4 347,642 + +0.1 347,642 + -0.3 347,643 - +0.5 347,643 - +1.7 347,743 + -0.1 347,834 - pstB COO64_RS01700 0.12 +0.1 347,834 - pstB COO64_RS01700 0.12 +0.5 347,834 - pstB COO64_RS01700 0.12 +0.5 347,834 - pstB COO64_RS01700 0.12 -0.2 347,834 - pstB COO64_RS01700 0.12 +0.6 347,834 - pstB COO64_RS01700 0.12 -0.5 347,834 - pstB COO64_RS01700 0.12 -0.7 347,848 + pstB COO64_RS01700 0.13 -0.9 347,849 - pstB COO64_RS01700 0.14 -1.2 347,880 - pstB COO64_RS01700 0.17 -0.1 347,880 - pstB COO64_RS01700 0.17 -0.2 347,902 + pstB COO64_RS01700 0.20 +1.1 347,902 + pstB COO64_RS01700 0.20 -0.9 347,903 - pstB COO64_RS01700 0.20 -0.7 347,921 - pstB COO64_RS01700 0.22 -0.2 347,921 - pstB COO64_RS01700 0.22 +0.1 347,921 - pstB COO64_RS01700 0.22 -0.9 348,173 - pstB COO64_RS01700 0.52 -0.9 348,187 + pstB COO64_RS01700 0.54 +0.1 348,187 + pstB COO64_RS01700 0.54 -0.5 348,187 + pstB COO64_RS01700 0.54 -0.2 348,188 - pstB COO64_RS01700 0.54 -0.7 348,271 + pstB COO64_RS01700 0.64 -1.5 348,271 + pstB COO64_RS01700 0.64 -0.2 348,271 + pstB COO64_RS01700 0.64 +0.8 348,272 - pstB COO64_RS01700 0.64 -1.1 348,272 - pstB COO64_RS01700 0.64 +0.3 348,335 + pstB COO64_RS01700 0.72 -0.9 348,347 + pstB COO64_RS01700 0.73 -1.2 348,347 + pstB COO64_RS01700 0.73 +0.5 348,348 - pstB COO64_RS01700 0.73 +0.1 348,348 - pstB COO64_RS01700 0.73 -0.5 348,451 + pstB COO64_RS01700 0.86 +0.5 348,452 - pstB COO64_RS01700 0.86 -0.2 348,452 - pstB COO64_RS01700 0.86 -1.7 348,454 + pstB COO64_RS01700 0.86 -1.4 348,484 - pstB COO64_RS01700 0.90 +0.1 348,586 + -0.0 348,586 + +0.5 348,636 + -1.5 348,636 + -1.1 348,636 + -0.0 348,637 - -0.7 348,637 - +0.4 348,637 - +1.1 348,637 - +0.1 348,648 + -1.2 348,648 + +0.1 348,649 - +1.3 348,649 - -0.7 348,654 + +0.5 348,654 + +0.2 348,654 + -0.9 348,654 + -0.8 348,654 + -0.5 348,654 + -0.2 348,655 - +0.1 348,657 + +0.3 348,657 + -0.6 348,657 + -0.6 348,657 + -1.1 348,657 + -0.6 348,657 + +0.6 348,657 + -0.9 348,657 + -0.2 348,658 - -0.3 348,658 - +1.8 348,658 - +1.1 348,658 - -0.7 348,658 - +0.8 348,658 - +0.5 348,658 - -0.4 348,672 + +0.5 348,672 + +0.2 348,673 - +2.1 348,673 - -0.3 348,686 + +0.6 348,686 + -0.6 348,686 + +0.4 348,686 + +0.9 348,687 - -1.5 348,687 - -1.2 348,687 - -0.2 348,687 - -1.1 348,743 - +1.7 348,770 + +0.4 348,771 - +0.1 348,821 + -0.1 348,821 + -0.2 348,821 + -0.5 348,822 - -0.1 348,822 - +0.1 348,822 - +1.7 348,822 - +0.2 348,822 - -0.7 348,822 - -2.1 348,822 - -0.6 348,822 - -0.6 348,822 - -0.8 348,822 - +0.5 348,867 - pstA COO64_RS01705 0.12 +0.0 348,867 - pstA COO64_RS01705 0.12 -0.7 348,867 - pstA COO64_RS01705 0.12 +0.5 348,872 + pstA COO64_RS01705 0.13 -0.2 348,872 + pstA COO64_RS01705 0.13 -0.7 348,872 + pstA COO64_RS01705 0.13 -1.1 348,872 + pstA COO64_RS01705 0.13 -0.8 348,872 + pstA COO64_RS01705 0.13 +0.5 348,872 + pstA COO64_RS01705 0.13 -0.9 348,873 - pstA COO64_RS01705 0.13 -0.8 348,873 - pstA COO64_RS01705 0.13 -0.2 348,873 - pstA COO64_RS01705 0.13 +0.2 348,873 - pstA COO64_RS01705 0.13 +0.9 348,873 - pstA COO64_RS01705 0.13 -0.4 349,226 + pstA COO64_RS01705 0.35 -0.5 349,226 + pstA COO64_RS01705 0.35 -1.5 349,226 + pstA COO64_RS01705 0.35 -0.9 349,226 + pstA COO64_RS01705 0.35 +0.5 349,226 + pstA COO64_RS01705 0.35 -1.1 349,226 + pstA COO64_RS01705 0.35 -0.5 349,227 - pstA COO64_RS01705 0.35 +0.3 349,227 - pstA COO64_RS01705 0.35 -0.2 349,227 - pstA COO64_RS01705 0.35 +0.3 349,256 + pstA COO64_RS01705 0.36 -1.7 349,332 - pstA COO64_RS01705 0.41 +0.6 349,332 - pstA COO64_RS01705 0.41 -0.1 349,343 + pstA COO64_RS01705 0.42 -0.2 349,343 + pstA COO64_RS01705 0.42 -0.5 349,343 + pstA COO64_RS01705 0.42 -0.5 349,344 - pstA COO64_RS01705 0.42 -0.7 349,344 - pstA COO64_RS01705 0.42 +0.9 349,490 + pstA COO64_RS01705 0.51 -1.5 349,490 + pstA COO64_RS01705 0.51 -0.5 349,490 + pstA COO64_RS01705 0.51 -1.1 349,490 + pstA COO64_RS01705 0.51 +0.1 349,490 + pstA COO64_RS01705 0.51 -0.5 349,490 + pstA COO64_RS01705 0.51 -1.6 349,491 - pstA COO64_RS01705 0.51 -0.4 349,491 - pstA COO64_RS01705 0.51 -0.2 349,491 - pstA COO64_RS01705 0.51 -1.2 349,491 - pstA COO64_RS01705 0.51 -0.2 349,491 - pstA COO64_RS01705 0.51 +0.5 349,491 - pstA COO64_RS01705 0.51 -0.4 349,511 - pstA COO64_RS01705 0.52 +0.1 349,519 - pstA COO64_RS01705 0.53 -1.1
Or see this region's nucleotide sequence