Strain Fitness in Pseudomonas sp. SVBP6 around COO64_RS00510

Experiment: supernatant control, M9 with 0.25X LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	supernatant control, M9 with 0.25X LB
107,350	+		COO64_RS00505	0.78	+0.4
107,350	+		COO64_RS00505	0.78	-0.1
107,378	+		COO64_RS00505	0.78	-0.3
107,378	+		COO64_RS00505	0.78	-0.3
107,379	-		COO64_RS00505	0.78	-0.3
107,423	-		COO64_RS00505	0.79	+0.0
107,458	+		COO64_RS00505	0.80	+0.0
107,459	-		COO64_RS00505	0.80	-0.9
107,496	+		COO64_RS00505	0.81	-0.1
107,551	+		COO64_RS00505	0.82	+0.7
107,551	+		COO64_RS00505	0.82	-0.1
107,551	+		COO64_RS00505	0.82	-0.7
107,552	-		COO64_RS00505	0.82	-0.3
107,557	+		COO64_RS00505	0.82	+1.0
107,557	+		COO64_RS00505	0.82	-0.1
107,557	+		COO64_RS00505	0.82	-0.0
107,557	+		COO64_RS00505	0.82	-1.1
107,558	-		COO64_RS00505	0.82	-1.4
107,558	-		COO64_RS00505	0.82	-0.6
107,558	-		COO64_RS00505	0.82	+0.4
107,572	+		COO64_RS00505	0.83	-0.4
107,572	+		COO64_RS00505	0.83	-0.1
107,572	+		COO64_RS00505	0.83	+0.4
107,572	+		COO64_RS00505	0.83	-1.7
107,572	+		COO64_RS00505	0.83	-0.1
107,573	-		COO64_RS00505	0.83	+0.3
107,573	-		COO64_RS00505	0.83	+0.0
107,573	-		COO64_RS00505	0.83	+0.4
107,573	-		COO64_RS00505	0.83	-0.3
107,618	+		COO64_RS00505	0.84	-1.0
107,618	+		COO64_RS00505	0.84	+0.5
107,618	+		COO64_RS00505	0.84	-1.0
107,618	+		COO64_RS00505	0.84	+1.5
107,618	+		COO64_RS00505	0.84	-1.3
107,619	-		COO64_RS00505	0.84	-0.9
107,619	-		COO64_RS00505	0.84	-0.7
107,623	+		COO64_RS00505	0.84	-1.9
107,624	-		COO64_RS00505	0.84	+0.2
107,624	-		COO64_RS00505	0.84	+0.6
107,624	-		COO64_RS00505	0.84	+0.2
107,626	+		COO64_RS00505	0.84	-0.6
107,627	-		COO64_RS00505	0.84	+0.3
107,627	-		COO64_RS00505	0.84	+0.4
107,699	-		COO64_RS00505	0.86	+0.2
107,715	+		COO64_RS00505	0.86	-0.0
107,779	+		COO64_RS00505	0.87	+0.9
107,779	+		COO64_RS00505	0.87	-0.1
107,779	+		COO64_RS00505	0.87	+0.4
107,780	-		COO64_RS00505	0.87	-1.9
107,780	-		COO64_RS00505	0.87	+0.6
107,806	+		COO64_RS00505	0.88	-0.5
107,806	+		COO64_RS00505	0.88	-0.1
107,806	+		COO64_RS00505	0.88	+0.1
107,806	+		COO64_RS00505	0.88	+0.3
107,806	+		COO64_RS00505	0.88	+1.0
107,807	-		COO64_RS00505	0.88	-1.0
107,807	-		COO64_RS00505	0.88	+1.3
107,807	-		COO64_RS00505	0.88	+1.7
107,807	-		COO64_RS00505	0.88	-0.1
107,807	-		COO64_RS00505	0.88	-0.0
107,824	+		COO64_RS00505	0.88	-0.7
107,824	+		COO64_RS00505	0.88	+1.0
107,824	+		COO64_RS00505	0.88	-0.7
107,824	+		COO64_RS00505	0.88	+0.3
107,825	-		COO64_RS00505	0.89	+0.5
107,825	-		COO64_RS00505	0.89	+0.0
107,825	-		COO64_RS00505	0.89	-0.5
107,891	-				+0.2
107,897	-				+0.4
107,897	-				-0.1
107,897	-				+1.0
107,974	+				+1.4
107,975	-				-1.6
108,037	+				+0.2
108,037	+				-0.0
108,037	+				-0.3
108,096	+				+0.3
108,096	+				-0.7
108,096	+				-0.0
108,096	+				-1.9
108,096	+				+0.1
108,096	+				-2.2
108,096	+				+0.9
108,096	+				-0.3
108,096	+				+0.2
108,096	+				-0.6
108,096	+				+0.2
108,096	+				-0.4
108,096	+				-0.1
108,096	+				+0.6
108,097	-				-0.8
108,097	-				+0.5
108,097	-				-0.1
108,097	-				-0.3
108,097	-				+0.6
108,097	-				-0.7
108,097	-				+0.8
108,097	-				+0.1
108,100	+				+0.2
108,100	+				-0.0
108,139	+				+1.1
108,140	-				+0.9
108,140	-				+0.8
108,140	-				+0.0
108,140	-				+0.5
108,140	-				-2.2
108,193	-				-0.7
108,214	+				+0.4
108,215	-				-1.9
108,233	-				+0.9
108,233	-				-1.8
108,233	-				-0.5
108,285	+				+1.1
108,285	+				+0.1
108,285	+				-0.3
108,285	+				+2.0
108,286	-				+0.2
108,286	-				+0.6
108,287	-				-0.7
108,297	+				+0.3
108,297	+				+0.5
108,297	+				-1.1
108,297	+				-1.1
108,297	+				-0.2
108,298	-				+0.5
108,298	-				+1.5
108,298	-				+0.2
108,298	-				+0.2
108,298	-				+0.4
108,299	+				-0.7
108,299	+				+0.2
108,299	+				-0.5
108,300	-				+0.5
108,300	-				+1.2
108,300	-				-1.1
108,300	-				+1.3
108,698	+		COO64_RS00510	0.84	-1.0
108,699	-		COO64_RS00510	0.84	-0.8
108,810	+				+1.0
108,810	+				-0.8
108,810	+				+0.6
108,811	-				-2.2
108,811	-				+0.3
108,811	-				+0.3
108,811	-				+0.4
108,811	-				-1.6
108,811	-				+1.4
108,830	+				+0.7
108,830	+				-1.3
108,830	+				+0.3
108,830	+				-1.4
108,830	+				-0.8
108,830	+				-0.3
108,830	+				-0.5
108,831	-				-1.3
108,831	-				+0.3
108,831	-				-1.3
108,947	-				+0.7
109,000	+		COO64_RS00515	0.13	+0.3
109,001	-		COO64_RS00515	0.13	+1.2
109,001	-		COO64_RS00515	0.13	-0.1
109,016	+		COO64_RS00515	0.15	-0.8
109,016	+		COO64_RS00515	0.15	+0.4
109,017	-		COO64_RS00515	0.15	+0.3
109,017	-		COO64_RS00515	0.15	-3.1
109,017	-		COO64_RS00515	0.15	+1.8
109,137	+		COO64_RS00515	0.25	-1.0
109,138	-		COO64_RS00515	0.25	-0.8
109,286	+		COO64_RS00515	0.38	-0.3
109,287	-		COO64_RS00515	0.38	-0.2
109,287	-		COO64_RS00515	0.38	-0.1
109,378	+		COO64_RS00515	0.46	-0.7
109,378	+		COO64_RS00515	0.46	-0.6
109,378	+		COO64_RS00515	0.46	+0.1
109,378	+		COO64_RS00515	0.46	+0.4
109,378	+		COO64_RS00515	0.46	+1.0
109,378	+		COO64_RS00515	0.46	+0.0
109,378	+		COO64_RS00515	0.46	-0.3
109,378	+		COO64_RS00515	0.46	-0.1
109,378	+		COO64_RS00515	0.46	-0.8
109,378	+		COO64_RS00515	0.46	-0.2
109,379	-		COO64_RS00515	0.46	-0.6
109,379	-		COO64_RS00515	0.46	-0.2
109,379	-		COO64_RS00515	0.46	-1.3
109,382	+		COO64_RS00515	0.46	-0.3
109,382	+		COO64_RS00515	0.46	-0.9
109,382	+		COO64_RS00515	0.46	+0.1
109,382	+		COO64_RS00515	0.46	+0.2
109,382	+		COO64_RS00515	0.46	-0.9
109,382	+		COO64_RS00515	0.46	+0.4
109,382	+		COO64_RS00515	0.46	+1.8
109,382	+		COO64_RS00515	0.46	+0.4
109,382	+		COO64_RS00515	0.46	+1.0
109,382	+		COO64_RS00515	0.46	-0.7
109,383	-		COO64_RS00515	0.46	-0.2
109,383	-		COO64_RS00515	0.46	+1.0
109,383	-		COO64_RS00515	0.46	+0.6
109,409	+		COO64_RS00515	0.49	-0.4
109,409	+		COO64_RS00515	0.49	-0.4
109,410	-		COO64_RS00515	0.49	+0.6
109,415	+		COO64_RS00515	0.49	-0.3
109,415	+		COO64_RS00515	0.49	-0.4
109,458	+		COO64_RS00515	0.53	-0.1
109,458	+		COO64_RS00515	0.53	+0.2
109,458	+		COO64_RS00515	0.53	-0.5
109,458	+		COO64_RS00515	0.53	-0.6
109,458	+		COO64_RS00515	0.53	-0.2
109,458	+		COO64_RS00515	0.53	+0.4
109,458	+		COO64_RS00515	0.53	+0.2
109,458	+		COO64_RS00515	0.53	-0.1
109,459	-		COO64_RS00515	0.53	-1.4
109,459	-		COO64_RS00515	0.53	-1.0
109,459	-		COO64_RS00515	0.53	-1.0
109,535	+		COO64_RS00515	0.59	+0.7
109,535	+		COO64_RS00515	0.59	+0.6
109,535	+		COO64_RS00515	0.59	-0.6
109,535	+		COO64_RS00515	0.59	-0.4
109,535	+		COO64_RS00515	0.59	-0.5
109,535	+		COO64_RS00515	0.59	+0.8
109,536	-		COO64_RS00515	0.60	+0.4
109,536	-		COO64_RS00515	0.60	-0.6
109,536	-		COO64_RS00515	0.60	-0.8
109,536	-		COO64_RS00515	0.60	-0.3
109,536	-		COO64_RS00515	0.60	-1.1
109,536	-		COO64_RS00515	0.60	-0.1
109,536	-		COO64_RS00515	0.60	-1.4
109,536	-		COO64_RS00515	0.60	+0.5
109,581	-		COO64_RS00515	0.63	-1.8
109,625	+		COO64_RS00515	0.67	-0.3
109,625	+		COO64_RS00515	0.67	+0.4
109,626	-		COO64_RS00515	0.67	+1.0
109,626	-		COO64_RS00515	0.67	+0.8
109,709	+		COO64_RS00515	0.75	+0.2
109,709	+		COO64_RS00515	0.75	+0.8
109,709	+		COO64_RS00515	0.75	+0.9
109,710	-		COO64_RS00515	0.75	-0.1
109,710	-		COO64_RS00515	0.75	+0.1
109,710	-		COO64_RS00515	0.75	-1.9
109,710	-		COO64_RS00515	0.75	-0.2
109,710	-		COO64_RS00515	0.75	+0.6
109,710	-		COO64_RS00515	0.75	-0.1
109,710	-		COO64_RS00515	0.75	+0.5
109,710	-		COO64_RS00515	0.75	+0.0
109,742	+		COO64_RS00515	0.77	-0.6
109,743	-		COO64_RS00515	0.77	-0.7
109,743	-		COO64_RS00515	0.77	+0.4