Experiment: Tara gum 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05195 and BACOVA_05194 overlap by 19 nucleotides BACOVA_05194 and BACOVA_05196 are separated by 266 nucleotides BACOVA_05196 and BACOVA_05197 overlap by 14 nucleotides
BACOVA_05195: BACOVA_05195 - hypothetical protein, at 693,821 to 695,008
_05195
BACOVA_05194: BACOVA_05194 - hypothetical protein, at 694,990 to 695,100
_05194
BACOVA_05196: BACOVA_05196 - pantothenate kinase, type III, at 695,367 to 696,155
_05196
BACOVA_05197: BACOVA_05197 - outer membrane protein transport protein, Ompp1/FadL/TodX family, at 696,142 to 697,413
_05197
Position (kb) 695
696
697 Strain fitness (log2 ratio) -2
-1
0
1 at 695.024 kb on - strand, within BACOVA_05194 at 695.039 kb on - strand, within BACOVA_05194 at 695.081 kb on + strand, within BACOVA_05194 at 695.098 kb on + strand at 695.098 kb on + strand at 695.125 kb on - strand at 695.134 kb on - strand at 695.219 kb on + strand at 695.227 kb on + strand at 695.273 kb on - strand at 695.283 kb on + strand at 695.286 kb on + strand at 695.287 kb on - strand at 695.295 kb on - strand at 695.299 kb on - strand at 695.299 kb on - strand at 695.354 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tara gum 2.5 mg/mL (C) remove 695,024 - BACOVA_05194 0.31 -0.1 695,039 - BACOVA_05194 0.44 -1.9 695,081 + BACOVA_05194 0.82 +1.0 695,098 + -0.5 695,098 + +1.2 695,125 - -1.3 695,134 - +0.4 695,219 + -0.0 695,227 + +0.0 695,273 - +0.8 695,283 + +0.4 695,286 + -0.7 695,287 - +0.3 695,295 - -0.4 695,299 - +0.1 695,299 - -1.1 695,354 + -0.7
Or see this region's nucleotide sequence