Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03370

Experiment: Tara gum 2.5 mg/mL (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBACOVA_03369 and BACOVA_03370 are separated by 2 nucleotidesBACOVA_03370 and BACOVA_03371 are separated by 20 nucleotides BACOVA_03369: BACOVA_03369 - hypothetical protein, at 69,392 to 71,920 _03369 BACOVA_03370: BACOVA_03370 - hypothetical protein, at 71,923 to 72,810 _03370 BACOVA_03371: BACOVA_03371 - hypothetical protein, at 72,831 to 74,024 _03371 Position (kb) 71 72 73Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 70.951 kb on - strand, within BACOVA_03369at 71.032 kb on + strand, within BACOVA_03369at 71.049 kb on - strand, within BACOVA_03369at 71.099 kb on - strand, within BACOVA_03369at 71.201 kb on + strand, within BACOVA_03369at 71.201 kb on + strand, within BACOVA_03369at 71.241 kb on - strand, within BACOVA_03369at 71.241 kb on - strand, within BACOVA_03369at 71.243 kb on - strand, within BACOVA_03369at 71.267 kb on + strand, within BACOVA_03369at 71.268 kb on - strand, within BACOVA_03369at 71.349 kb on + strand, within BACOVA_03369at 71.356 kb on + strand, within BACOVA_03369at 71.362 kb on + strand, within BACOVA_03369at 71.363 kb on - strand, within BACOVA_03369at 71.377 kb on + strand, within BACOVA_03369at 71.377 kb on + strand, within BACOVA_03369at 71.378 kb on - strand, within BACOVA_03369at 71.381 kb on + strand, within BACOVA_03369at 71.381 kb on + strand, within BACOVA_03369at 71.382 kb on - strand, within BACOVA_03369at 71.382 kb on - strand, within BACOVA_03369at 71.382 kb on - strand, within BACOVA_03369at 71.382 kb on - strand, within BACOVA_03369at 71.382 kb on - strand, within BACOVA_03369at 71.389 kb on + strand, within BACOVA_03369at 71.411 kb on + strand, within BACOVA_03369at 71.458 kb on + strand, within BACOVA_03369at 71.458 kb on + strand, within BACOVA_03369at 71.459 kb on - strand, within BACOVA_03369at 71.459 kb on - strand, within BACOVA_03369at 71.489 kb on + strand, within BACOVA_03369at 71.490 kb on - strand, within BACOVA_03369at 71.490 kb on - strand, within BACOVA_03369at 71.510 kb on - strand, within BACOVA_03369at 71.560 kb on - strand, within BACOVA_03369at 71.560 kb on - strand, within BACOVA_03369at 71.580 kb on - strand, within BACOVA_03369at 71.684 kb on - strandat 71.699 kb on - strandat 71.699 kb on - strandat 71.738 kb on - strandat 71.738 kb on - strandat 71.738 kb on - strandat 71.758 kb on + strandat 71.759 kb on - strandat 71.761 kb on + strandat 71.762 kb on - strandat 71.774 kb on - strandat 71.863 kb on + strandat 71.867 kb on + strandat 71.912 kb on - strandat 71.918 kb on + strandat 71.928 kb on + strandat 71.928 kb on + strandat 71.929 kb on - strandat 71.929 kb on - strandat 71.932 kb on + strandat 71.985 kb on + strandat 71.985 kb on + strandat 71.985 kb on + strandat 71.985 kb on + strandat 71.986 kb on - strandat 71.986 kb on - strandat 71.987 kb on + strandat 71.988 kb on - strandat 71.990 kb on + strandat 71.990 kb on + strandat 71.990 kb on + strandat 71.994 kb on + strandat 72.009 kb on - strandat 72.040 kb on + strand, within BACOVA_03370at 72.068 kb on - strand, within BACOVA_03370at 72.076 kb on - strand, within BACOVA_03370at 72.127 kb on + strand, within BACOVA_03370at 72.127 kb on + strand, within BACOVA_03370at 72.144 kb on + strand, within BACOVA_03370at 72.145 kb on - strand, within BACOVA_03370at 72.156 kb on + strand, within BACOVA_03370at 72.157 kb on - strand, within BACOVA_03370at 72.157 kb on - strand, within BACOVA_03370at 72.186 kb on + strand, within BACOVA_03370at 72.198 kb on - strand, within BACOVA_03370at 72.202 kb on - strand, within BACOVA_03370at 72.230 kb on - strand, within BACOVA_03370at 72.270 kb on + strand, within BACOVA_03370at 72.295 kb on + strand, within BACOVA_03370at 72.295 kb on + strand, within BACOVA_03370at 72.354 kb on + strand, within BACOVA_03370at 72.354 kb on + strand, within BACOVA_03370at 72.354 kb on + strand, within BACOVA_03370at 72.354 kb on + strand, within BACOVA_03370at 72.355 kb on - strand, within BACOVA_03370at 72.355 kb on - strand, within BACOVA_03370at 72.390 kb on + strand, within BACOVA_03370at 72.390 kb on + strand, within BACOVA_03370at 72.393 kb on + strand, within BACOVA_03370at 72.393 kb on + strand, within BACOVA_03370at 72.394 kb on - strand, within BACOVA_03370at 72.419 kb on - strand, within BACOVA_03370at 72.422 kb on + strand, within BACOVA_03370at 72.423 kb on - strand, within BACOVA_03370at 72.437 kb on + strand, within BACOVA_03370at 72.437 kb on + strand, within BACOVA_03370at 72.438 kb on - strand, within BACOVA_03370at 72.438 kb on - strand, within BACOVA_03370at 72.447 kb on + strand, within BACOVA_03370at 72.448 kb on - strand, within BACOVA_03370at 72.456 kb on + strand, within BACOVA_03370at 72.457 kb on - strand, within BACOVA_03370at 72.466 kb on + strand, within BACOVA_03370at 72.493 kb on - strand, within BACOVA_03370at 72.516 kb on + strand, within BACOVA_03370at 72.559 kb on - strand, within BACOVA_03370at 72.560 kb on + strand, within BACOVA_03370at 72.626 kb on - strand, within BACOVA_03370at 72.661 kb on - strand, within BACOVA_03370at 72.673 kb on + strand, within BACOVA_03370at 72.721 kb on - strand, within BACOVA_03370at 72.725 kb on + strandat 72.730 kb on - strandat 72.739 kb on - strandat 72.780 kb on + strandat 72.804 kb on + strandat 72.804 kb on + strandat 72.817 kb on + strandat 72.826 kb on + strandat 72.827 kb on - strandat 72.827 kb on - strandat 72.869 kb on + strandat 72.893 kb on + strandat 72.893 kb on + strandat 72.893 kb on + strandat 72.893 kb on + strandat 72.893 kb on + strandat 72.901 kb on + strandat 72.912 kb on + strandat 72.912 kb on + strandat 72.917 kb on + strandat 72.917 kb on + strandat 72.918 kb on - strandat 72.920 kb on - strandat 72.976 kb on - strand, within BACOVA_03371at 72.976 kb on - strand, within BACOVA_03371at 72.977 kb on + strand, within BACOVA_03371at 72.978 kb on - strand, within BACOVA_03371at 72.978 kb on - strand, within BACOVA_03371at 72.983 kb on - strand, within BACOVA_03371at 72.983 kb on - strand, within BACOVA_03371at 73.016 kb on - strand, within BACOVA_03371at 73.033 kb on - strand, within BACOVA_03371at 73.033 kb on - strand, within BACOVA_03371at 73.034 kb on + strand, within BACOVA_03371at 73.034 kb on + strand, within BACOVA_03371at 73.034 kb on + strand, within BACOVA_03371at 73.034 kb on + strand, within BACOVA_03371at 73.035 kb on - strand, within BACOVA_03371at 73.035 kb on - strand, within BACOVA_03371at 73.047 kb on - strand, within BACOVA_03371at 73.048 kb on + strand, within BACOVA_03371at 73.057 kb on + strand, within BACOVA_03371at 73.089 kb on - strand, within BACOVA_03371at 73.112 kb on + strand, within BACOVA_03371at 73.113 kb on - strand, within BACOVA_03371at 73.118 kb on - strand, within BACOVA_03371at 73.118 kb on - strand, within BACOVA_03371at 73.208 kb on + strand, within BACOVA_03371at 73.217 kb on - strand, within BACOVA_03371at 73.241 kb on + strand, within BACOVA_03371at 73.273 kb on + strand, within BACOVA_03371at 73.307 kb on + strand, within BACOVA_03371at 73.307 kb on + strand, within BACOVA_03371at 73.321 kb on + strand, within BACOVA_03371at 73.329 kb on - strand, within BACOVA_03371at 73.395 kb on - strand, within BACOVA_03371at 73.412 kb on - strand, within BACOVA_03371at 73.458 kb on + strand, within BACOVA_03371at 73.482 kb on - strand, within BACOVA_03371at 73.517 kb on + strand, within BACOVA_03371at 73.517 kb on + strand, within BACOVA_03371at 73.518 kb on - strand, within BACOVA_03371at 73.521 kb on + strand, within BACOVA_03371at 73.554 kb on + strand, within BACOVA_03371at 73.555 kb on - strand, within BACOVA_03371at 73.562 kb on - strand, within BACOVA_03371at 73.565 kb on + strand, within BACOVA_03371at 73.613 kb on + strand, within BACOVA_03371at 73.614 kb on - strand, within BACOVA_03371at 73.649 kb on - strand, within BACOVA_03371at 73.707 kb on - strand, within BACOVA_03371at 73.727 kb on - strand, within BACOVA_03371at 73.733 kb on + strand, within BACOVA_03371at 73.745 kb on + strand, within BACOVA_03371at 73.746 kb on - strand, within BACOVA_03371at 73.758 kb on + strand, within BACOVA_03371at 73.758 kb on + strand, within BACOVA_03371at 73.759 kb on - strand, within BACOVA_03371at 73.759 kb on - strand, within BACOVA_03371at 73.777 kb on + strand, within BACOVA_03371at 73.777 kb on + strand, within BACOVA_03371at 73.778 kb on - strand, within BACOVA_03371at 73.789 kb on + strand, within BACOVA_03371at 73.797 kb on + strand, within BACOVA_03371at 73.798 kb on - strand, within BACOVA_03371at 73.798 kb on - strand, within BACOVA_03371

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Tara gum 2.5 mg/mL (C)
remove
70,951 - BACOVA_03369 0.62 +1.2
71,032 + BACOVA_03369 0.65 -0.8
71,049 - BACOVA_03369 0.66 -1.0
71,099 - BACOVA_03369 0.67 -1.0
71,201 + BACOVA_03369 0.72 -1.5
71,201 + BACOVA_03369 0.72 -0.3
71,241 - BACOVA_03369 0.73 -1.1
71,241 - BACOVA_03369 0.73 -1.0
71,243 - BACOVA_03369 0.73 +0.3
71,267 + BACOVA_03369 0.74 +0.8
71,268 - BACOVA_03369 0.74 -0.3
71,349 + BACOVA_03369 0.77 +0.7
71,356 + BACOVA_03369 0.78 +0.5
71,362 + BACOVA_03369 0.78 -0.8
71,363 - BACOVA_03369 0.78 -1.9
71,377 + BACOVA_03369 0.78 +0.8
71,377 + BACOVA_03369 0.78 +0.7
71,378 - BACOVA_03369 0.79 +0.7
71,381 + BACOVA_03369 0.79 -0.4
71,381 + BACOVA_03369 0.79 +1.6
71,382 - BACOVA_03369 0.79 -1.7
71,382 - BACOVA_03369 0.79 -0.5
71,382 - BACOVA_03369 0.79 +0.9
71,382 - BACOVA_03369 0.79 -1.5
71,382 - BACOVA_03369 0.79 -0.8
71,389 + BACOVA_03369 0.79 -0.1
71,411 + BACOVA_03369 0.80 +0.7
71,458 + BACOVA_03369 0.82 -0.3
71,458 + BACOVA_03369 0.82 -1.7
71,459 - BACOVA_03369 0.82 -1.3
71,459 - BACOVA_03369 0.82 -1.7
71,489 + BACOVA_03369 0.83 -0.2
71,490 - BACOVA_03369 0.83 -0.7
71,490 - BACOVA_03369 0.83 -0.7
71,510 - BACOVA_03369 0.84 -0.8
71,560 - BACOVA_03369 0.86 -1.9
71,560 - BACOVA_03369 0.86 +0.3
71,580 - BACOVA_03369 0.87 +0.5
71,684 - -1.7
71,699 - -1.8
71,699 - -1.4
71,738 - -1.1
71,738 - +0.6
71,738 - -1.1
71,758 + -0.8
71,759 - +0.2
71,761 + -0.3
71,762 - -0.2
71,774 - +0.5
71,863 + +0.3
71,867 + -1.9
71,912 - -0.3
71,918 + -1.0
71,928 + -0.2
71,928 + -0.7
71,929 - +0.5
71,929 - -0.0
71,932 + +0.7
71,985 + +1.6
71,985 + +0.8
71,985 + -0.4
71,985 + +1.0
71,986 - -1.4
71,986 - -1.0
71,987 + -0.9
71,988 - +0.3
71,990 + -0.8
71,990 + -1.0
71,990 + -1.0
71,994 + -1.1
72,009 - -0.9
72,040 + BACOVA_03370 0.13 -0.8
72,068 - BACOVA_03370 0.16 -0.4
72,076 - BACOVA_03370 0.17 +0.5
72,127 + BACOVA_03370 0.23 -0.7
72,127 + BACOVA_03370 0.23 +0.6
72,144 + BACOVA_03370 0.25 -0.1
72,145 - BACOVA_03370 0.25 +0.2
72,156 + BACOVA_03370 0.26 +0.3
72,157 - BACOVA_03370 0.26 -1.8
72,157 - BACOVA_03370 0.26 -1.5
72,186 + BACOVA_03370 0.30 -0.1
72,198 - BACOVA_03370 0.31 -1.0
72,202 - BACOVA_03370 0.31 +0.3
72,230 - BACOVA_03370 0.35 -0.7
72,270 + BACOVA_03370 0.39 +0.1
72,295 + BACOVA_03370 0.42 -0.1
72,295 + BACOVA_03370 0.42 -0.4
72,354 + BACOVA_03370 0.49 -1.3
72,354 + BACOVA_03370 0.49 +0.6
72,354 + BACOVA_03370 0.49 +0.4
72,354 + BACOVA_03370 0.49 +0.4
72,355 - BACOVA_03370 0.49 -0.8
72,355 - BACOVA_03370 0.49 -0.7
72,390 + BACOVA_03370 0.53 +0.5
72,390 + BACOVA_03370 0.53 +0.9
72,393 + BACOVA_03370 0.53 +0.0
72,393 + BACOVA_03370 0.53 -1.3
72,394 - BACOVA_03370 0.53 +0.6
72,419 - BACOVA_03370 0.56 +0.3
72,422 + BACOVA_03370 0.56 -0.5
72,423 - BACOVA_03370 0.56 -0.4
72,437 + BACOVA_03370 0.58 -0.7
72,437 + BACOVA_03370 0.58 -0.8
72,438 - BACOVA_03370 0.58 +0.2
72,438 - BACOVA_03370 0.58 -3.2
72,447 + BACOVA_03370 0.59 -0.5
72,448 - BACOVA_03370 0.59 -1.1
72,456 + BACOVA_03370 0.60 -0.5
72,457 - BACOVA_03370 0.60 -2.0
72,466 + BACOVA_03370 0.61 +0.1
72,493 - BACOVA_03370 0.64 -0.5
72,516 + BACOVA_03370 0.67 +0.9
72,559 - BACOVA_03370 0.72 -1.0
72,560 + BACOVA_03370 0.72 -0.5
72,626 - BACOVA_03370 0.79 -1.4
72,661 - BACOVA_03370 0.83 +0.6
72,673 + BACOVA_03370 0.84 -1.0
72,721 - BACOVA_03370 0.90 -0.7
72,725 + +0.6
72,730 - +0.2
72,739 - -1.3
72,780 + -1.0
72,804 + -1.0
72,804 + -0.1
72,817 + +0.7
72,826 + -0.4
72,827 - +0.7
72,827 - -1.5
72,869 + -0.2
72,893 + -0.7
72,893 + +0.1
72,893 + +0.9
72,893 + -0.4
72,893 + -0.8
72,901 + +0.3
72,912 + -0.5
72,912 + -0.1
72,917 + +0.4
72,917 + -0.7
72,918 - -1.7
72,920 - -2.8
72,976 - BACOVA_03371 0.12 -1.1
72,976 - BACOVA_03371 0.12 -0.5
72,977 + BACOVA_03371 0.12 +0.3
72,978 - BACOVA_03371 0.12 -0.7
72,978 - BACOVA_03371 0.12 -1.5
72,983 - BACOVA_03371 0.13 -2.0
72,983 - BACOVA_03371 0.13 +0.1
73,016 - BACOVA_03371 0.15 -0.0
73,033 - BACOVA_03371 0.17 +0.2
73,033 - BACOVA_03371 0.17 +0.5
73,034 + BACOVA_03371 0.17 +1.0
73,034 + BACOVA_03371 0.17 +0.7
73,034 + BACOVA_03371 0.17 -0.5
73,034 + BACOVA_03371 0.17 +0.3
73,035 - BACOVA_03371 0.17 -0.2
73,035 - BACOVA_03371 0.17 +0.4
73,047 - BACOVA_03371 0.18 +1.0
73,048 + BACOVA_03371 0.18 +0.3
73,057 + BACOVA_03371 0.19 +0.2
73,089 - BACOVA_03371 0.22 +0.5
73,112 + BACOVA_03371 0.24 -0.3
73,113 - BACOVA_03371 0.24 +0.2
73,118 - BACOVA_03371 0.24 -0.9
73,118 - BACOVA_03371 0.24 +0.1
73,208 + BACOVA_03371 0.32 -0.5
73,217 - BACOVA_03371 0.32 -1.1
73,241 + BACOVA_03371 0.34 +0.6
73,273 + BACOVA_03371 0.37 -0.9
73,307 + BACOVA_03371 0.40 -1.4
73,307 + BACOVA_03371 0.40 +1.4
73,321 + BACOVA_03371 0.41 +2.0
73,329 - BACOVA_03371 0.42 +0.5
73,395 - BACOVA_03371 0.47 -0.1
73,412 - BACOVA_03371 0.49 +1.2
73,458 + BACOVA_03371 0.53 -0.5
73,482 - BACOVA_03371 0.55 +0.2
73,517 + BACOVA_03371 0.57 -1.2
73,517 + BACOVA_03371 0.57 -0.7
73,518 - BACOVA_03371 0.58 +0.8
73,521 + BACOVA_03371 0.58 -0.4
73,554 + BACOVA_03371 0.61 -0.8
73,555 - BACOVA_03371 0.61 +0.5
73,562 - BACOVA_03371 0.61 -1.7
73,565 + BACOVA_03371 0.61 +0.1
73,613 + BACOVA_03371 0.65 -0.6
73,614 - BACOVA_03371 0.66 -0.7
73,649 - BACOVA_03371 0.69 +2.0
73,707 - BACOVA_03371 0.73 -0.6
73,727 - BACOVA_03371 0.75 +0.0
73,733 + BACOVA_03371 0.76 -0.6
73,745 + BACOVA_03371 0.77 -0.2
73,746 - BACOVA_03371 0.77 +0.5
73,758 + BACOVA_03371 0.78 -0.2
73,758 + BACOVA_03371 0.78 +0.3
73,759 - BACOVA_03371 0.78 -1.1
73,759 - BACOVA_03371 0.78 +0.1
73,777 + BACOVA_03371 0.79 -0.4
73,777 + BACOVA_03371 0.79 +0.3
73,778 - BACOVA_03371 0.79 -0.2
73,789 + BACOVA_03371 0.80 +0.3
73,797 + BACOVA_03371 0.81 +0.6
73,798 - BACOVA_03371 0.81 -1.2
73,798 - BACOVA_03371 0.81 -0.3

Or see this region's nucleotide sequence