Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00515

Experiment: Tara gum 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tara gum 2.5 mg/mL (C)
11,233	+		BACOVA_00513	0.44	-0.5
11,296	-		BACOVA_00513	0.48	-0.3
11,320	-		BACOVA_00513	0.49	+0.7
11,387	+		BACOVA_00513	0.53	-0.8
11,477	+		BACOVA_00513	0.59	+1.1
11,477	+		BACOVA_00513	0.59	+0.6
11,504	+		BACOVA_00513	0.60	+0.2
11,538	+		BACOVA_00513	0.63	-0.8
11,538	+		BACOVA_00513	0.63	-0.1
11,538	+		BACOVA_00513	0.63	+0.5
11,538	+		BACOVA_00513	0.63	-1.6
11,538	+		BACOVA_00513	0.63	-0.5
11,544	-		BACOVA_00513	0.63	-0.1
11,635	-		BACOVA_00513	0.68	-0.2
11,635	-		BACOVA_00513	0.68	-0.6
11,635	-		BACOVA_00513	0.68	-3.1
11,635	-		BACOVA_00513	0.68	-0.5
11,692	-		BACOVA_00513	0.72	+2.2
11,714	+		BACOVA_00513	0.73	+0.5
11,736	+		BACOVA_00513	0.74	+0.8
11,773	-		BACOVA_00513	0.77	-0.1
11,811	+		BACOVA_00513	0.79	-0.9
11,841	-		BACOVA_00513	0.81	-0.1
11,867	-		BACOVA_00513	0.82	+1.8
11,886	+		BACOVA_00513	0.83	-2.8
11,905	+		BACOVA_00513	0.85	+1.2
11,919	+		BACOVA_00513	0.85	-0.1
11,919	+		BACOVA_00513	0.85	+0.0
11,920	-		BACOVA_00513	0.86	+0.6
11,920	-		BACOVA_00513	0.86	-0.1
12,048	+				+0.0
12,061	+				-1.5
12,062	-				+0.2
12,072	-				-0.2
12,133	+				+1.0
12,137	+				-0.4
12,138	-				+0.2
12,138	-				-2.9
12,140	-				-2.3
12,158	-				-1.4
12,160	+				-2.4
12,160	+				+0.1
12,161	-				+1.1
12,162	+				+0.6
12,163	-				-1.3
12,176	+				-1.8
12,183	-				+0.3
12,186	-				-0.5
12,241	+				-1.2
12,241	+				-0.8
12,241	+				+0.8
12,241	+				-1.0
12,241	+				+1.2
12,242	-				-0.2
12,242	-				-0.2
12,246	+				-0.2
12,247	-				-1.3
12,247	-				+0.3
12,289	+				-0.8
12,290	-				-0.2
12,295	+				-2.6
12,295	+				-0.5
12,295	+				-0.6
12,296	-				-0.9
12,297	+				-0.5
12,297	+				-2.4
12,298	-				-1.4
12,302	-				-2.2
12,314	-				+0.5
12,314	-				+1.1
12,350	+		BACOVA_00515	0.12	-0.4
12,514	+		BACOVA_00515	0.27	+0.2
12,555	+		BACOVA_00515	0.30	-0.5
12,558	+		BACOVA_00515	0.30	+0.4
12,559	-		BACOVA_00515	0.30	+0.2
12,588	+		BACOVA_00515	0.33	+0.5
12,622	+		BACOVA_00515	0.36	+0.9
12,623	-		BACOVA_00515	0.36	-0.1
12,623	-		BACOVA_00515	0.36	+0.9
12,623	-		BACOVA_00515	0.36	+1.0
12,626	-		BACOVA_00515	0.36	+0.2
12,671	-		BACOVA_00515	0.40	+0.1
12,707	-		BACOVA_00515	0.43	-0.1
12,710	-		BACOVA_00515	0.44	+0.8
12,834	+		BACOVA_00515	0.54	+0.2
12,840	+		BACOVA_00515	0.55	-0.7
12,841	-		BACOVA_00515	0.55	-0.3
12,844	+		BACOVA_00515	0.55	-1.5
12,844	+		BACOVA_00515	0.55	-0.2
12,849	-		BACOVA_00515	0.56	+0.6
12,891	-		BACOVA_00515	0.59	-0.5
12,891	-		BACOVA_00515	0.59	+0.2
12,893	+		BACOVA_00515	0.60	-0.4
12,904	+		BACOVA_00515	0.60	-1.6
12,905	-		BACOVA_00515	0.61	+1.0
12,905	-		BACOVA_00515	0.61	-0.4
12,968	+		BACOVA_00515	0.66	-1.1
12,968	+		BACOVA_00515	0.66	+0.1
12,968	+		BACOVA_00515	0.66	+1.0
12,969	-		BACOVA_00515	0.66	+0.4
12,969	-		BACOVA_00515	0.66	+0.2
12,982	+		BACOVA_00515	0.67	+0.1
12,982	+		BACOVA_00515	0.67	-0.5
12,995	-		BACOVA_00515	0.68	-1.4
12,996	+		BACOVA_00515	0.68	+0.6
12,996	+		BACOVA_00515	0.68	+0.8
12,996	+		BACOVA_00515	0.68	-0.3
12,997	-		BACOVA_00515	0.69	-0.1
13,002	+		BACOVA_00515	0.69	-0.8
13,003	-		BACOVA_00515	0.69	+0.5
13,003	-		BACOVA_00515	0.69	-0.1
13,003	-		BACOVA_00515	0.69	-1.4
13,028	-		BACOVA_00515	0.71	-1.6
13,052	+		BACOVA_00515	0.73	-1.3
13,052	+		BACOVA_00515	0.73	-0.7
13,070	-		BACOVA_00515	0.75	+0.5
13,091	+		BACOVA_00515	0.77	-1.6
13,092	-		BACOVA_00515	0.77	-2.0
13,119	-		BACOVA_00515	0.79	-1.2
13,205	+		BACOVA_00515	0.87	-0.2
13,205	+		BACOVA_00515	0.87	-0.2
13,235	+		BACOVA_00515	0.89	+0.6
13,295	+				-0.6
13,314	-				+0.6
13,330	+				-1.5
13,406	-				+0.4
13,420	-		BACOVA_00516	0.11	-1.0
13,420	-		BACOVA_00516	0.11	-0.6
13,434	-		BACOVA_00516	0.14	-0.5
13,499	-		BACOVA_00516	0.28	-0.3
13,499	-		BACOVA_00516	0.28	-1.2
13,522	+		BACOVA_00516	0.33	+0.9
13,523	-		BACOVA_00516	0.33	-1.2
13,532	+		BACOVA_00516	0.35	+0.2
13,532	+		BACOVA_00516	0.35	+0.2
13,533	-		BACOVA_00516	0.35	-0.3
13,616	+		BACOVA_00516	0.53	+0.5
13,616	+		BACOVA_00516	0.53	-0.4
13,616	+		BACOVA_00516	0.53	-0.8
13,616	+		BACOVA_00516	0.53	-0.6
13,616	+		BACOVA_00516	0.53	+0.0
13,616	+		BACOVA_00516	0.53	+1.3
13,616	+		BACOVA_00516	0.53	-0.2
13,617	-		BACOVA_00516	0.53	+0.2
13,617	-		BACOVA_00516	0.53	-1.1
13,617	-		BACOVA_00516	0.53	-0.3
13,617	-		BACOVA_00516	0.53	+0.0
13,617	-		BACOVA_00516	0.53	+0.9
13,617	-		BACOVA_00516	0.53	-0.4
13,658	+		BACOVA_00516	0.62	+1.2
13,717	-		BACOVA_00516	0.75	+0.1
13,727	+		BACOVA_00516	0.77	-0.2
13,727	+		BACOVA_00516	0.77	-1.1
13,803	+				+0.1
13,803	+				+1.0
13,803	+				-0.5
13,804	-				-0.4
13,808	-				-0.8
13,809	+				-1.5
13,812	+				-1.5
13,819	+				-0.8
13,832	-				-1.0
13,832	-				-1.0
13,853	+				+0.1
13,856	+				-2.0
13,860	-				+1.0
13,884	+				-1.1
13,892	-				-0.1
13,918	+				-0.3
13,919	-				+0.9
13,927	+				+1.3
13,928	-				-0.8
13,951	-				+0.4
13,972	-				-0.1
13,988	+				-0.6
14,046	-				-0.3
14,121	+				+0.0
14,122	+				-0.3
14,123	-				-0.3
14,174	+		BACOVA_00517	0.10	-1.2
14,174	+		BACOVA_00517	0.10	+1.0
14,174	+		BACOVA_00517	0.10	+0.4
14,186	-		BACOVA_00517	0.11	+0.6
14,291	-		BACOVA_00517	0.16	+0.4