Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00240

Experiment: Tara gum 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tara gum 2.5 mg/mL (C)
14,631	+		BACOVA_00239	0.79	+0.8
14,635	-		BACOVA_00239	0.79	+0.3
14,673	+		BACOVA_00239	0.80	+0.3
14,692	-		BACOVA_00239	0.81	+0.2
14,700	+		BACOVA_00239	0.81	+1.7
14,704	-		BACOVA_00239	0.81	-0.5
14,755	-		BACOVA_00239	0.82	+0.6
14,756	+		BACOVA_00239	0.82	+0.5
14,757	-		BACOVA_00239	0.82	-1.9
14,832	-		BACOVA_00239	0.84	+1.8
14,832	-		BACOVA_00239	0.84	+0.4
14,832	-		BACOVA_00239	0.84	+0.5
14,832	-		BACOVA_00239	0.84	-1.3
14,855	+		BACOVA_00239	0.85	+0.2
14,866	-		BACOVA_00239	0.85	-0.4
14,866	-		BACOVA_00239	0.85	-0.1
14,875	-		BACOVA_00239	0.85	+0.2
14,881	-		BACOVA_00239	0.85	-2.3
14,885	+		BACOVA_00239	0.85	-0.4
14,940	+		BACOVA_00239	0.87	+0.4
14,940	+		BACOVA_00239	0.87	+1.6
14,940	+		BACOVA_00239	0.87	+0.7
14,941	-		BACOVA_00239	0.87	+0.9
14,941	-		BACOVA_00239	0.87	-1.9
14,946	+		BACOVA_00239	0.87	-1.1
14,953	-		BACOVA_00239	0.87	+0.3
14,953	-		BACOVA_00239	0.87	-1.1
14,958	+		BACOVA_00239	0.87	+0.5
15,018	+		BACOVA_00239	0.89	-1.8
15,048	-		BACOVA_00239	0.89	+0.4
15,083	-				-0.4
15,106	+				+0.8
15,114	+				+0.1
15,115	-				+0.3
15,155	+				+1.1
15,172	-				-0.1
15,172	-				-1.2
15,196	-				+0.3
15,204	+				+1.2
15,208	-				-0.1
15,208	-				+0.3
15,240	+				-0.0
15,240	+				-1.2
15,247	-				-0.6
15,303	-				-1.3
15,303	-				-0.5
15,323	+				+0.2
15,338	-				+1.7
15,338	-				+1.2
15,339	+				-2.1
15,340	-				+0.3
15,414	+				+0.2
15,425	-				+0.1
15,450	-				+0.5
15,456	+				-0.0
15,459	-				+0.9
15,510	+				+0.6
15,549	-				-0.4
15,549	-				+0.1
15,552	-				-0.4
15,566	+		BACOVA_00240	0.13	+1.0
15,575	-		BACOVA_00240	0.21	-0.1
15,579	-		BACOVA_00240	0.24	+0.2
15,581	-		BACOVA_00240	0.26	+0.0
15,590	+		BACOVA_00240	0.34	-1.5
15,617	-		BACOVA_00240	0.59	-2.8
15,635	-		BACOVA_00240	0.75	-1.6
15,659	-				-0.1
15,661	-				-0.6
15,684	+				+0.4
15,684	+				-1.0
15,684	+				+1.5
15,685	-				-0.2
15,685	-				-0.1
15,710	+				-0.4
15,716	+				-0.2
15,717	-				+0.4
15,736	+				-0.2
15,736	+				-0.8
15,744	+				-0.2
15,744	+				+0.4
15,745	-				+0.5
15,748	-				+0.5
15,750	-				-0.3
15,772	+				-1.2
15,806	+				-1.0
15,806	+				+0.3
15,806	+				+0.2
15,806	+				-0.2
15,807	-				+0.5
15,807	-				+0.3
15,807	-				-1.4
15,822	+				-0.2
15,833	+				+0.1
15,865	-				+0.8
15,889	-				-0.5
15,920	-		BACOVA_00241	0.18	-1.3
15,933	-		BACOVA_00241	0.27	-1.6
15,933	-		BACOVA_00241	0.27	-0.6
15,955	-		BACOVA_00241	0.41	-0.5
15,970	-		BACOVA_00241	0.51	+0.0
15,991	+		BACOVA_00241	0.65	+0.6
15,992	-		BACOVA_00241	0.66	-1.2
16,009	-		BACOVA_00241	0.77	+0.4
16,030	-				-0.3
16,036	-				+0.1
16,057	+				-0.2
16,058	-				-0.9
16,068	+				-0.4
16,104	+				-0.5
16,109	+				-0.6
16,109	+				-0.8
16,110	-				+0.5
16,119	-				-1.0
16,119	-				-0.6
16,130	+				+0.1
16,130	+				-0.0
16,130	+				-0.7
16,131	-				+0.6
16,131	-				-1.0
16,131	-				-0.2
16,135	-				+0.2
16,243	-				-0.7
16,258	-				-1.4
16,308	+				+0.4
16,329	-				+2.2
16,338	-				-1.8
16,349	+				-0.7
16,350	-				+0.2
16,353	+				-0.4
16,359	+				-0.7
16,359	+				+0.0
16,409	+		BACOVA_00242	0.11	+1.1
16,450	-		BACOVA_00242	0.13	-0.6
16,544	-		BACOVA_00242	0.16	+0.9
16,545	+		BACOVA_00242	0.16	+0.8
16,546	-		BACOVA_00242	0.16	-0.9
16,614	+		BACOVA_00242	0.18	-0.1
16,615	-		BACOVA_00242	0.18	+0.5
16,635	-		BACOVA_00242	0.19	-0.1