Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03100

Experiment: Urea (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_03099 and MPMX26_03100 are separated by 49 nucleotidesMPMX26_03100 and MPMX26_03101 are separated by 142 nucleotidesMPMX26_03101 and MPMX26_03102 are separated by 78 nucleotides MPMX26_03099: MPMX26_03099 - hypothetical protein, at 13,877 to 15,244 _03099 MPMX26_03100: MPMX26_03100 - hypothetical protein, at 15,294 to 15,704 _03100 MPMX26_03101: MPMX26_03101 - Mercuric resistance operon regulatory protein, at 15,847 to 16,239 _03101 MPMX26_03102: MPMX26_03102 - Zinc transporter ZitB, at 16,318 to 17,610 _03102 Position (kb) 15 16Strain fitness (log2 ratio) -2 -1 0 1 2at 14.437 kb on + strand, within MPMX26_03099at 14.674 kb on - strand, within MPMX26_03099at 14.674 kb on - strand, within MPMX26_03099at 15.190 kb on - strandat 15.190 kb on - strandat 15.310 kb on - strandat 15.347 kb on - strand, within MPMX26_03100at 15.414 kb on - strand, within MPMX26_03100at 15.422 kb on - strand, within MPMX26_03100at 15.446 kb on - strand, within MPMX26_03100at 15.536 kb on - strand, within MPMX26_03100at 15.536 kb on - strand, within MPMX26_03100at 15.558 kb on - strand, within MPMX26_03100at 15.558 kb on - strand, within MPMX26_03100at 15.585 kb on - strand, within MPMX26_03100at 15.585 kb on - strand, within MPMX26_03100at 15.595 kb on - strand, within MPMX26_03100at 15.595 kb on - strand, within MPMX26_03100at 15.595 kb on - strand, within MPMX26_03100at 15.595 kb on - strand, within MPMX26_03100at 15.595 kb on - strand, within MPMX26_03100at 15.630 kb on - strand, within MPMX26_03100at 15.648 kb on - strand, within MPMX26_03100at 15.666 kb on - strandat 15.666 kb on - strandat 15.666 kb on - strandat 15.666 kb on - strandat 15.748 kb on - strandat 15.748 kb on - strandat 15.889 kb on - strand, within MPMX26_03101at 15.973 kb on - strand, within MPMX26_03101at 16.111 kb on - strand, within MPMX26_03101at 16.505 kb on + strand, within MPMX26_03102

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
remove
14,437 + MPMX26_03099 0.41 +0.8
14,674 - MPMX26_03099 0.58 +1.7
14,674 - MPMX26_03099 0.58 +1.0
15,190 - +0.8
15,190 - +2.4
15,310 - +2.4
15,347 - MPMX26_03100 0.13 +0.4
15,414 - MPMX26_03100 0.29 -0.6
15,422 - MPMX26_03100 0.31 +1.4
15,446 - MPMX26_03100 0.37 +1.0
15,536 - MPMX26_03100 0.59 +1.5
15,536 - MPMX26_03100 0.59 -0.2
15,558 - MPMX26_03100 0.64 +0.4
15,558 - MPMX26_03100 0.64 +0.4
15,585 - MPMX26_03100 0.71 -0.4
15,585 - MPMX26_03100 0.71 -0.1
15,595 - MPMX26_03100 0.73 +0.2
15,595 - MPMX26_03100 0.73 +0.4
15,595 - MPMX26_03100 0.73 +0.2
15,595 - MPMX26_03100 0.73 +0.0
15,595 - MPMX26_03100 0.73 +0.6
15,630 - MPMX26_03100 0.82 +0.5
15,648 - MPMX26_03100 0.86 -0.1
15,666 - -0.0
15,666 - +1.1
15,666 - +1.1
15,666 - -0.9
15,748 - +0.2
15,748 - +0.4
15,889 - MPMX26_03101 0.11 +0.1
15,973 - MPMX26_03101 0.32 -1.8
16,111 - MPMX26_03101 0.67 -0.6
16,505 + MPMX26_03102 0.14 +0.5

Or see this region's nucleotide sequence