Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02898 and MPMX26_02899 are separated by 1 nucleotides MPMX26_02899 and MPMX26_02900 are separated by 192 nucleotides
MPMX26_02898: MPMX26_02898 - Cation/acetate symporter ActP, at 3,004,587 to 3,006,302
_02898
MPMX26_02899: MPMX26_02899 - Inner membrane protein YjcH, at 3,006,304 to 3,006,648
_02899
MPMX26_02900: MPMX26_02900 - Sensor histidine kinase RcsC, at 3,006,841 to 3,010,338
_02900
Position (kb)
3006
3007 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3005.304 kb on - strand, within MPMX26_02898 at 3005.306 kb on - strand, within MPMX26_02898 at 3005.306 kb on - strand, within MPMX26_02898 at 3005.311 kb on - strand, within MPMX26_02898 at 3005.336 kb on - strand, within MPMX26_02898 at 3005.336 kb on - strand, within MPMX26_02898 at 3005.336 kb on - strand, within MPMX26_02898 at 3005.348 kb on - strand, within MPMX26_02898 at 3005.487 kb on - strand, within MPMX26_02898 at 3005.529 kb on - strand, within MPMX26_02898 at 3005.539 kb on - strand, within MPMX26_02898 at 3005.539 kb on - strand, within MPMX26_02898 at 3005.597 kb on - strand, within MPMX26_02898 at 3005.597 kb on - strand, within MPMX26_02898 at 3005.602 kb on - strand, within MPMX26_02898 at 3005.661 kb on - strand, within MPMX26_02898 at 3005.674 kb on - strand, within MPMX26_02898 at 3005.674 kb on - strand, within MPMX26_02898 at 3005.674 kb on - strand, within MPMX26_02898 at 3005.674 kb on - strand, within MPMX26_02898 at 3005.674 kb on - strand, within MPMX26_02898 at 3005.674 kb on - strand, within MPMX26_02898 at 3005.674 kb on - strand, within MPMX26_02898 at 3005.674 kb on - strand, within MPMX26_02898 at 3005.689 kb on - strand, within MPMX26_02898 at 3005.709 kb on - strand, within MPMX26_02898 at 3005.718 kb on - strand, within MPMX26_02898 at 3005.718 kb on - strand, within MPMX26_02898 at 3005.750 kb on - strand, within MPMX26_02898 at 3005.765 kb on - strand, within MPMX26_02898 at 3005.785 kb on - strand, within MPMX26_02898 at 3005.785 kb on - strand, within MPMX26_02898 at 3005.785 kb on - strand, within MPMX26_02898 at 3005.785 kb on - strand, within MPMX26_02898 at 3005.785 kb on - strand, within MPMX26_02898 at 3005.785 kb on - strand, within MPMX26_02898 at 3005.785 kb on - strand, within MPMX26_02898 at 3005.785 kb on - strand, within MPMX26_02898 at 3005.785 kb on - strand, within MPMX26_02898 at 3005.793 kb on - strand, within MPMX26_02898 at 3005.823 kb on - strand, within MPMX26_02898 at 3005.879 kb on - strand, within MPMX26_02898 at 3005.879 kb on - strand, within MPMX26_02898 at 3005.879 kb on - strand, within MPMX26_02898 at 3005.879 kb on - strand, within MPMX26_02898 at 3005.879 kb on - strand, within MPMX26_02898 at 3005.879 kb on - strand, within MPMX26_02898 at 3005.899 kb on - strand, within MPMX26_02898 at 3005.899 kb on - strand, within MPMX26_02898 at 3005.939 kb on - strand, within MPMX26_02898 at 3005.947 kb on - strand, within MPMX26_02898 at 3005.976 kb on - strand, within MPMX26_02898 at 3005.976 kb on - strand, within MPMX26_02898 at 3005.981 kb on - strand, within MPMX26_02898 at 3005.981 kb on - strand, within MPMX26_02898 at 3005.981 kb on - strand, within MPMX26_02898 at 3005.981 kb on - strand, within MPMX26_02898 at 3005.990 kb on - strand, within MPMX26_02898 at 3006.000 kb on - strand, within MPMX26_02898 at 3006.002 kb on - strand, within MPMX26_02898 at 3006.042 kb on - strand, within MPMX26_02898 at 3006.042 kb on - strand, within MPMX26_02898 at 3006.042 kb on - strand, within MPMX26_02898 at 3006.044 kb on - strand, within MPMX26_02898 at 3006.092 kb on - strand, within MPMX26_02898 at 3006.102 kb on - strand, within MPMX26_02898 at 3006.102 kb on - strand, within MPMX26_02898 at 3006.102 kb on - strand, within MPMX26_02898 at 3006.102 kb on - strand, within MPMX26_02898 at 3006.102 kb on - strand, within MPMX26_02898 at 3006.110 kb on - strand, within MPMX26_02898 at 3006.110 kb on - strand, within MPMX26_02898 at 3006.110 kb on - strand, within MPMX26_02898 at 3006.110 kb on - strand, within MPMX26_02898 at 3006.120 kb on - strand, within MPMX26_02898 at 3006.147 kb on - strand at 3006.152 kb on - strand at 3006.209 kb on - strand at 3006.219 kb on - strand at 3006.219 kb on - strand at 3006.219 kb on - strand at 3006.229 kb on - strand at 3006.229 kb on - strand at 3006.229 kb on - strand at 3006.229 kb on - strand at 3006.229 kb on - strand at 3006.229 kb on - strand at 3006.230 kb on - strand at 3006.240 kb on - strand at 3006.240 kb on - strand at 3006.240 kb on - strand at 3006.240 kb on - strand at 3006.240 kb on - strand at 3006.240 kb on - strand at 3006.240 kb on - strand at 3006.240 kb on - strand at 3006.240 kb on - strand at 3006.240 kb on - strand at 3006.331 kb on - strand at 3006.331 kb on - strand at 3006.331 kb on - strand at 3006.331 kb on - strand at 3006.376 kb on - strand, within MPMX26_02899 at 3006.399 kb on - strand, within MPMX26_02899 at 3006.409 kb on - strand, within MPMX26_02899 at 3006.421 kb on - strand, within MPMX26_02899 at 3006.456 kb on - strand, within MPMX26_02899 at 3006.475 kb on - strand, within MPMX26_02899 at 3006.475 kb on - strand, within MPMX26_02899 at 3006.523 kb on - strand, within MPMX26_02899 at 3006.523 kb on - strand, within MPMX26_02899 at 3006.523 kb on - strand, within MPMX26_02899 at 3006.523 kb on - strand, within MPMX26_02899 at 3006.539 kb on - strand, within MPMX26_02899 at 3006.555 kb on - strand, within MPMX26_02899 at 3006.632 kb on + strand at 3006.632 kb on + strand at 3006.640 kb on - strand at 3006.640 kb on - strand at 3006.640 kb on - strand at 3006.640 kb on - strand at 3006.640 kb on - strand at 3006.640 kb on - strand at 3006.640 kb on - strand at 3006.640 kb on - strand at 3006.640 kb on - strand at 3006.650 kb on + strand at 3006.651 kb on - strand at 3006.658 kb on - strand at 3006.742 kb on - strand at 3006.873 kb on - strand at 3006.873 kb on - strand at 3006.873 kb on - strand at 3006.889 kb on + strand at 3006.889 kb on + strand at 3006.889 kb on + strand at 3006.899 kb on + strand at 3006.969 kb on + strand at 3006.978 kb on + strand at 3006.984 kb on - strand at 3006.984 kb on - strand at 3006.986 kb on - strand at 3006.986 kb on - strand at 3006.987 kb on + strand at 3007.013 kb on + strand at 3007.013 kb on + strand at 3007.023 kb on + strand at 3007.060 kb on - strand at 3007.080 kb on + strand at 3007.109 kb on + strand at 3007.146 kb on + strand at 3007.146 kb on + strand at 3007.177 kb on + strand at 3007.217 kb on + strand, within MPMX26_02900 at 3007.239 kb on + strand, within MPMX26_02900 at 3007.247 kb on + strand, within MPMX26_02900 at 3007.247 kb on + strand, within MPMX26_02900 at 3007.247 kb on + strand, within MPMX26_02900 at 3007.266 kb on + strand, within MPMX26_02900 at 3007.266 kb on + strand, within MPMX26_02900 at 3007.266 kb on + strand, within MPMX26_02900 at 3007.266 kb on + strand, within MPMX26_02900 at 3007.266 kb on + strand, within MPMX26_02900 at 3007.271 kb on + strand, within MPMX26_02900 at 3007.271 kb on + strand, within MPMX26_02900 at 3007.279 kb on - strand, within MPMX26_02900 at 3007.279 kb on - strand, within MPMX26_02900 at 3007.279 kb on - strand, within MPMX26_02900 at 3007.330 kb on + strand, within MPMX26_02900 at 3007.330 kb on + strand, within MPMX26_02900 at 3007.335 kb on + strand, within MPMX26_02900 at 3007.335 kb on + strand, within MPMX26_02900 at 3007.353 kb on + strand, within MPMX26_02900 at 3007.353 kb on + strand, within MPMX26_02900 at 3007.353 kb on + strand, within MPMX26_02900 at 3007.356 kb on + strand, within MPMX26_02900 at 3007.358 kb on + strand, within MPMX26_02900 at 3007.358 kb on + strand, within MPMX26_02900 at 3007.358 kb on + strand, within MPMX26_02900 at 3007.371 kb on + strand, within MPMX26_02900 at 3007.371 kb on + strand, within MPMX26_02900 at 3007.376 kb on + strand, within MPMX26_02900 at 3007.386 kb on + strand, within MPMX26_02900 at 3007.393 kb on + strand, within MPMX26_02900 at 3007.393 kb on + strand, within MPMX26_02900 at 3007.393 kb on + strand, within MPMX26_02900 at 3007.443 kb on + strand, within MPMX26_02900 at 3007.443 kb on + strand, within MPMX26_02900 at 3007.443 kb on + strand, within MPMX26_02900 at 3007.443 kb on + strand, within MPMX26_02900 at 3007.443 kb on + strand, within MPMX26_02900 at 3007.443 kb on + strand, within MPMX26_02900 at 3007.448 kb on + strand, within MPMX26_02900 at 3007.492 kb on - strand, within MPMX26_02900 at 3007.494 kb on + strand, within MPMX26_02900 at 3007.494 kb on + strand, within MPMX26_02900 at 3007.496 kb on + strand, within MPMX26_02900 at 3007.499 kb on + strand, within MPMX26_02900 at 3007.507 kb on - strand, within MPMX26_02900 at 3007.545 kb on + strand, within MPMX26_02900 at 3007.559 kb on + strand, within MPMX26_02900 at 3007.561 kb on + strand, within MPMX26_02900 at 3007.561 kb on + strand, within MPMX26_02900 at 3007.561 kb on + strand, within MPMX26_02900 at 3007.561 kb on + strand, within MPMX26_02900 at 3007.561 kb on + strand, within MPMX26_02900 at 3007.561 kb on + strand, within MPMX26_02900 at 3007.565 kb on + strand, within MPMX26_02900 at 3007.569 kb on - strand, within MPMX26_02900 at 3007.590 kb on + strand, within MPMX26_02900 at 3007.598 kb on + strand, within MPMX26_02900 at 3007.603 kb on + strand, within MPMX26_02900 at 3007.607 kb on + strand, within MPMX26_02900 at 3007.617 kb on + strand, within MPMX26_02900 at 3007.619 kb on + strand, within MPMX26_02900 at 3007.622 kb on + strand, within MPMX26_02900 at 3007.622 kb on + strand, within MPMX26_02900 at 3007.630 kb on - strand, within MPMX26_02900 at 3007.630 kb on - strand, within MPMX26_02900
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 3,005,304 - MPMX26_02898 0.42 -1.7 3,005,306 - MPMX26_02898 0.42 -1.1 3,005,306 - MPMX26_02898 0.42 -0.5 3,005,311 - MPMX26_02898 0.42 -0.4 3,005,336 - MPMX26_02898 0.44 -0.9 3,005,336 - MPMX26_02898 0.44 -1.2 3,005,336 - MPMX26_02898 0.44 -1.2 3,005,348 - MPMX26_02898 0.44 -0.3 3,005,487 - MPMX26_02898 0.52 -1.4 3,005,529 - MPMX26_02898 0.55 -2.2 3,005,539 - MPMX26_02898 0.55 -0.9 3,005,539 - MPMX26_02898 0.55 -1.7 3,005,597 - MPMX26_02898 0.59 -0.1 3,005,597 - MPMX26_02898 0.59 +0.1 3,005,602 - MPMX26_02898 0.59 -0.9 3,005,661 - MPMX26_02898 0.63 -1.3 3,005,674 - MPMX26_02898 0.63 -0.5 3,005,674 - MPMX26_02898 0.63 -0.6 3,005,674 - MPMX26_02898 0.63 -1.5 3,005,674 - MPMX26_02898 0.63 -2.1 3,005,674 - MPMX26_02898 0.63 -1.1 3,005,674 - MPMX26_02898 0.63 -1.1 3,005,674 - MPMX26_02898 0.63 -1.9 3,005,674 - MPMX26_02898 0.63 -1.7 3,005,689 - MPMX26_02898 0.64 -1.5 3,005,709 - MPMX26_02898 0.65 -1.0 3,005,718 - MPMX26_02898 0.66 -0.9 3,005,718 - MPMX26_02898 0.66 -2.4 3,005,750 - MPMX26_02898 0.68 -0.9 3,005,765 - MPMX26_02898 0.69 -0.7 3,005,785 - MPMX26_02898 0.70 -1.1 3,005,785 - MPMX26_02898 0.70 -1.8 3,005,785 - MPMX26_02898 0.70 -1.7 3,005,785 - MPMX26_02898 0.70 -1.8 3,005,785 - MPMX26_02898 0.70 -0.7 3,005,785 - MPMX26_02898 0.70 -0.2 3,005,785 - MPMX26_02898 0.70 -0.4 3,005,785 - MPMX26_02898 0.70 -2.4 3,005,785 - MPMX26_02898 0.70 -0.2 3,005,793 - MPMX26_02898 0.70 -1.1 3,005,823 - MPMX26_02898 0.72 -0.7 3,005,879 - MPMX26_02898 0.75 -2.4 3,005,879 - MPMX26_02898 0.75 -1.0 3,005,879 - MPMX26_02898 0.75 -1.2 3,005,879 - MPMX26_02898 0.75 -1.2 3,005,879 - MPMX26_02898 0.75 -0.8 3,005,879 - MPMX26_02898 0.75 -1.0 3,005,899 - MPMX26_02898 0.76 -3.4 3,005,899 - MPMX26_02898 0.76 -0.8 3,005,939 - MPMX26_02898 0.79 -0.8 3,005,947 - MPMX26_02898 0.79 -2.0 3,005,976 - MPMX26_02898 0.81 -1.5 3,005,976 - MPMX26_02898 0.81 -0.3 3,005,981 - MPMX26_02898 0.81 -0.9 3,005,981 - MPMX26_02898 0.81 -1.8 3,005,981 - MPMX26_02898 0.81 -1.3 3,005,981 - MPMX26_02898 0.81 -1.3 3,005,990 - MPMX26_02898 0.82 -0.4 3,006,000 - MPMX26_02898 0.82 -0.7 3,006,002 - MPMX26_02898 0.82 -1.2 3,006,042 - MPMX26_02898 0.85 -1.4 3,006,042 - MPMX26_02898 0.85 -1.2 3,006,042 - MPMX26_02898 0.85 -0.4 3,006,044 - MPMX26_02898 0.85 -0.8 3,006,092 - MPMX26_02898 0.88 -1.1 3,006,102 - MPMX26_02898 0.88 -1.6 3,006,102 - MPMX26_02898 0.88 -0.9 3,006,102 - MPMX26_02898 0.88 -1.9 3,006,102 - MPMX26_02898 0.88 -0.6 3,006,102 - MPMX26_02898 0.88 -1.1 3,006,110 - MPMX26_02898 0.89 -1.3 3,006,110 - MPMX26_02898 0.89 -2.4 3,006,110 - MPMX26_02898 0.89 -2.1 3,006,110 - MPMX26_02898 0.89 -1.8 3,006,120 - MPMX26_02898 0.89 -1.0 3,006,147 - -0.1 3,006,152 - -1.5 3,006,209 - -1.3 3,006,219 - -0.3 3,006,219 - -1.1 3,006,219 - -1.2 3,006,229 - -1.3 3,006,229 - -1.3 3,006,229 - -0.5 3,006,229 - -1.7 3,006,229 - -1.4 3,006,229 - -1.0 3,006,230 - -1.2 3,006,240 - -1.1 3,006,240 - -1.4 3,006,240 - -1.4 3,006,240 - -1.5 3,006,240 - -1.4 3,006,240 - -1.3 3,006,240 - -1.6 3,006,240 - -2.5 3,006,240 - -0.1 3,006,240 - -0.8 3,006,331 - -1.3 3,006,331 - -0.7 3,006,331 - -0.0 3,006,331 - -0.5 3,006,376 - MPMX26_02899 0.21 -1.6 3,006,399 - MPMX26_02899 0.28 -1.6 3,006,409 - MPMX26_02899 0.30 -0.6 3,006,421 - MPMX26_02899 0.34 -0.3 3,006,456 - MPMX26_02899 0.44 -1.3 3,006,475 - MPMX26_02899 0.50 -1.2 3,006,475 - MPMX26_02899 0.50 -1.2 3,006,523 - MPMX26_02899 0.63 -0.9 3,006,523 - MPMX26_02899 0.63 -1.3 3,006,523 - MPMX26_02899 0.63 -1.8 3,006,523 - MPMX26_02899 0.63 -1.2 3,006,539 - MPMX26_02899 0.68 -0.9 3,006,555 - MPMX26_02899 0.73 -0.8 3,006,632 + -1.3 3,006,632 + -0.6 3,006,640 - -0.7 3,006,640 - +0.1 3,006,640 - -0.9 3,006,640 - -1.0 3,006,640 - -1.3 3,006,640 - -0.5 3,006,640 - -1.4 3,006,640 - -0.8 3,006,640 - -0.5 3,006,650 + +0.8 3,006,651 - -0.7 3,006,658 - -0.2 3,006,742 - -0.5 3,006,873 - -0.7 3,006,873 - -2.5 3,006,873 - -1.7 3,006,889 + -2.5 3,006,889 + -0.3 3,006,889 + -3.6 3,006,899 + -2.2 3,006,969 + -4.6 3,006,978 + -1.8 3,006,984 - -2.9 3,006,984 - -1.2 3,006,986 - -0.5 3,006,986 - -2.0 3,006,987 + -2.9 3,007,013 + -3.3 3,007,013 + -3.5 3,007,023 + -3.6 3,007,060 - -1.9 3,007,080 + -2.8 3,007,109 + -1.1 3,007,146 + -2.5 3,007,146 + -3.5 3,007,177 + -3.4 3,007,217 + MPMX26_02900 0.11 -1.8 3,007,239 + MPMX26_02900 0.11 -4.7 3,007,247 + MPMX26_02900 0.12 -2.2 3,007,247 + MPMX26_02900 0.12 -3.9 3,007,247 + MPMX26_02900 0.12 -1.2 3,007,266 + MPMX26_02900 0.12 -2.6 3,007,266 + MPMX26_02900 0.12 -0.7 3,007,266 + MPMX26_02900 0.12 -1.4 3,007,266 + MPMX26_02900 0.12 -2.8 3,007,266 + MPMX26_02900 0.12 -1.2 3,007,271 + MPMX26_02900 0.12 -2.4 3,007,271 + MPMX26_02900 0.12 -3.2 3,007,279 - MPMX26_02900 0.13 -1.3 3,007,279 - MPMX26_02900 0.13 +0.3 3,007,279 - MPMX26_02900 0.13 -1.8 3,007,330 + MPMX26_02900 0.14 -2.8 3,007,330 + MPMX26_02900 0.14 -3.1 3,007,335 + MPMX26_02900 0.14 -3.0 3,007,335 + MPMX26_02900 0.14 -4.3 3,007,353 + MPMX26_02900 0.15 -2.4 3,007,353 + MPMX26_02900 0.15 -3.3 3,007,353 + MPMX26_02900 0.15 -2.5 3,007,356 + MPMX26_02900 0.15 -3.5 3,007,358 + MPMX26_02900 0.15 -1.6 3,007,358 + MPMX26_02900 0.15 -1.3 3,007,358 + MPMX26_02900 0.15 -2.0 3,007,371 + MPMX26_02900 0.15 -3.6 3,007,371 + MPMX26_02900 0.15 -2.9 3,007,376 + MPMX26_02900 0.15 -3.0 3,007,386 + MPMX26_02900 0.16 -2.1 3,007,393 + MPMX26_02900 0.16 -4.1 3,007,393 + MPMX26_02900 0.16 -3.6 3,007,393 + MPMX26_02900 0.16 -2.5 3,007,443 + MPMX26_02900 0.17 -0.5 3,007,443 + MPMX26_02900 0.17 -2.2 3,007,443 + MPMX26_02900 0.17 -1.7 3,007,443 + MPMX26_02900 0.17 -3.0 3,007,443 + MPMX26_02900 0.17 -2.1 3,007,443 + MPMX26_02900 0.17 -3.1 3,007,448 + MPMX26_02900 0.17 -1.8 3,007,492 - MPMX26_02900 0.19 -2.9 3,007,494 + MPMX26_02900 0.19 -1.8 3,007,494 + MPMX26_02900 0.19 -2.7 3,007,496 + MPMX26_02900 0.19 -1.5 3,007,499 + MPMX26_02900 0.19 -3.9 3,007,507 - MPMX26_02900 0.19 -1.5 3,007,545 + MPMX26_02900 0.20 -2.4 3,007,559 + MPMX26_02900 0.21 -2.0 3,007,561 + MPMX26_02900 0.21 -3.2 3,007,561 + MPMX26_02900 0.21 -1.2 3,007,561 + MPMX26_02900 0.21 -2.6 3,007,561 + MPMX26_02900 0.21 -2.5 3,007,561 + MPMX26_02900 0.21 -1.8 3,007,561 + MPMX26_02900 0.21 -1.9 3,007,565 + MPMX26_02900 0.21 -2.4 3,007,569 - MPMX26_02900 0.21 -1.3 3,007,590 + MPMX26_02900 0.21 -3.0 3,007,598 + MPMX26_02900 0.22 -2.7 3,007,603 + MPMX26_02900 0.22 -2.5 3,007,607 + MPMX26_02900 0.22 -1.0 3,007,617 + MPMX26_02900 0.22 -2.9 3,007,619 + MPMX26_02900 0.22 -2.6 3,007,622 + MPMX26_02900 0.22 -2.9 3,007,622 + MPMX26_02900 0.22 -2.7 3,007,630 - MPMX26_02900 0.23 -3.7 3,007,630 - MPMX26_02900 0.23 -1.9
Or see this region's nucleotide sequence