Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02661

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02660 and MPMX26_02661 are separated by 116 nucleotidesMPMX26_02661 and MPMX26_02662 are separated by 74 nucleotidesMPMX26_02662 and MPMX26_02663 are separated by 37 nucleotides MPMX26_02660: MPMX26_02660 - Ribosomal RNA large subunit methyltransferase J, at 2,756,908 to 2,757,765 _02660 MPMX26_02661: MPMX26_02661 - hypothetical protein, at 2,757,882 to 2,758,484 _02661 MPMX26_02662: MPMX26_02662 - hypothetical protein, at 2,758,559 to 2,759,086 _02662 MPMX26_02663: MPMX26_02663 - hypothetical protein, at 2,759,124 to 2,759,387 _02663 Position (kb) 2757 2758 2759Strain fitness (log2 ratio) -2 -1 0 1at 2756.929 kb on - strandat 2756.929 kb on - strandat 2756.967 kb on - strandat 2756.985 kb on - strandat 2756.985 kb on - strandat 2756.985 kb on - strandat 2756.985 kb on - strandat 2757.145 kb on - strand, within MPMX26_02660at 2757.151 kb on - strand, within MPMX26_02660at 2757.177 kb on - strand, within MPMX26_02660at 2757.226 kb on - strand, within MPMX26_02660at 2757.277 kb on - strand, within MPMX26_02660at 2757.277 kb on - strand, within MPMX26_02660at 2757.277 kb on - strand, within MPMX26_02660at 2757.318 kb on - strand, within MPMX26_02660at 2757.340 kb on - strand, within MPMX26_02660at 2757.340 kb on - strand, within MPMX26_02660at 2757.345 kb on - strand, within MPMX26_02660at 2757.345 kb on - strand, within MPMX26_02660at 2757.406 kb on - strand, within MPMX26_02660at 2757.469 kb on - strand, within MPMX26_02660at 2757.469 kb on - strand, within MPMX26_02660at 2757.469 kb on - strand, within MPMX26_02660at 2757.469 kb on - strand, within MPMX26_02660at 2757.478 kb on - strand, within MPMX26_02660at 2757.478 kb on - strand, within MPMX26_02660at 2757.478 kb on - strand, within MPMX26_02660at 2757.496 kb on - strand, within MPMX26_02660at 2757.502 kb on - strand, within MPMX26_02660at 2757.511 kb on - strand, within MPMX26_02660at 2757.541 kb on - strand, within MPMX26_02660at 2757.541 kb on - strand, within MPMX26_02660at 2757.546 kb on - strand, within MPMX26_02660at 2757.579 kb on - strand, within MPMX26_02660at 2757.579 kb on - strand, within MPMX26_02660at 2757.579 kb on - strand, within MPMX26_02660at 2757.579 kb on - strand, within MPMX26_02660at 2757.579 kb on - strand, within MPMX26_02660at 2757.606 kb on - strand, within MPMX26_02660at 2757.616 kb on - strand, within MPMX26_02660at 2757.619 kb on - strand, within MPMX26_02660at 2757.624 kb on - strand, within MPMX26_02660at 2757.633 kb on - strand, within MPMX26_02660at 2757.633 kb on - strand, within MPMX26_02660at 2757.633 kb on - strand, within MPMX26_02660at 2757.633 kb on - strand, within MPMX26_02660at 2757.633 kb on - strand, within MPMX26_02660at 2757.633 kb on - strand, within MPMX26_02660at 2757.633 kb on - strand, within MPMX26_02660at 2757.633 kb on - strand, within MPMX26_02660at 2757.667 kb on - strand, within MPMX26_02660at 2757.667 kb on - strand, within MPMX26_02660at 2757.673 kb on - strand, within MPMX26_02660at 2757.673 kb on - strand, within MPMX26_02660at 2757.687 kb on - strandat 2757.687 kb on - strandat 2757.687 kb on - strandat 2757.687 kb on - strandat 2757.687 kb on - strandat 2757.687 kb on - strandat 2757.687 kb on - strandat 2757.687 kb on - strandat 2757.999 kb on + strand, within MPMX26_02661at 2758.044 kb on + strand, within MPMX26_02661at 2758.044 kb on + strand, within MPMX26_02661at 2758.044 kb on + strand, within MPMX26_02661at 2758.044 kb on + strand, within MPMX26_02661at 2758.122 kb on + strand, within MPMX26_02661at 2758.122 kb on + strand, within MPMX26_02661at 2758.145 kb on + strand, within MPMX26_02661at 2758.167 kb on + strand, within MPMX26_02661at 2758.223 kb on + strand, within MPMX26_02661at 2758.223 kb on + strand, within MPMX26_02661at 2758.223 kb on + strand, within MPMX26_02661at 2758.223 kb on + strand, within MPMX26_02661at 2758.223 kb on + strand, within MPMX26_02661at 2758.281 kb on + strand, within MPMX26_02661at 2758.416 kb on + strand, within MPMX26_02661at 2758.418 kb on + strand, within MPMX26_02661at 2758.418 kb on + strand, within MPMX26_02661at 2758.442 kb on + strandat 2758.442 kb on + strandat 2758.442 kb on + strandat 2758.442 kb on + strandat 2758.442 kb on + strandat 2758.442 kb on + strandat 2758.455 kb on + strandat 2758.457 kb on + strandat 2758.460 kb on + strandat 2758.465 kb on + strandat 2758.467 kb on + strandat 2758.473 kb on + strandat 2758.480 kb on + strandat 2758.485 kb on + strandat 2758.486 kb on + strandat 2758.554 kb on + strandat 2758.607 kb on + strandat 2758.629 kb on + strand, within MPMX26_02662at 2758.629 kb on + strand, within MPMX26_02662at 2758.629 kb on + strand, within MPMX26_02662at 2758.647 kb on + strand, within MPMX26_02662at 2758.657 kb on + strand, within MPMX26_02662at 2758.662 kb on + strand, within MPMX26_02662at 2758.662 kb on + strand, within MPMX26_02662at 2758.662 kb on + strand, within MPMX26_02662at 2758.773 kb on + strand, within MPMX26_02662at 2758.773 kb on + strand, within MPMX26_02662at 2758.773 kb on + strand, within MPMX26_02662at 2758.774 kb on + strand, within MPMX26_02662at 2758.779 kb on + strand, within MPMX26_02662at 2758.779 kb on + strand, within MPMX26_02662at 2758.779 kb on + strand, within MPMX26_02662at 2758.779 kb on + strand, within MPMX26_02662at 2758.779 kb on + strand, within MPMX26_02662at 2758.779 kb on + strand, within MPMX26_02662at 2758.781 kb on + strand, within MPMX26_02662at 2758.801 kb on + strand, within MPMX26_02662at 2758.859 kb on + strand, within MPMX26_02662at 2758.923 kb on + strand, within MPMX26_02662at 2758.923 kb on + strand, within MPMX26_02662at 2758.923 kb on + strand, within MPMX26_02662at 2758.955 kb on + strand, within MPMX26_02662at 2758.983 kb on + strand, within MPMX26_02662at 2759.047 kb on + strandat 2759.099 kb on + strandat 2759.099 kb on + strandat 2759.160 kb on - strand, within MPMX26_02663at 2759.175 kb on - strand, within MPMX26_02663at 2759.238 kb on - strand, within MPMX26_02663at 2759.274 kb on - strand, within MPMX26_02663at 2759.322 kb on - strand, within MPMX26_02663at 2759.333 kb on - strand, within MPMX26_02663at 2759.375 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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2,756,929 - -0.2
2,756,929 - -0.2
2,756,967 - +1.1
2,756,985 - -0.4
2,756,985 - -0.2
2,756,985 - -0.3
2,756,985 - +0.7
2,757,145 - MPMX26_02660 0.28 +0.7
2,757,151 - MPMX26_02660 0.28 -0.2
2,757,177 - MPMX26_02660 0.31 -1.2
2,757,226 - MPMX26_02660 0.37 +0.3
2,757,277 - MPMX26_02660 0.43 +0.9
2,757,277 - MPMX26_02660 0.43 -0.6
2,757,277 - MPMX26_02660 0.43 -0.1
2,757,318 - MPMX26_02660 0.48 +0.2
2,757,340 - MPMX26_02660 0.50 +0.7
2,757,340 - MPMX26_02660 0.50 -0.2
2,757,345 - MPMX26_02660 0.51 -0.3
2,757,345 - MPMX26_02660 0.51 +0.4
2,757,406 - MPMX26_02660 0.58 +0.1
2,757,469 - MPMX26_02660 0.65 +0.2
2,757,469 - MPMX26_02660 0.65 +0.2
2,757,469 - MPMX26_02660 0.65 -0.8
2,757,469 - MPMX26_02660 0.65 +0.3
2,757,478 - MPMX26_02660 0.66 +0.1
2,757,478 - MPMX26_02660 0.66 -0.3
2,757,478 - MPMX26_02660 0.66 +0.8
2,757,496 - MPMX26_02660 0.69 -0.9
2,757,502 - MPMX26_02660 0.69 +0.2
2,757,511 - MPMX26_02660 0.70 -0.2
2,757,541 - MPMX26_02660 0.74 +0.1
2,757,541 - MPMX26_02660 0.74 +0.1
2,757,546 - MPMX26_02660 0.74 -0.2
2,757,579 - MPMX26_02660 0.78 -0.1
2,757,579 - MPMX26_02660 0.78 -0.5
2,757,579 - MPMX26_02660 0.78 -0.4
2,757,579 - MPMX26_02660 0.78 -0.4
2,757,579 - MPMX26_02660 0.78 -0.1
2,757,606 - MPMX26_02660 0.81 -0.0
2,757,616 - MPMX26_02660 0.83 -0.2
2,757,619 - MPMX26_02660 0.83 +0.1
2,757,624 - MPMX26_02660 0.83 -0.2
2,757,633 - MPMX26_02660 0.84 +0.6
2,757,633 - MPMX26_02660 0.84 -0.2
2,757,633 - MPMX26_02660 0.84 +0.2
2,757,633 - MPMX26_02660 0.84 -0.0
2,757,633 - MPMX26_02660 0.84 -0.1
2,757,633 - MPMX26_02660 0.84 +0.9
2,757,633 - MPMX26_02660 0.84 -0.1
2,757,633 - MPMX26_02660 0.84 +0.3
2,757,667 - MPMX26_02660 0.88 -0.6
2,757,667 - MPMX26_02660 0.88 +0.1
2,757,673 - MPMX26_02660 0.89 +0.3
2,757,673 - MPMX26_02660 0.89 -0.2
2,757,687 - -0.3
2,757,687 - -0.8
2,757,687 - -0.5
2,757,687 - -1.0
2,757,687 - +0.3
2,757,687 - +0.3
2,757,687 - +0.1
2,757,687 - -0.6
2,757,999 + MPMX26_02661 0.19 -1.8
2,758,044 + MPMX26_02661 0.27 -1.5
2,758,044 + MPMX26_02661 0.27 +0.2
2,758,044 + MPMX26_02661 0.27 -0.2
2,758,044 + MPMX26_02661 0.27 -0.1
2,758,122 + MPMX26_02661 0.40 -0.8
2,758,122 + MPMX26_02661 0.40 -0.4
2,758,145 + MPMX26_02661 0.44 -0.2
2,758,167 + MPMX26_02661 0.47 -1.0
2,758,223 + MPMX26_02661 0.57 -0.3
2,758,223 + MPMX26_02661 0.57 +0.1
2,758,223 + MPMX26_02661 0.57 -0.3
2,758,223 + MPMX26_02661 0.57 -0.6
2,758,223 + MPMX26_02661 0.57 +0.2
2,758,281 + MPMX26_02661 0.66 +0.2
2,758,416 + MPMX26_02661 0.89 +0.2
2,758,418 + MPMX26_02661 0.89 +0.4
2,758,418 + MPMX26_02661 0.89 -0.7
2,758,442 + +0.2
2,758,442 + +0.0
2,758,442 + +0.4
2,758,442 + +0.5
2,758,442 + +0.0
2,758,442 + +0.2
2,758,455 + +0.2
2,758,457 + +0.1
2,758,460 + +0.2
2,758,465 + -0.3
2,758,467 + -0.2
2,758,473 + +0.3
2,758,480 + +0.0
2,758,485 + +0.3
2,758,486 + -0.7
2,758,554 + -0.4
2,758,607 + -0.2
2,758,629 + MPMX26_02662 0.13 +0.5
2,758,629 + MPMX26_02662 0.13 +0.7
2,758,629 + MPMX26_02662 0.13 +0.7
2,758,647 + MPMX26_02662 0.17 -0.5
2,758,657 + MPMX26_02662 0.19 +0.1
2,758,662 + MPMX26_02662 0.20 -0.3
2,758,662 + MPMX26_02662 0.20 +0.5
2,758,662 + MPMX26_02662 0.20 -0.1
2,758,773 + MPMX26_02662 0.41 -0.7
2,758,773 + MPMX26_02662 0.41 -0.6
2,758,773 + MPMX26_02662 0.41 +0.1
2,758,774 + MPMX26_02662 0.41 +0.2
2,758,779 + MPMX26_02662 0.42 -0.3
2,758,779 + MPMX26_02662 0.42 -0.3
2,758,779 + MPMX26_02662 0.42 -0.7
2,758,779 + MPMX26_02662 0.42 -0.8
2,758,779 + MPMX26_02662 0.42 +0.1
2,758,779 + MPMX26_02662 0.42 -0.0
2,758,781 + MPMX26_02662 0.42 -0.1
2,758,801 + MPMX26_02662 0.46 -0.3
2,758,859 + MPMX26_02662 0.57 +0.3
2,758,923 + MPMX26_02662 0.69 +0.0
2,758,923 + MPMX26_02662 0.69 -0.1
2,758,923 + MPMX26_02662 0.69 +0.3
2,758,955 + MPMX26_02662 0.75 +0.5
2,758,983 + MPMX26_02662 0.80 +0.7
2,759,047 + -0.2
2,759,099 + +0.4
2,759,099 + +0.4
2,759,160 - MPMX26_02663 0.14 +0.3
2,759,175 - MPMX26_02663 0.19 +1.4
2,759,238 - MPMX26_02663 0.43 -0.1
2,759,274 - MPMX26_02663 0.57 +0.1
2,759,322 - MPMX26_02663 0.75 +0.1
2,759,333 - MPMX26_02663 0.79 -0.0
2,759,375 - -1.3

Or see this region's nucleotide sequence