Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02614

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02613 and MPMX26_02614 are separated by 177 nucleotidesMPMX26_02614 and MPMX26_02615 are separated by 74 nucleotides MPMX26_02613: MPMX26_02613 - hypothetical protein, at 2,707,145 to 2,708,119 _02613 MPMX26_02614: MPMX26_02614 - hypothetical protein, at 2,708,297 to 2,709,175 _02614 MPMX26_02615: MPMX26_02615 - hypothetical protein, at 2,709,250 to 2,710,245 _02615 Position (kb) 2708 2709 2710Strain fitness (log2 ratio) -2 -1 0 1 2at 2707.516 kb on - strand, within MPMX26_02613at 2707.907 kb on + strand, within MPMX26_02613at 2707.910 kb on - strand, within MPMX26_02613at 2708.587 kb on + strand, within MPMX26_02614at 2708.960 kb on + strand, within MPMX26_02614at 2709.071 kb on - strand, within MPMX26_02614at 2709.373 kb on - strand, within MPMX26_02615at 2709.417 kb on - strand, within MPMX26_02615at 2709.418 kb on - strand, within MPMX26_02615at 2709.443 kb on - strand, within MPMX26_02615at 2709.443 kb on - strand, within MPMX26_02615at 2709.443 kb on - strand, within MPMX26_02615at 2709.735 kb on - strand, within MPMX26_02615at 2709.789 kb on - strand, within MPMX26_02615at 2709.870 kb on - strand, within MPMX26_02615

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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2,707,516 - MPMX26_02613 0.38 -0.3
2,707,907 + MPMX26_02613 0.78 -1.8
2,707,910 - MPMX26_02613 0.78 +1.8
2,708,587 + MPMX26_02614 0.33 -0.8
2,708,960 + MPMX26_02614 0.75 -0.9
2,709,071 - MPMX26_02614 0.88 -0.6
2,709,373 - MPMX26_02615 0.12 -0.3
2,709,417 - MPMX26_02615 0.17 +0.5
2,709,418 - MPMX26_02615 0.17 +0.5
2,709,443 - MPMX26_02615 0.19 -0.1
2,709,443 - MPMX26_02615 0.19 -0.1
2,709,443 - MPMX26_02615 0.19 -0.2
2,709,735 - MPMX26_02615 0.49 -0.8
2,709,789 - MPMX26_02615 0.54 +0.2
2,709,870 - MPMX26_02615 0.62 +2.1

Or see this region's nucleotide sequence