Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02588

Experiment: Urea (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02587 and MPMX26_02588 are separated by 194 nucleotidesMPMX26_02588 and MPMX26_02589 overlap by 4 nucleotides MPMX26_02587: MPMX26_02587 - Histidinol dehydrogenase, at 2,680,944 to 2,682,230 _02587 MPMX26_02588: MPMX26_02588 - ATP phosphoribosyltransferase, at 2,682,425 to 2,683,123 _02588 MPMX26_02589: MPMX26_02589 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 2,683,120 to 2,684,379 _02589 Position (kb) 2682 2683 2684Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 2681.448 kb on - strand, within MPMX26_02587at 2681.448 kb on - strand, within MPMX26_02587at 2681.448 kb on - strand, within MPMX26_02587at 2681.450 kb on - strand, within MPMX26_02587at 2681.450 kb on - strand, within MPMX26_02587at 2681.450 kb on - strand, within MPMX26_02587at 2681.450 kb on - strand, within MPMX26_02587at 2681.450 kb on - strand, within MPMX26_02587at 2681.460 kb on - strand, within MPMX26_02587at 2681.460 kb on - strand, within MPMX26_02587at 2681.460 kb on - strand, within MPMX26_02587at 2681.473 kb on - strand, within MPMX26_02587at 2681.474 kb on - strand, within MPMX26_02587at 2681.479 kb on - strand, within MPMX26_02587at 2681.493 kb on - strand, within MPMX26_02587at 2681.511 kb on - strand, within MPMX26_02587at 2681.511 kb on - strand, within MPMX26_02587at 2681.550 kb on - strand, within MPMX26_02587at 2681.560 kb on - strand, within MPMX26_02587at 2681.565 kb on - strand, within MPMX26_02587at 2681.595 kb on - strand, within MPMX26_02587at 2681.629 kb on - strand, within MPMX26_02587at 2681.635 kb on - strand, within MPMX26_02587at 2681.643 kb on - strand, within MPMX26_02587at 2681.663 kb on - strand, within MPMX26_02587at 2681.693 kb on - strand, within MPMX26_02587at 2681.723 kb on - strand, within MPMX26_02587at 2681.783 kb on - strand, within MPMX26_02587at 2681.807 kb on - strand, within MPMX26_02587at 2681.807 kb on - strand, within MPMX26_02587at 2681.807 kb on - strand, within MPMX26_02587at 2681.807 kb on - strand, within MPMX26_02587at 2681.807 kb on - strand, within MPMX26_02587at 2681.807 kb on - strand, within MPMX26_02587at 2681.807 kb on - strand, within MPMX26_02587at 2681.807 kb on - strand, within MPMX26_02587at 2681.807 kb on - strand, within MPMX26_02587at 2681.807 kb on - strand, within MPMX26_02587at 2681.807 kb on - strand, within MPMX26_02587at 2681.807 kb on - strand, within MPMX26_02587at 2681.812 kb on - strand, within MPMX26_02587at 2681.817 kb on - strand, within MPMX26_02587at 2681.823 kb on - strand, within MPMX26_02587at 2681.823 kb on - strand, within MPMX26_02587at 2681.831 kb on - strand, within MPMX26_02587at 2681.831 kb on - strand, within MPMX26_02587at 2681.848 kb on - strand, within MPMX26_02587at 2681.848 kb on - strand, within MPMX26_02587at 2681.848 kb on - strand, within MPMX26_02587at 2681.848 kb on - strand, within MPMX26_02587at 2681.864 kb on - strand, within MPMX26_02587at 2681.874 kb on - strand, within MPMX26_02587at 2681.910 kb on - strand, within MPMX26_02587at 2681.910 kb on - strand, within MPMX26_02587at 2681.910 kb on - strand, within MPMX26_02587at 2681.910 kb on - strand, within MPMX26_02587at 2681.972 kb on - strand, within MPMX26_02587at 2681.972 kb on - strand, within MPMX26_02587at 2681.972 kb on - strand, within MPMX26_02587at 2681.982 kb on - strand, within MPMX26_02587at 2681.982 kb on - strand, within MPMX26_02587at 2681.982 kb on - strand, within MPMX26_02587at 2682.015 kb on - strand, within MPMX26_02587at 2682.015 kb on - strand, within MPMX26_02587at 2682.019 kb on + strand, within MPMX26_02587at 2682.027 kb on - strand, within MPMX26_02587at 2682.027 kb on - strand, within MPMX26_02587at 2682.027 kb on - strand, within MPMX26_02587at 2682.055 kb on - strand, within MPMX26_02587at 2682.121 kb on - strandat 2682.121 kb on - strandat 2682.126 kb on - strandat 2682.126 kb on - strandat 2682.136 kb on - strandat 2682.136 kb on - strandat 2682.161 kb on - strandat 2682.180 kb on - strandat 2682.240 kb on - strandat 2682.404 kb on - strandat 2682.414 kb on - strandat 2682.414 kb on - strandat 2682.414 kb on - strandat 2682.414 kb on - strandat 2682.414 kb on - strandat 2682.414 kb on - strandat 2682.454 kb on - strandat 2682.467 kb on - strandat 2682.499 kb on - strand, within MPMX26_02588at 2682.521 kb on - strand, within MPMX26_02588at 2682.570 kb on - strand, within MPMX26_02588at 2682.570 kb on - strand, within MPMX26_02588at 2682.570 kb on - strand, within MPMX26_02588at 2682.578 kb on - strand, within MPMX26_02588at 2682.578 kb on - strand, within MPMX26_02588at 2682.593 kb on - strand, within MPMX26_02588at 2682.604 kb on - strand, within MPMX26_02588at 2682.615 kb on - strand, within MPMX26_02588at 2682.627 kb on - strand, within MPMX26_02588at 2682.637 kb on - strand, within MPMX26_02588at 2682.637 kb on - strand, within MPMX26_02588at 2682.654 kb on - strand, within MPMX26_02588at 2682.677 kb on - strand, within MPMX26_02588at 2682.696 kb on - strand, within MPMX26_02588at 2682.696 kb on - strand, within MPMX26_02588at 2682.696 kb on - strand, within MPMX26_02588at 2682.696 kb on - strand, within MPMX26_02588at 2682.701 kb on - strand, within MPMX26_02588at 2682.701 kb on - strand, within MPMX26_02588at 2682.701 kb on - strand, within MPMX26_02588at 2682.701 kb on - strand, within MPMX26_02588at 2682.706 kb on - strand, within MPMX26_02588at 2682.706 kb on - strand, within MPMX26_02588at 2682.706 kb on - strand, within MPMX26_02588at 2682.706 kb on - strand, within MPMX26_02588at 2682.706 kb on - strand, within MPMX26_02588at 2682.706 kb on - strand, within MPMX26_02588at 2682.706 kb on - strand, within MPMX26_02588at 2682.706 kb on - strand, within MPMX26_02588at 2682.762 kb on - strand, within MPMX26_02588at 2682.772 kb on - strand, within MPMX26_02588at 2682.772 kb on - strand, within MPMX26_02588at 2682.785 kb on - strand, within MPMX26_02588at 2682.785 kb on - strand, within MPMX26_02588at 2682.791 kb on - strand, within MPMX26_02588at 2682.822 kb on - strand, within MPMX26_02588at 2682.839 kb on - strand, within MPMX26_02588at 2682.853 kb on - strand, within MPMX26_02588at 2682.859 kb on - strand, within MPMX26_02588at 2682.874 kb on - strand, within MPMX26_02588at 2682.874 kb on - strand, within MPMX26_02588at 2682.874 kb on - strand, within MPMX26_02588at 2682.904 kb on - strand, within MPMX26_02588at 2682.912 kb on - strand, within MPMX26_02588at 2682.912 kb on - strand, within MPMX26_02588at 2682.999 kb on - strand, within MPMX26_02588at 2682.999 kb on - strand, within MPMX26_02588at 2682.999 kb on - strand, within MPMX26_02588at 2682.999 kb on - strand, within MPMX26_02588at 2683.066 kb on - strandat 2683.066 kb on - strandat 2683.066 kb on - strandat 2683.066 kb on - strandat 2683.066 kb on - strandat 2683.082 kb on - strandat 2683.127 kb on - strandat 2683.127 kb on - strandat 2683.141 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
remove
2,681,448 - MPMX26_02587 0.39 -4.2
2,681,448 - MPMX26_02587 0.39 -4.8
2,681,448 - MPMX26_02587 0.39 -2.7
2,681,450 - MPMX26_02587 0.39 -3.5
2,681,450 - MPMX26_02587 0.39 -2.2
2,681,450 - MPMX26_02587 0.39 -5.0
2,681,450 - MPMX26_02587 0.39 -4.7
2,681,450 - MPMX26_02587 0.39 -4.2
2,681,460 - MPMX26_02587 0.40 -4.1
2,681,460 - MPMX26_02587 0.40 -2.4
2,681,460 - MPMX26_02587 0.40 -3.9
2,681,473 - MPMX26_02587 0.41 -4.6
2,681,474 - MPMX26_02587 0.41 -2.6
2,681,479 - MPMX26_02587 0.42 -3.7
2,681,493 - MPMX26_02587 0.43 -1.5
2,681,511 - MPMX26_02587 0.44 -2.6
2,681,511 - MPMX26_02587 0.44 -5.2
2,681,550 - MPMX26_02587 0.47 -3.4
2,681,560 - MPMX26_02587 0.48 -3.2
2,681,565 - MPMX26_02587 0.48 -3.2
2,681,595 - MPMX26_02587 0.51 -4.6
2,681,629 - MPMX26_02587 0.53 -4.9
2,681,635 - MPMX26_02587 0.54 -3.5
2,681,643 - MPMX26_02587 0.54 -0.6
2,681,663 - MPMX26_02587 0.56 -5.0
2,681,693 - MPMX26_02587 0.58 -4.4
2,681,723 - MPMX26_02587 0.61 -4.0
2,681,783 - MPMX26_02587 0.65 -5.1
2,681,807 - MPMX26_02587 0.67 -4.5
2,681,807 - MPMX26_02587 0.67 -2.3
2,681,807 - MPMX26_02587 0.67 -2.3
2,681,807 - MPMX26_02587 0.67 -3.8
2,681,807 - MPMX26_02587 0.67 -3.9
2,681,807 - MPMX26_02587 0.67 -0.3
2,681,807 - MPMX26_02587 0.67 -4.0
2,681,807 - MPMX26_02587 0.67 -5.0
2,681,807 - MPMX26_02587 0.67 -0.3
2,681,807 - MPMX26_02587 0.67 -1.6
2,681,807 - MPMX26_02587 0.67 -4.5
2,681,807 - MPMX26_02587 0.67 -4.5
2,681,812 - MPMX26_02587 0.67 -3.6
2,681,817 - MPMX26_02587 0.68 -5.5
2,681,823 - MPMX26_02587 0.68 -3.3
2,681,823 - MPMX26_02587 0.68 -3.2
2,681,831 - MPMX26_02587 0.69 -3.1
2,681,831 - MPMX26_02587 0.69 -4.3
2,681,848 - MPMX26_02587 0.70 -4.6
2,681,848 - MPMX26_02587 0.70 -3.1
2,681,848 - MPMX26_02587 0.70 -4.2
2,681,848 - MPMX26_02587 0.70 -2.8
2,681,864 - MPMX26_02587 0.71 -3.8
2,681,874 - MPMX26_02587 0.72 -5.2
2,681,910 - MPMX26_02587 0.75 -2.3
2,681,910 - MPMX26_02587 0.75 -5.6
2,681,910 - MPMX26_02587 0.75 -3.5
2,681,910 - MPMX26_02587 0.75 -5.7
2,681,972 - MPMX26_02587 0.80 -4.9
2,681,972 - MPMX26_02587 0.80 -3.2
2,681,972 - MPMX26_02587 0.80 -5.1
2,681,982 - MPMX26_02587 0.81 -3.5
2,681,982 - MPMX26_02587 0.81 -3.7
2,681,982 - MPMX26_02587 0.81 -4.3
2,682,015 - MPMX26_02587 0.83 -4.8
2,682,015 - MPMX26_02587 0.83 -2.2
2,682,019 + MPMX26_02587 0.84 -1.3
2,682,027 - MPMX26_02587 0.84 -3.3
2,682,027 - MPMX26_02587 0.84 -2.7
2,682,027 - MPMX26_02587 0.84 -1.2
2,682,055 - MPMX26_02587 0.86 -1.9
2,682,121 - -2.3
2,682,121 - -4.7
2,682,126 - -3.9
2,682,126 - -2.1
2,682,136 - -4.1
2,682,136 - -2.2
2,682,161 - -0.3
2,682,180 - -3.3
2,682,240 - -0.8
2,682,404 - +0.8
2,682,414 - +1.0
2,682,414 - +0.4
2,682,414 - -0.8
2,682,414 - -0.4
2,682,414 - +0.3
2,682,414 - -0.3
2,682,454 - -1.7
2,682,467 - -3.6
2,682,499 - MPMX26_02588 0.11 -4.6
2,682,521 - MPMX26_02588 0.14 -5.2
2,682,570 - MPMX26_02588 0.21 -3.1
2,682,570 - MPMX26_02588 0.21 -4.5
2,682,570 - MPMX26_02588 0.21 -3.1
2,682,578 - MPMX26_02588 0.22 -5.0
2,682,578 - MPMX26_02588 0.22 -3.7
2,682,593 - MPMX26_02588 0.24 -4.7
2,682,604 - MPMX26_02588 0.26 -3.0
2,682,615 - MPMX26_02588 0.27 -4.9
2,682,627 - MPMX26_02588 0.29 -2.9
2,682,637 - MPMX26_02588 0.30 -5.2
2,682,637 - MPMX26_02588 0.30 -4.8
2,682,654 - MPMX26_02588 0.33 -5.2
2,682,677 - MPMX26_02588 0.36 -4.6
2,682,696 - MPMX26_02588 0.39 -2.7
2,682,696 - MPMX26_02588 0.39 -3.7
2,682,696 - MPMX26_02588 0.39 -2.5
2,682,696 - MPMX26_02588 0.39 -3.9
2,682,701 - MPMX26_02588 0.39 -3.9
2,682,701 - MPMX26_02588 0.39 -5.7
2,682,701 - MPMX26_02588 0.39 -4.9
2,682,701 - MPMX26_02588 0.39 -3.4
2,682,706 - MPMX26_02588 0.40 -3.8
2,682,706 - MPMX26_02588 0.40 -3.5
2,682,706 - MPMX26_02588 0.40 -3.3
2,682,706 - MPMX26_02588 0.40 -4.4
2,682,706 - MPMX26_02588 0.40 -4.0
2,682,706 - MPMX26_02588 0.40 -4.9
2,682,706 - MPMX26_02588 0.40 -4.3
2,682,706 - MPMX26_02588 0.40 -4.4
2,682,762 - MPMX26_02588 0.48 -4.5
2,682,772 - MPMX26_02588 0.50 -2.3
2,682,772 - MPMX26_02588 0.50 -5.5
2,682,785 - MPMX26_02588 0.52 -5.2
2,682,785 - MPMX26_02588 0.52 -5.0
2,682,791 - MPMX26_02588 0.52 -4.5
2,682,822 - MPMX26_02588 0.57 -4.8
2,682,839 - MPMX26_02588 0.59 -5.6
2,682,853 - MPMX26_02588 0.61 -4.6
2,682,859 - MPMX26_02588 0.62 -4.3
2,682,874 - MPMX26_02588 0.64 -4.4
2,682,874 - MPMX26_02588 0.64 -5.4
2,682,874 - MPMX26_02588 0.64 -4.7
2,682,904 - MPMX26_02588 0.69 -4.0
2,682,912 - MPMX26_02588 0.70 -3.7
2,682,912 - MPMX26_02588 0.70 -3.5
2,682,999 - MPMX26_02588 0.82 -4.7
2,682,999 - MPMX26_02588 0.82 -4.3
2,682,999 - MPMX26_02588 0.82 -3.7
2,682,999 - MPMX26_02588 0.82 -4.2
2,683,066 - -5.6
2,683,066 - -5.1
2,683,066 - -4.7
2,683,066 - -4.3
2,683,066 - -3.8
2,683,082 - -2.0
2,683,127 - -3.4
2,683,127 - +0.1
2,683,141 - -3.1

Or see this region's nucleotide sequence