Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02480

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02479 and MPMX26_02480 are separated by 792 nucleotidesMPMX26_02480 and MPMX26_02481 are separated by 70 nucleotides MPMX26_02479: MPMX26_02479 - hypothetical protein, at 2,563,578 to 2,564,261 _02479 MPMX26_02480: MPMX26_02480 - hypothetical protein, at 2,565,054 to 2,565,596 _02480 MPMX26_02481: MPMX26_02481 - 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming), at 2,565,667 to 2,568,273 _02481 Position (kb) 2565 2566Strain fitness (log2 ratio) -2 -1 0 1at 2564.115 kb on - strand, within MPMX26_02479at 2564.417 kb on - strandat 2564.428 kb on - strandat 2564.471 kb on - strandat 2564.471 kb on - strandat 2564.500 kb on - strandat 2564.592 kb on - strandat 2565.214 kb on - strand, within MPMX26_02480at 2565.721 kb on - strandat 2565.831 kb on - strandat 2565.870 kb on - strandat 2565.870 kb on - strandat 2565.870 kb on - strandat 2565.870 kb on - strandat 2565.870 kb on - strandat 2565.898 kb on - strandat 2565.940 kb on - strand, within MPMX26_02481at 2566.011 kb on - strand, within MPMX26_02481at 2566.017 kb on - strand, within MPMX26_02481at 2566.264 kb on - strand, within MPMX26_02481at 2566.270 kb on - strand, within MPMX26_02481at 2566.308 kb on - strand, within MPMX26_02481at 2566.363 kb on - strand, within MPMX26_02481at 2566.363 kb on - strand, within MPMX26_02481

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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2,564,115 - MPMX26_02479 0.79 -0.9
2,564,417 - +0.1
2,564,428 - -0.8
2,564,471 - -0.7
2,564,471 - -0.2
2,564,500 - +0.3
2,564,592 - -0.1
2,565,214 - MPMX26_02480 0.29 -0.1
2,565,721 - -0.0
2,565,831 - -2.3
2,565,870 - -1.6
2,565,870 - -0.3
2,565,870 - -1.5
2,565,870 - -1.2
2,565,870 - -0.9
2,565,898 - -1.2
2,565,940 - MPMX26_02481 0.10 -0.3
2,566,011 - MPMX26_02481 0.13 +1.2
2,566,017 - MPMX26_02481 0.13 -1.5
2,566,264 - MPMX26_02481 0.23 -0.6
2,566,270 - MPMX26_02481 0.23 -2.3
2,566,308 - MPMX26_02481 0.25 -0.6
2,566,363 - MPMX26_02481 0.27 -1.4
2,566,363 - MPMX26_02481 0.27 -0.1

Or see this region's nucleotide sequence