Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02281

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02279 and MPMX26_02280 are separated by 81 nucleotidesMPMX26_02280 and MPMX26_02281 are separated by 20 nucleotidesMPMX26_02281 and MPMX26_02282 are separated by 12 nucleotidesMPMX26_02282 and MPMX26_02283 are separated by 74 nucleotides MPMX26_02279: MPMX26_02279 - hypothetical protein, at 2,350,875 to 2,351,570 _02279 MPMX26_02280: MPMX26_02280 - hypothetical protein, at 2,351,652 to 2,352,056 _02280 MPMX26_02281: MPMX26_02281 - Penicillin-binding protein activator LpoA, at 2,352,077 to 2,353,027 _02281 MPMX26_02282: MPMX26_02282 - Ribosomal RNA small subunit methyltransferase I, at 2,353,040 to 2,353,882 _02282 MPMX26_02283: MPMX26_02283 - hypothetical protein, at 2,353,957 to 2,354,217 _02283 Position (kb) 2352 2353 2354Strain fitness (log2 ratio) -1 0 1at 2351.102 kb on - strand, within MPMX26_02279at 2351.104 kb on - strand, within MPMX26_02279at 2351.125 kb on - strand, within MPMX26_02279at 2351.135 kb on - strand, within MPMX26_02279at 2351.135 kb on - strand, within MPMX26_02279at 2351.135 kb on - strand, within MPMX26_02279at 2351.135 kb on - strand, within MPMX26_02279at 2351.135 kb on - strand, within MPMX26_02279at 2351.135 kb on - strand, within MPMX26_02279at 2351.135 kb on - strand, within MPMX26_02279at 2351.137 kb on - strand, within MPMX26_02279at 2351.140 kb on - strand, within MPMX26_02279at 2351.140 kb on - strand, within MPMX26_02279at 2351.150 kb on - strand, within MPMX26_02279at 2351.210 kb on - strand, within MPMX26_02279at 2351.221 kb on - strand, within MPMX26_02279at 2351.221 kb on - strand, within MPMX26_02279at 2351.245 kb on - strand, within MPMX26_02279at 2351.265 kb on - strand, within MPMX26_02279at 2351.265 kb on - strand, within MPMX26_02279at 2351.339 kb on - strand, within MPMX26_02279at 2351.383 kb on - strand, within MPMX26_02279at 2351.428 kb on - strand, within MPMX26_02279at 2351.476 kb on - strand, within MPMX26_02279at 2351.480 kb on - strand, within MPMX26_02279at 2351.545 kb on - strandat 2351.570 kb on - strandat 2351.580 kb on - strandat 2352.166 kb on - strandat 2352.269 kb on + strand, within MPMX26_02281at 2352.574 kb on - strand, within MPMX26_02281at 2352.679 kb on - strand, within MPMX26_02281at 2353.034 kb on + strandat 2353.036 kb on + strandat 2353.127 kb on + strand, within MPMX26_02282at 2353.127 kb on + strand, within MPMX26_02282at 2353.127 kb on + strand, within MPMX26_02282at 2353.225 kb on + strand, within MPMX26_02282at 2353.262 kb on + strand, within MPMX26_02282at 2353.262 kb on + strand, within MPMX26_02282at 2353.262 kb on + strand, within MPMX26_02282at 2353.274 kb on + strand, within MPMX26_02282at 2353.279 kb on + strand, within MPMX26_02282at 2353.279 kb on + strand, within MPMX26_02282at 2353.279 kb on + strand, within MPMX26_02282at 2353.288 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.327 kb on + strand, within MPMX26_02282at 2353.327 kb on + strand, within MPMX26_02282at 2353.375 kb on + strand, within MPMX26_02282at 2353.396 kb on + strand, within MPMX26_02282at 2353.409 kb on + strand, within MPMX26_02282at 2353.414 kb on + strand, within MPMX26_02282at 2353.535 kb on + strand, within MPMX26_02282at 2353.535 kb on + strand, within MPMX26_02282at 2353.552 kb on + strand, within MPMX26_02282at 2353.571 kb on + strand, within MPMX26_02282at 2353.642 kb on + strand, within MPMX26_02282at 2353.688 kb on + strand, within MPMX26_02282at 2353.705 kb on + strand, within MPMX26_02282at 2353.787 kb on + strand, within MPMX26_02282at 2353.787 kb on + strand, within MPMX26_02282at 2353.944 kb on - strandat 2353.944 kb on - strandat 2353.944 kb on - strandat 2353.949 kb on - strandat 2353.949 kb on - strandat 2353.963 kb on - strandat 2353.968 kb on - strandat 2353.971 kb on - strandat 2353.971 kb on - strandat 2353.977 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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2,351,102 - MPMX26_02279 0.33 -0.6
2,351,104 - MPMX26_02279 0.33 -0.8
2,351,125 - MPMX26_02279 0.36 -0.5
2,351,135 - MPMX26_02279 0.37 -0.3
2,351,135 - MPMX26_02279 0.37 -0.3
2,351,135 - MPMX26_02279 0.37 -0.6
2,351,135 - MPMX26_02279 0.37 -0.7
2,351,135 - MPMX26_02279 0.37 -0.5
2,351,135 - MPMX26_02279 0.37 -0.7
2,351,135 - MPMX26_02279 0.37 -0.3
2,351,137 - MPMX26_02279 0.38 +0.0
2,351,140 - MPMX26_02279 0.38 -0.5
2,351,140 - MPMX26_02279 0.38 -0.2
2,351,150 - MPMX26_02279 0.40 -0.5
2,351,210 - MPMX26_02279 0.48 +0.6
2,351,221 - MPMX26_02279 0.50 -0.4
2,351,221 - MPMX26_02279 0.50 -0.2
2,351,245 - MPMX26_02279 0.53 -0.4
2,351,265 - MPMX26_02279 0.56 -1.3
2,351,265 - MPMX26_02279 0.56 -0.4
2,351,339 - MPMX26_02279 0.67 -0.2
2,351,383 - MPMX26_02279 0.73 -1.4
2,351,428 - MPMX26_02279 0.79 +0.1
2,351,476 - MPMX26_02279 0.86 +0.0
2,351,480 - MPMX26_02279 0.87 -0.4
2,351,545 - -0.4
2,351,570 - -0.5
2,351,580 - +0.5
2,352,166 - +0.0
2,352,269 + MPMX26_02281 0.20 -0.9
2,352,574 - MPMX26_02281 0.52 +0.5
2,352,679 - MPMX26_02281 0.63 -1.2
2,353,034 + +0.5
2,353,036 + +0.3
2,353,127 + MPMX26_02282 0.10 +0.3
2,353,127 + MPMX26_02282 0.10 -0.4
2,353,127 + MPMX26_02282 0.10 -1.1
2,353,225 + MPMX26_02282 0.22 +0.3
2,353,262 + MPMX26_02282 0.26 -0.6
2,353,262 + MPMX26_02282 0.26 +0.7
2,353,262 + MPMX26_02282 0.26 +0.4
2,353,274 + MPMX26_02282 0.28 +0.6
2,353,279 + MPMX26_02282 0.28 -0.6
2,353,279 + MPMX26_02282 0.28 +0.4
2,353,279 + MPMX26_02282 0.28 +0.1
2,353,288 + MPMX26_02282 0.29 -0.7
2,353,298 + MPMX26_02282 0.31 -0.2
2,353,298 + MPMX26_02282 0.31 -0.2
2,353,298 + MPMX26_02282 0.31 +0.1
2,353,298 + MPMX26_02282 0.31 -0.3
2,353,298 + MPMX26_02282 0.31 +0.3
2,353,298 + MPMX26_02282 0.31 -0.6
2,353,298 + MPMX26_02282 0.31 -0.2
2,353,298 + MPMX26_02282 0.31 -0.5
2,353,298 + MPMX26_02282 0.31 -0.5
2,353,298 + MPMX26_02282 0.31 +0.5
2,353,298 + MPMX26_02282 0.31 -0.0
2,353,298 + MPMX26_02282 0.31 -0.8
2,353,298 + MPMX26_02282 0.31 -0.1
2,353,298 + MPMX26_02282 0.31 +0.1
2,353,298 + MPMX26_02282 0.31 +0.1
2,353,327 + MPMX26_02282 0.34 +0.1
2,353,327 + MPMX26_02282 0.34 -0.9
2,353,375 + MPMX26_02282 0.40 +0.5
2,353,396 + MPMX26_02282 0.42 +0.5
2,353,409 + MPMX26_02282 0.44 -1.7
2,353,414 + MPMX26_02282 0.44 -0.1
2,353,535 + MPMX26_02282 0.59 +0.0
2,353,535 + MPMX26_02282 0.59 +0.5
2,353,552 + MPMX26_02282 0.61 +1.0
2,353,571 + MPMX26_02282 0.63 +0.6
2,353,642 + MPMX26_02282 0.71 +0.1
2,353,688 + MPMX26_02282 0.77 -0.3
2,353,705 + MPMX26_02282 0.79 +0.0
2,353,787 + MPMX26_02282 0.89 +0.2
2,353,787 + MPMX26_02282 0.89 -0.9
2,353,944 - -1.0
2,353,944 - -0.4
2,353,944 - -0.3
2,353,949 - -0.4
2,353,949 - -0.6
2,353,963 - +1.1
2,353,968 - -0.4
2,353,971 - -0.4
2,353,971 - -0.3
2,353,977 - -0.5

Or see this region's nucleotide sequence