Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02108 and MPMX26_02109 are separated by 286 nucleotides MPMX26_02109 and MPMX26_02110 are separated by 271 nucleotides MPMX26_02110 and MPMX26_02111 are separated by 158 nucleotides
MPMX26_02108: MPMX26_02108 - Membrane-bound lytic murein transglycosylase B, at 2,162,145 to 2,163,146
_02108
MPMX26_02109: MPMX26_02109 - Endolytic peptidoglycan transglycosylase RlpA, at 2,163,433 to 2,164,044
_02109
MPMX26_02110: MPMX26_02110 - hypothetical protein, at 2,164,316 to 2,164,768
_02110
MPMX26_02111: MPMX26_02111 - Elongation factor Ts, at 2,164,927 to 2,165,802
_02111
Position (kb)
2163
2164
2165 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2162.478 kb on + strand, within MPMX26_02108 at 2162.478 kb on + strand, within MPMX26_02108 at 2162.486 kb on + strand, within MPMX26_02108 at 2162.486 kb on + strand, within MPMX26_02108 at 2162.495 kb on + strand, within MPMX26_02108 at 2162.495 kb on + strand, within MPMX26_02108 at 2162.531 kb on + strand, within MPMX26_02108 at 2162.874 kb on + strand, within MPMX26_02108 at 2162.889 kb on + strand, within MPMX26_02108 at 2162.889 kb on + strand, within MPMX26_02108 at 2162.899 kb on + strand, within MPMX26_02108 at 2162.918 kb on + strand, within MPMX26_02108 at 2162.918 kb on + strand, within MPMX26_02108 at 2162.924 kb on + strand, within MPMX26_02108 at 2162.924 kb on + strand, within MPMX26_02108 at 2162.924 kb on + strand, within MPMX26_02108 at 2162.930 kb on + strand, within MPMX26_02108 at 2162.966 kb on + strand, within MPMX26_02108 at 2162.966 kb on + strand, within MPMX26_02108 at 2162.966 kb on + strand, within MPMX26_02108 at 2162.966 kb on + strand, within MPMX26_02108 at 2162.966 kb on + strand, within MPMX26_02108 at 2162.966 kb on + strand, within MPMX26_02108 at 2163.089 kb on + strand at 2163.368 kb on + strand at 2163.404 kb on + strand at 2163.409 kb on + strand at 2163.409 kb on + strand at 2163.409 kb on + strand at 2163.425 kb on + strand at 2163.467 kb on + strand at 2163.467 kb on + strand at 2163.477 kb on + strand at 2163.477 kb on + strand at 2163.505 kb on + strand, within MPMX26_02109 at 2163.559 kb on + strand, within MPMX26_02109 at 2163.569 kb on + strand, within MPMX26_02109 at 2163.574 kb on + strand, within MPMX26_02109 at 2163.580 kb on + strand, within MPMX26_02109 at 2163.580 kb on + strand, within MPMX26_02109 at 2163.596 kb on + strand, within MPMX26_02109 at 2163.603 kb on + strand, within MPMX26_02109 at 2163.611 kb on + strand, within MPMX26_02109 at 2163.627 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.723 kb on + strand, within MPMX26_02109 at 2163.733 kb on + strand, within MPMX26_02109 at 2163.905 kb on + strand, within MPMX26_02109 at 2163.946 kb on + strand, within MPMX26_02109 at 2163.957 kb on + strand, within MPMX26_02109 at 2163.970 kb on + strand, within MPMX26_02109 at 2164.021 kb on + strand at 2164.030 kb on + strand at 2164.040 kb on + strand at 2164.057 kb on + strand at 2164.315 kb on + strand at 2164.436 kb on + strand, within MPMX26_02110 at 2164.571 kb on + strand, within MPMX26_02110 at 2164.571 kb on + strand, within MPMX26_02110 at 2164.932 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 2,162,478 + MPMX26_02108 0.33 -0.1 2,162,478 + MPMX26_02108 0.33 +0.3 2,162,486 + MPMX26_02108 0.34 +0.5 2,162,486 + MPMX26_02108 0.34 +1.1 2,162,495 + MPMX26_02108 0.35 +0.6 2,162,495 + MPMX26_02108 0.35 -0.1 2,162,531 + MPMX26_02108 0.39 +0.5 2,162,874 + MPMX26_02108 0.73 +0.3 2,162,889 + MPMX26_02108 0.74 +0.3 2,162,889 + MPMX26_02108 0.74 +0.1 2,162,899 + MPMX26_02108 0.75 +0.4 2,162,918 + MPMX26_02108 0.77 +1.1 2,162,918 + MPMX26_02108 0.77 +0.4 2,162,924 + MPMX26_02108 0.78 -0.2 2,162,924 + MPMX26_02108 0.78 -0.1 2,162,924 + MPMX26_02108 0.78 -0.3 2,162,930 + MPMX26_02108 0.78 +1.2 2,162,966 + MPMX26_02108 0.82 -0.1 2,162,966 + MPMX26_02108 0.82 +1.2 2,162,966 + MPMX26_02108 0.82 +0.5 2,162,966 + MPMX26_02108 0.82 -0.0 2,162,966 + MPMX26_02108 0.82 -0.7 2,162,966 + MPMX26_02108 0.82 +0.3 2,163,089 + +0.8 2,163,368 + -0.2 2,163,404 + -0.5 2,163,409 + +0.8 2,163,409 + +0.3 2,163,409 + -0.1 2,163,425 + -0.9 2,163,467 + -2.5 2,163,467 + -1.1 2,163,477 + -2.1 2,163,477 + -2.6 2,163,505 + MPMX26_02109 0.12 +0.7 2,163,559 + MPMX26_02109 0.21 -0.7 2,163,569 + MPMX26_02109 0.22 -1.6 2,163,574 + MPMX26_02109 0.23 -3.2 2,163,580 + MPMX26_02109 0.24 -1.6 2,163,580 + MPMX26_02109 0.24 -0.8 2,163,596 + MPMX26_02109 0.27 -2.2 2,163,603 + MPMX26_02109 0.28 -2.2 2,163,611 + MPMX26_02109 0.29 -0.9 2,163,627 + MPMX26_02109 0.32 -2.6 2,163,723 + MPMX26_02109 0.47 -0.0 2,163,723 + MPMX26_02109 0.47 -0.5 2,163,723 + MPMX26_02109 0.47 -0.3 2,163,723 + MPMX26_02109 0.47 -0.2 2,163,723 + MPMX26_02109 0.47 -1.5 2,163,723 + MPMX26_02109 0.47 -0.9 2,163,723 + MPMX26_02109 0.47 -1.1 2,163,723 + MPMX26_02109 0.47 +0.6 2,163,723 + MPMX26_02109 0.47 -1.1 2,163,723 + MPMX26_02109 0.47 -0.4 2,163,723 + MPMX26_02109 0.47 -1.0 2,163,723 + MPMX26_02109 0.47 -0.1 2,163,723 + MPMX26_02109 0.47 -1.4 2,163,723 + MPMX26_02109 0.47 -0.6 2,163,723 + MPMX26_02109 0.47 -0.8 2,163,723 + MPMX26_02109 0.47 +0.1 2,163,733 + MPMX26_02109 0.49 -0.5 2,163,905 + MPMX26_02109 0.77 -0.3 2,163,946 + MPMX26_02109 0.84 +0.2 2,163,957 + MPMX26_02109 0.86 -0.7 2,163,970 + MPMX26_02109 0.88 +1.3 2,164,021 + -0.5 2,164,030 + -0.0 2,164,040 + +0.2 2,164,057 + +0.2 2,164,315 + -0.8 2,164,436 + MPMX26_02110 0.26 +0.3 2,164,571 + MPMX26_02110 0.56 +0.9 2,164,571 + MPMX26_02110 0.56 +1.0 2,164,932 - -0.5
Or see this region's nucleotide sequence