Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02060

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02058 and MPMX26_02059 are separated by 123 nucleotidesMPMX26_02059 and MPMX26_02060 are separated by 94 nucleotidesMPMX26_02060 and MPMX26_02061 are separated by 51 nucleotidesMPMX26_02061 and MPMX26_02062 are separated by 189 nucleotides MPMX26_02058: MPMX26_02058 - IS3 family transposase ISAba21, at 2,127,464 to 2,127,763 _02058 MPMX26_02059: MPMX26_02059 - hypothetical protein, at 2,127,887 to 2,128,471 _02059 MPMX26_02060: MPMX26_02060 - hypothetical protein, at 2,128,566 to 2,129,138 _02060 MPMX26_02061: MPMX26_02061 - hypothetical protein, at 2,129,190 to 2,129,498 _02061 MPMX26_02062: MPMX26_02062 - hypothetical protein, at 2,129,688 to 2,130,434 _02062 Position (kb) 2128 2129 2130Strain fitness (log2 ratio) -1 0 1at 2128.635 kb on + strand, within MPMX26_02060at 2129.249 kb on - strand, within MPMX26_02061at 2129.285 kb on - strand, within MPMX26_02061

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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2,128,635 + MPMX26_02060 0.12 -1.5
2,129,249 - MPMX26_02061 0.19 +0.2
2,129,285 - MPMX26_02061 0.31 +0.2

Or see this region's nucleotide sequence